Experiment: 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03437 and MPMX20_03438 overlap by 4 nucleotides MPMX20_03438 and MPMX20_03439 are separated by 183 nucleotides MPMX20_03439 and MPMX20_03440 are separated by 15 nucleotides
MPMX20_03437: MPMX20_03437 - GTPase Era, at 3,624,246 to 3,625,151
_03437
MPMX20_03438: MPMX20_03438 - Ribonuclease 3, at 3,625,148 to 3,625,867
_03438
MPMX20_03439: MPMX20_03439 - Signal peptidase I, at 3,626,051 to 3,627,025
_03439
MPMX20_03440: MPMX20_03440 - Elongation factor 4, at 3,627,041 to 3,628,840
_03440
Position (kb)
3626
3627
3628 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3625.928 kb on - strand at 3625.934 kb on - strand at 3625.934 kb on - strand at 3625.934 kb on - strand at 3625.934 kb on - strand at 3626.085 kb on - strand at 3626.085 kb on - strand at 3626.085 kb on - strand at 3626.085 kb on - strand at 3626.108 kb on - strand at 3626.118 kb on - strand at 3626.118 kb on - strand at 3627.069 kb on - strand at 3627.227 kb on - strand, within MPMX20_03440 at 3627.369 kb on - strand, within MPMX20_03440 at 3627.406 kb on - strand, within MPMX20_03440 at 3627.568 kb on + strand, within MPMX20_03440 at 3627.574 kb on - strand, within MPMX20_03440 at 3627.590 kb on - strand, within MPMX20_03440 at 3627.624 kb on - strand, within MPMX20_03440 at 3627.624 kb on - strand, within MPMX20_03440 at 3627.624 kb on - strand, within MPMX20_03440 at 3627.624 kb on - strand, within MPMX20_03440 at 3627.742 kb on - strand, within MPMX20_03440 at 3627.779 kb on - strand, within MPMX20_03440 at 3627.839 kb on - strand, within MPMX20_03440 at 3627.933 kb on - strand, within MPMX20_03440 at 3627.933 kb on - strand, within MPMX20_03440 at 3627.949 kb on - strand, within MPMX20_03440 at 3628.024 kb on - strand, within MPMX20_03440
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,625,928 - -1.7 3,625,934 - +0.1 3,625,934 - +1.0 3,625,934 - +0.4 3,625,934 - -0.6 3,626,085 - -0.2 3,626,085 - +2.4 3,626,085 - +1.2 3,626,085 - -0.5 3,626,108 - -0.3 3,626,118 - -0.6 3,626,118 - -2.3 3,627,069 - -0.8 3,627,227 - MPMX20_03440 0.10 -2.2 3,627,369 - MPMX20_03440 0.18 -3.1 3,627,406 - MPMX20_03440 0.20 +1.0 3,627,568 + MPMX20_03440 0.29 +2.0 3,627,574 - MPMX20_03440 0.30 -0.3 3,627,590 - MPMX20_03440 0.30 -1.5 3,627,624 - MPMX20_03440 0.32 -0.2 3,627,624 - MPMX20_03440 0.32 -0.8 3,627,624 - MPMX20_03440 0.32 -1.0 3,627,624 - MPMX20_03440 0.32 +1.0 3,627,742 - MPMX20_03440 0.39 -0.6 3,627,779 - MPMX20_03440 0.41 -0.8 3,627,839 - MPMX20_03440 0.44 +1.0 3,627,933 - MPMX20_03440 0.50 +0.4 3,627,933 - MPMX20_03440 0.50 -1.2 3,627,949 - MPMX20_03440 0.50 -0.6 3,628,024 - MPMX20_03440 0.55 -0.3
Or see this region's nucleotide sequence