Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01370

Experiment: 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01369 and MPMX20_01370 are separated by 35 nucleotidesMPMX20_01370 and MPMX20_01371 are separated by 9 nucleotidesMPMX20_01371 and MPMX20_01372 are separated by 161 nucleotides MPMX20_01369: MPMX20_01369 - Tol-Pal system protein TolB, at 1,435,873 to 1,437,165 _01369 MPMX20_01370: MPMX20_01370 - Peptidoglycan-associated lipoprotein, at 1,437,201 to 1,437,722 _01370 MPMX20_01371: MPMX20_01371 - Cell division coordinator CpoB, at 1,437,732 to 1,438,526 _01371 MPMX20_01372: MPMX20_01372 - tRNA-Lys, at 1,438,688 to 1,438,763 _01372 Position (kb) 1437 1438Strain fitness (log2 ratio) -3 -2 -1 0 1at 1436.308 kb on - strand, within MPMX20_01369at 1436.353 kb on + strand, within MPMX20_01369at 1436.388 kb on + strand, within MPMX20_01369at 1436.388 kb on + strand, within MPMX20_01369at 1436.391 kb on - strand, within MPMX20_01369at 1436.396 kb on - strand, within MPMX20_01369at 1436.411 kb on - strand, within MPMX20_01369at 1436.426 kb on - strand, within MPMX20_01369at 1436.456 kb on - strand, within MPMX20_01369at 1436.478 kb on + strand, within MPMX20_01369at 1436.490 kb on - strand, within MPMX20_01369at 1436.504 kb on + strand, within MPMX20_01369at 1436.504 kb on + strand, within MPMX20_01369at 1436.504 kb on + strand, within MPMX20_01369at 1436.504 kb on + strand, within MPMX20_01369at 1436.504 kb on + strand, within MPMX20_01369at 1436.512 kb on - strand, within MPMX20_01369at 1436.512 kb on - strand, within MPMX20_01369at 1436.545 kb on + strand, within MPMX20_01369at 1436.610 kb on - strand, within MPMX20_01369at 1436.658 kb on + strand, within MPMX20_01369at 1436.666 kb on - strand, within MPMX20_01369at 1436.680 kb on - strand, within MPMX20_01369at 1436.839 kb on + strand, within MPMX20_01369at 1436.862 kb on - strand, within MPMX20_01369at 1436.892 kb on - strand, within MPMX20_01369at 1436.921 kb on + strand, within MPMX20_01369at 1437.042 kb on - strandat 1437.048 kb on - strandat 1437.050 kb on + strandat 1437.065 kb on + strandat 1437.130 kb on - strandat 1437.140 kb on - strandat 1437.140 kb on - strandat 1437.311 kb on + strand, within MPMX20_01370at 1437.314 kb on - strand, within MPMX20_01370at 1437.410 kb on + strand, within MPMX20_01370at 1437.442 kb on + strand, within MPMX20_01370at 1437.538 kb on + strand, within MPMX20_01370at 1437.602 kb on + strand, within MPMX20_01370at 1437.626 kb on + strand, within MPMX20_01370at 1437.663 kb on + strand, within MPMX20_01370at 1437.776 kb on + strandat 1437.820 kb on - strand, within MPMX20_01371at 1437.883 kb on + strand, within MPMX20_01371at 1438.030 kb on - strand, within MPMX20_01371at 1438.033 kb on - strand, within MPMX20_01371at 1438.135 kb on + strand, within MPMX20_01371at 1438.148 kb on - strand, within MPMX20_01371at 1438.193 kb on + strand, within MPMX20_01371at 1438.203 kb on + strand, within MPMX20_01371at 1438.203 kb on + strand, within MPMX20_01371at 1438.208 kb on + strand, within MPMX20_01371at 1438.208 kb on + strand, within MPMX20_01371at 1438.208 kb on + strand, within MPMX20_01371at 