Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03778

Experiment: 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03777 and MPMX20_03778 are separated by 91 nucleotidesMPMX20_03778 and MPMX20_03779 are separated by 49 nucleotides MPMX20_03777: MPMX20_03777 - Fructose-bisphosphate aldolase class 2, at 3,979,788 to 3,980,867 _03777 MPMX20_03778: MPMX20_03778 - Phosphoglycerate kinase, at 3,980,959 to 3,982,122 _03778 MPMX20_03779: MPMX20_03779 - D-erythrose-4-phosphate dehydrogenase, at 3,982,172 to 3,983,191 _03779 Position (kb) 3980 3981 3982 3983Strain fitness (log2 ratio) -1 0 1 2 3 4at 3980.918 kb on - strandat 3982.167 kb on - strandat 3982.253 kb on - strandat 3982.253 kb on - strandat 3982.253 kb on - strandat 3982.383 kb on - strand, within MPMX20_03779at 3982.468 kb on + strand, within MPMX20_03779at 3982.532 kb on + strand, within MPMX20_03779at 3982.557 kb on - strand, within MPMX20_03779at 3982.601 kb on - strand, within MPMX20_03779at 3982.670 kb on - strand, within MPMX20_03779at 3982.694 kb on - strand, within MPMX20_03779at 3982.708 kb on + strand, within MPMX20_03779at 3982.716 kb on - strand, within MPMX20_03779at 3982.716 kb on - strand, within MPMX20_03779at 3982.744 kb on - strand, within MPMX20_03779at 3982.765 kb on + strand, within MPMX20_03779at 3982.848 kb on + strand, within MPMX20_03779at 3982.871 kb on - strand, within MPMX20_03779at 3982.883 kb on + strand, within MPMX20_03779at 3982.891 kb on - strand, within MPMX20_03779at 3982.896 kb on - strand, within MPMX20_03779at 3982.996 kb on - strand, within MPMX20_03779

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,980,918 - +0.7
3,982,167 - -1.1
3,982,253 - -1.6
3,982,253 - -1.2
3,982,253 - -0.2
3,982,383 - MPMX20_03779 0.21 +0.5
3,982,468 + MPMX20_03779 0.29 +0.6
3,982,532 + MPMX20_03779 0.35 +4.6
3,982,557 - MPMX20_03779 0.38 +0.1
3,982,601 - MPMX20_03779 0.42 -1.5
3,982,670 - MPMX20_03779 0.49 +1.1
3,982,694 - MPMX20_03779 0.51 -0.8
3,982,708 + MPMX20_03779 0.53 -0.1
3,982,716 - MPMX20_03779 0.53 +0.5
3,982,716 - MPMX20_03779 0.53 -1.1
3,982,744 - MPMX20_03779 0.56 -0.2
3,982,765 + MPMX20_03779 0.58 +1.5
3,982,848 + MPMX20_03779 0.66 +2.9
3,982,871 - MPMX20_03779 0.69 -0.1
3,982,883 + MPMX20_03779 0.70 +0.0
3,982,891 - MPMX20_03779 0.70 +0.9
3,982,896 - MPMX20_03779 0.71 +0.2
3,982,996 - MPMX20_03779 0.81 -0.7

Or see this region's nucleotide sequence