Experiment: 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01369 and MPMX20_01370 are separated by 35 nucleotides MPMX20_01370 and MPMX20_01371 are separated by 9 nucleotides MPMX20_01371 and MPMX20_01372 are separated by 161 nucleotides
MPMX20_01369: MPMX20_01369 - Tol-Pal system protein TolB, at 1,435,873 to 1,437,165
_01369
MPMX20_01370: MPMX20_01370 - Peptidoglycan-associated lipoprotein, at 1,437,201 to 1,437,722
_01370
MPMX20_01371: MPMX20_01371 - Cell division coordinator CpoB, at 1,437,732 to 1,438,526
_01371
MPMX20_01372: MPMX20_01372 - tRNA-Lys, at 1,438,688 to 1,438,763
_01372
Position (kb)
1437
1438 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1436.308 kb on - strand, within MPMX20_01369 at 1436.353 kb on + strand, within MPMX20_01369 at 1436.388 kb on + strand, within MPMX20_01369 at 1436.388 kb on + strand, within MPMX20_01369 at 1436.391 kb on - strand, within MPMX20_01369 at 1436.396 kb on - strand, within MPMX20_01369 at 1436.411 kb on - strand, within MPMX20_01369 at 1436.426 kb on - strand, within MPMX20_01369 at 1436.456 kb on - strand, within MPMX20_01369 at 1436.478 kb on + strand, within MPMX20_01369 at 1436.490 kb on - strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.512 kb on - strand, within MPMX20_01369 at 1436.512 kb on - strand, within MPMX20_01369 at 1436.545 kb on + strand, within MPMX20_01369 at 1436.610 kb on - strand, within MPMX20_01369 at 1436.658 kb on + strand, within MPMX20_01369 at 1436.666 kb on - strand, within MPMX20_01369 at 1436.680 kb on - strand, within MPMX20_01369 at 1436.839 kb on + strand, within MPMX20_01369 at 1436.862 kb on - strand, within MPMX20_01369 at 1436.892 kb on - strand, within MPMX20_01369 at 1436.921 kb on + strand, within MPMX20_01369 at 1437.042 kb on - strand at 1437.048 kb on - strand at 1437.050 kb on + strand at 1437.065 kb on + strand at 1437.130 kb on - strand at 1437.140 kb on - strand at 1437.140 kb on - strand at 1437.311 kb on + strand, within MPMX20_01370 at 1437.314 kb on - strand, within MPMX20_01370 at 1437.410 kb on + strand, within MPMX20_01370 at 1437.442 kb on + strand, within MPMX20_01370 at 1437.538 kb on + strand, within MPMX20_01370 at 1437.602 kb on + strand, within MPMX20_01370 at 1437.626 kb on + strand, within MPMX20_01370 at 1437.663 kb on + strand, within MPMX20_01370 at 1437.776 kb on + strand at 1437.820 kb on - strand, within MPMX20_01371 at 1437.883 kb on + strand, within MPMX20_01371 at 1438.030 kb on - strand, within MPMX20_01371 at 1438.033 kb on - strand, within MPMX20_01371 at 1438.135 kb on + strand, within MPMX20_01371 at 1438.148 kb on - strand, within MPMX20_01371 at 1438.193 kb on + strand, within MPMX20_01371 at 1438.203 kb on + strand, within MPMX20_01371 at 1438.203 kb on + strand, within MPMX20_01371 at 1438.208 kb on + strand, within MPMX20_01371 at 1438.208 kb on + strand, within MPMX20_01371 at 1438.208 kb on + strand, within MPMX20_01371 at 1438.235 kb on - strand, within MPMX20_01371 at 1438.244 kb on + strand, within MPMX20_01371 at 1438.244 kb