1438.235 kb on - strand, within MPMX20_01371at 1438.244 kb on + strand, within MPMX20_01371at 1438.244 kb on + strand, within MPMX20_01371at 1438.254 kb on + strand, within MPMX20_01371at 1438.311 kb on + strand, within MPMX20_01371at 1438.350 kb on - strand, within MPMX20_01371at 1438.415 kb on + strand, within MPMX20_01371at 1438.415 kb on + strand, within MPMX20_01371at 1438.421 kb on + strand, within MPMX20_01371at 1438.423 kb on - strand, within MPMX20_01371at 1438.423 kb on - strand, within MPMX20_01371at 1438.423 kb on - strand, within MPMX20_01371at 1438.423 kb on - strand, within MPMX20_01371at 1438.423 kb on - strand, within MPMX20_01371at 1438.478 kb on + strandat 1438.560 kb on - strandat 1438.583 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,436,308 - MPMX20_01369 0.34 -1.0
1,436,353 + MPMX20_01369 0.37 -1.5
1,436,388 + MPMX20_01369 0.40 -2.8
1,436,388 + MPMX20_01369 0.40 +0.4
1,436,391 - MPMX20_01369 0.40 +0.0
1,436,396 - MPMX20_01369 0.40 -1.2
1,436,411 - MPMX20_01369 0.42 -0.6
1,436,426 - MPMX20_01369 0.43 -1.2
1,436,456 - MPMX20_01369 0.45 -1.0
1,436,478 + MPMX20_01369 0.47 +0.4
1,436,490 - MPMX20_01369 0.48 -1.0
1,436,504 + MPMX20_01369 0.49 -2.8
1,436,504 + MPMX20_01369 0.49 -0.8
1,436,504 + MPMX20_01369 0.49 +0.4
1,436,504 + MPMX20_01369 0.49 -1.2
1,436,504 + MPMX20_01369 0.49 +0.0
1,436,512 - MPMX20_01369 0.49 +0.4
1,436,512 - MPMX20_01369 0.49 -2.0
1,436,545 + MPMX20_01369 0.52 +0.4
1,436,610 - MPMX20_01369 0.57 +0.2
1,436,658 + MPMX20_01369 0.61 -1.2
1,436,666 - MPMX20_01369 0.61 -2.7
1,436,680 - MPMX20_01369 0.62 -3.4
1,436,839 + MPMX20_01369 0.75 -0.6
1,436,862 - MPMX20_01369 0.76 -1.5
1,436,892 - MPMX20_01369 0.79 +0.0
1,436,921 + MPMX20_01369 0.81 -0.8
1,437,042 - -1.5
1,437,048 - -0.8
1,437,050 + +1.0
1,437,065 + -1.2
1,437,130 - +0.4
1,437,140 - +0.4
1,437,140 - -3.0
1,437,311 + MPMX20_01370 0.21 -0.6
1,437,314 - MPMX20_01370 0.22 -1.2
1,437,410 + MPMX20_01370 0.40 +0.0
1,437,442 + MPMX20_01370 0.46 -2.1
1,437,538 + MPMX20_01370 0.65 -1.3
1,437,602 + MPMX20_01370 0.77 +1.0
1,437,626 + MPMX20_01370 0.81 -2.8
1,437,663 + MPMX20_01370 0.89 -1.0
1,437,776 + -0.6
1,437,820 - MPMX20_01371 0.11 +0.0
1,437,883 + MPMX20_01371 0.19 +0.1
1,438,030 - MPMX20_01371 0.37 -1.5
1,438,033 - MPMX20_01371 0.38 +0.0
1,438,135 + MPMX20_01371 0.51 -1.2
1,438,148 - MPMX20_01371 0.52 -1.1
1,438,193 + MPMX20_01371 0.58 +0.2
1,438,203 + MPMX20_01371 0.59 +0.2
1,438,203 + MPMX20_01371 0.59 -0.7
1,438,208 + MPMX20_01371 0.60 -0.8
1,438,208 + MPMX20_01371 0.60 +1.0
1,438,208 + MPMX20_01371 0.60 -1.3
1,438,235 - MPMX20_01371 0.63 +0.2
1,438,244 + MPMX20_01371 0.64 -0.8
1,438,244 + MPMX20_01371 0.64 +0.4
1,438,254 + MPMX20_01371 0.66 -0.6
1,438,311 + MPMX20_01371 0.73 -0.6
1,438,350 - MPMX20_01371 0.78 -0.2
1,438,415 + MPMX20_01371 0.86 +0.4
1,438,415 + MPMX20_01371 0.86 -1.3
1,438,421 + MPMX20_01371 0.87 -0.7
1,438,423 - MPMX20_01371 0.87 -1.2
1,438,423 - MPMX20_01371 0.87 -0.1
1,438,423 - MPMX20_01371 0.87 -2.0
1,438,423 - MPMX20_01371 0.87 -1.0
1,438,423 - MPMX20_01371 0.87 -1.3
1,438,478 + -0.4
1,438,560 - -1.6
1,438,583 + -1.7

Or see this region's nucleotide sequence