on + strand, within MPMX20_01371 at 1438.254 kb on + strand, within MPMX20_01371 at 1438.311 kb on + strand, within MPMX20_01371 at 1438.350 kb on - strand, within MPMX20_01371 at 1438.415 kb on + strand, within MPMX20_01371 at 1438.415 kb on + strand, within MPMX20_01371 at 1438.421 kb on + strand, within MPMX20_01371 at 1438.423 kb on - strand, within MPMX20_01371 at 1438.423 kb on - strand, within MPMX20_01371 at 1438.423 kb on - strand, within MPMX20_01371 at 1438.423 kb on - strand, within MPMX20_01371 at 1438.423 kb on - strand, within MPMX20_01371 at 1438.478 kb on + strand at 1438.560 kb on - strand at 1438.583 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,436,308 - MPMX20_01369 0.34 -1.0 1,436,353 + MPMX20_01369 0.37 -1.5 1,436,388 + MPMX20_01369 0.40 -2.8 1,436,388 + MPMX20_01369 0.40 +0.4 1,436,391 - MPMX20_01369 0.40 +0.0 1,436,396 - MPMX20_01369 0.40 -1.2 1,436,411 - MPMX20_01369 0.42 -0.6 1,436,426 - MPMX20_01369 0.43 -1.2 1,436,456 - MPMX20_01369 0.45 -1.0 1,436,478 + MPMX20_01369 0.47 +0.4 1,436,490 - MPMX20_01369 0.48 -1.0 1,436,504 + MPMX20_01369 0.49 -2.8 1,436,504 + MPMX20_01369 0.49 -0.8 1,436,504 + MPMX20_01369 0.49 +0.4 1,436,504 + MPMX20_01369 0.49 -1.2 1,436,504 + MPMX20_01369 0.49 +0.0 1,436,512 - MPMX20_01369 0.49 +0.4 1,436,512 - MPMX20_01369 0.49 -2.0 1,436,545 + MPMX20_01369 0.52 +0.4 1,436,610 - MPMX20_01369 0.57 +0.2 1,436,658 + MPMX20_01369 0.61 -1.2 1,436,666 - MPMX20_01369 0.61 -2.7 1,436,680 - MPMX20_01369 0.62 -3.4 1,436,839 + MPMX20_01369 0.75 -0.6 1,436,862 - MPMX20_01369 0.76 -1.5 1,436,892 - MPMX20_01369 0.79 +0.0 1,436,921 + MPMX20_01369 0.81 -0.8 1,437,042 - -1.5 1,437,048 - -0.8 1,437,050 + +1.0 1,437,065 + -1.2 1,437,130 - +0.4 1,437,140 - +0.4 1,437,140 - -3.0 1,437,311 + MPMX20_01370 0.21 -0.6 1,437,314 - MPMX20_01370 0.22 -1.2 1,437,410 + MPMX20_01370 0.40 +0.0 1,437,442 + MPMX20_01370 0.46 -2.1 1,437,538 + MPMX20_01370 0.65 -1.3 1,437,602 + MPMX20_01370 0.77 +1.0 1,437,626 + MPMX20_01370 0.81 -2.8 1,437,663 + MPMX20_01370 0.89 -1.0 1,437,776 + -0.6 1,437,820 - MPMX20_01371 0.11 +0.0 1,437,883 + MPMX20_01371 0.19 +0.1 1,438,030 - MPMX20_01371 0.37 -1.5 1,438,033 - MPMX20_01371 0.38 +0.0 1,438,135 + MPMX20_01371 0.51 -1.2 1,438,148 - MPMX20_01371 0.52 -1.1 1,438,193 + MPMX20_01371 0.58 +0.2 1,438,203 + MPMX20_01371 0.59 +0.2 1,438,203 + MPMX20_01371 0.59 -0.7 1,438,208 + MPMX20_01371 0.60 -0.8 1,438,208 + MPMX20_01371 0.60 +1.0 1,438,208 + MPMX20_01371 0.60 -1.3 1,438,235 - MPMX20_01371 0.63 +0.2 1,438,244 + MPMX20_01371 0.64 -0.8 1,438,244 + MPMX20_01371 0.64 +0.4 1,438,254 + MPMX20_01371 0.66 -0.6 1,438,311 + MPMX20_01371 0.73 -0.6 1,438,350 - MPMX20_01371 0.78 -0.2 1,438,415 + MPMX20_01371 0.86 +0.4 1,438,415 + MPMX20_01371 0.86 -1.3 1,438,421 + MPMX20_01371 0.87 -0.7 1,438,423 - MPMX20_01371 0.87 -1.2 1,438,423 - MPMX20_01371 0.87 -0.1 1,438,423 - MPMX20_01371 0.87 -2.0 1,438,423 - MPMX20_01371 0.87 -1.0 1,438,423 - MPMX20_01371 0.87 -1.3 1,438,478 + -0.4 1,438,560 - -1.6 1,438,583 + -1.7
Or see this region's nucleotide sequence