Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04702

Experiment: 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04700 and MPMX20_04701 overlap by 4 nucleotidesMPMX20_04701 and MPMX20_04702 overlap by 1 nucleotidesMPMX20_04702 and MPMX20_04703 overlap by 4 nucleotides MPMX20_04700: MPMX20_04700 - hypothetical protein, at 58,552 to 59,547 _04700 MPMX20_04701: MPMX20_04701 - hypothetical protein, at 59,544 to 60,179 _04701 MPMX20_04702: MPMX20_04702 - hypothetical protein, at 60,179 to 60,613 _04702 MPMX20_04703: MPMX20_04703 - Protein TraC, at 60,610 to 63,201 _04703 Position (kb) 60 61Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 59.210 kb on + strand, within MPMX20_04700at 59.242 kb on + strand, within MPMX20_04700at 59.266 kb on + strand, within MPMX20_04700at 59.266 kb on + strand, within MPMX20_04700at 59.266 kb on + strand, within MPMX20_04700at 59.266 kb on + strand, within MPMX20_04700at 59.269 kb on - strand, within MPMX20_04700at 59.274 kb on - strand, within MPMX20_04700at 59.274 kb on - strand, within MPMX20_04700at 59.274 kb on - strand, within MPMX20_04700at 59.274 kb on - strand, within MPMX20_04700at 59.275 kb on + strand, within MPMX20_04700at 59.291 kb on + strand, within MPMX20_04700at 59.301 kb on + strand, within MPMX20_04700at 59.301 kb on + strand, within MPMX20_04700at 59.304 kb on - strand, within MPMX20_04700at 59.304 kb on - strand, within MPMX20_04700at 59.309 kb on - strand, within MPMX20_04700at 59.309 kb on - strand, within MPMX20_04700at 59.309 kb on - strand, within MPMX20_04700at 59.335 kb on - strand, within MPMX20_04700at 59.335 kb on - strand, within MPMX20_04700at 59.352 kb on + strand, within MPMX20_04700at 59.352 kb on + strand, within MPMX20_04700at 59.352 kb on + strand, within MPMX20_04700at 59.360 kb on - strand, within MPMX20_04700at 59.360 kb on - strand, within MPMX20_04700at 59.360 kb on - strand, within MPMX20_04700at 59.383 kb on - strand, within MPMX20_04700at 59.402 kb on - strand, within MPMX20_04700at 59.489 kb on - strandat 59.517 kb on - strandat 59.517 kb on - strandat 59.521 kb on + strandat 59.565 kb on + strandat 59.586 kb on - strandat 59.639 kb on + strand, within MPMX20_04701at 59.639 kb on - strand, within MPMX20_04701at 59.659 kb on + strand, within MPMX20_04701at 59.664 kb on + strand, within MPMX20_04701at 59.667 kb on - strand, within MPMX20_04701at 59.714 kb on + strand, within MPMX20_04701at 59.727 kb on - strand, within MPMX20_04701at 59.737 kb on - strand, within MPMX20_04701at 59.755 kb on + strand, within MPMX20_04701at 59.843 kb on + strand, within MPMX20_04701at 59.889 kb on + strand, within MPMX20_04701at 59.904 kb on + strand, within MPMX20_04701at 59.918 kb on + strand, within MPMX20_04701at 59.918 kb on + strand, within MPMX20_04701at 59.920 kb on + strand, within MPMX20_04701at 59.923 kb on + strand, within MPMX20_04701at 59.927 kb on + strand, within MPMX20_04701at 59.928 kb on - strand, within MPMX20_04701at 59.935 kb on + strand, within MPMX20_04701at 59.935 kb on + strand, within MPMX20_04701at 59.935 kb on + strand, within MPMX20_04701at 59.935 kb on + strand, within MPMX20_04701at 59.943 kb on - strand, within MPMX20_04701at 59.943 kb on - strand, within MPMX20_04701at 59.943 kb on - strand, within MPMX20_04701at 59.943 kb on - strand, within MPMX20_04701at 59.943 kb on - strand, within MPMX20_04701at 59.952 kb on + strand, within MPMX20_04701at 59.967 kb on - strand, within MPMX20_04701at 59.976 kb on - strand, within MPMX20_04701at 59.977 kb on + strand, within MPMX20_04701at 60.002 kb on + strand, within MPMX20_04701at 60.010 kb on - strand, within MPMX20_04701at 60.018 kb on + strand, within MPMX20_04701at 60.052 kb on - strand, within MPMX20_04701at 60.068 kb on - strand, within MPMX20_04701at 60.068 kb on - strand, within MPMX20_04701at 60.068 kb on - strand, within MPMX20_04701at 60.073 kb on - strand, within MPMX20_04701at 60.084 kb on - strand, within MPMX20_04701at 60.084 kb on - strand, within MPMX20_04701at 60.097 kb on + strand, within MPMX20_04701at 60.097 kb on + strand, within MPMX20_04701at 60.105 kb on - strand, within MPMX20_04701at 60.134 kb on + strandat 60.148 kb on + strandat 60.165 kb on - strandat 60.190 kb on - strandat 60.209 kb on + strandat 60.249 kb on + strand, within MPMX20_04702at 60.257 kb on - strand, within MPMX20_04702at 60.257 kb on - strand, within MPMX20_04702at 60.257 kb on - strand, within MPMX20_04702at 60.257 kb on - strand, within MPMX20_04702at 60.257 kb on - strand, within MPMX20_04702at 60.257 kb on - strand, within MPMX20_04702at 60.259 kb on + strand, within MPMX20_04702at 60.303 kb on + strand, within MPMX20_04702at 60.356 kb on - strand, within MPMX20_04702at 60.361 kb on - strand, within MPMX20_04702at 60.362 kb on - strand, within MPMX20_04702at 60.378 kb on + strand, within MPMX20_04702at 60.388 kb on + strand, within MPMX20_04702at 60.391 kb on - strand, within MPMX20_04702at 60.439 kb on + strand, within MPMX20_04702at 60.446 kb on - strand, within MPMX20_04702at 60.479 kb on + strand, within MPMX20_04702at 60.509 kb on - strand, within MPMX20_04702at 60.530 kb on + strand, within MPMX20_04702at 60.530 kb on + strand, within MPMX20_04702at 60.530 kb on + strand, within MPMX20_04702at 60.538 kb on - strand, within MPMX20_04702at 60.548 kb on + strand, within MPMX20_04702at 60.549 kb on + strand, within MPMX20_04702at 60.629 kb on - strandat 60.629 kb on - strandat 60.681 kb on - strandat 60.705 kb on + strandat 60.741 kb on + strandat 60.746 kb on + strandat 60.749 kb on - strandat 60.756 kb on + strandat 60.756 kb on + strandat 60.771 kb on + strandat 60.816 kb on + strandat 60.816 kb on + strandat 60.816 kb on + strandat 60.816 kb on + strandat 60.816 kb on + strandat 60.816 kb on + strandat 60.816 kb on + strandat 60.824 kb on - strandat 60.824 kb on - strandat 60.824 kb on - strandat 60.824 kb on - strandat 60.824 kb on - strandat 60.824 kb on - strandat 60.824 kb on - strandat 60.827 kb on - strandat 60.832 kb on + strandat 60.867 kb on - strandat 60.891 kb on + strand, within MPMX20_04703at 60.891 kb on + strand, within MPMX20_04703at 60.891 kb on + strand, within MPMX20_04703at 60.899 kb on - strand, within MPMX20_04703at 60.901 kb on + strand, within MPMX20_04703at 60.901 kb on + strand, within MPMX20_04703at 60.906 kb on + strand, within MPMX20_04703at 60.906 kb on + strand, within MPMX20_04703at 60.906 kb on + strand, within MPMX20_04703at 60.906 kb on + strand, within MPMX20_04703at 60.909 kb on - strand, within MPMX20_04703at 60.909 kb on - strand, within MPMX20_04703at 60.909 kb on - strand, within MPMX20_04703at 60.909 kb on - strand, within MPMX20_04703at 60.913 kb on - strand, within MPMX20_04703at 60.913 kb on - strand, within MPMX20_04703at 60.913 kb on - strand, within MPMX20_04703at 60.924 kb on - strand, within MPMX20_04703at 60.926 kb on + strand, within MPMX20_04703at 60.936 kb on + strand, within MPMX20_04703at 60.937 kb on + strand, within MPMX20_04703at 60.955 kb on - strand, within MPMX20_04703at 60.959 kb on + strand, within MPMX20_04703at 60.959 kb on + strand, within MPMX20_04703at 60.959 kb on + strand, within MPMX20_04703at 60.959 kb on + strand, within MPMX20_04703at 60.959 kb on + strand, within MPMX20_04703at 60.959 kb on + strand, within MPMX20_04703at 60.967 kb on - strand, within MPMX20_04703at 60.967 kb on - strand, within MPMX20_04703at 60.967 kb on - strand, within MPMX20_04703at 61.031 kb on - strand, within MPMX20_04703at 61.058 kb on + strand, within MPMX20_04703at 61.116 kb on + strand, within MPMX20_04703at 61.124 kb on - strand, within MPMX20_04703at 61.144 kb on - strand, within MPMX20_04703at 61.144 kb on - strand, within MPMX20_04703at 61.146 kb on + strand, within MPMX20_04703at 61.146 kb on + strand, within MPMX20_04703at 61.154 kb on - strand, within MPMX20_04703at 61.154 kb on - strand, within MPMX20_04703at 61.154 kb on - strand, within MPMX20_04703at 61.154 kb on - strand, within MPMX20_04703at 61.221 kb on + strand, within MPMX20_04703at 61.221 kb on + strand, within MPMX20_04703at 61.221 kb on + strand, within MPMX20_04703at 61.221 kb on + strand, within MPMX20_04703at 61.221 kb on + strand, within MPMX20_04703at 61.221 kb on + strand, within MPMX20_04703at 61.226 kb on + strand, within MPMX20_04703at 61.229 kb on - strand, within MPMX20_04703at 61.229 kb on - strand, within MPMX20_04703at 61.229 kb on - strand, within MPMX20_04703at 61.229 kb on - strand, within MPMX20_04703at 61.229 kb on - strand, within MPMX20_04703at 61.229 kb on - strand, within MPMX20_04703at 61.248 kb on + strand, within MPMX20_04703at 61.256 kb on - strand, within MPMX20_04703at 61.256 kb on - strand, within MPMX20_04703at 61.325 kb on + strand, within MPMX20_04703at 61.325 kb on + strand, within MPMX20_04703at 61.325 kb on - strand, within MPMX20_04703at 61.333 kb on - strand, within MPMX20_04703at 61.334 kb on + strand, within MPMX20_04703at 61.473 kb on + strand, within MPMX20_04703at 61.479 kb on - strand, within MPMX20_04703at 61.481 kb on - strand, within MPMX20_04703at 61.481 kb on - strand, within MPMX20_04703at 61.505 kb on + strand, within MPMX20_04703at 61.505 kb on + strand, within MPMX20_04703at 61.553 kb on + strand, within MPMX20_04703at 61.555 kb on + strand, within MPMX20_04703at 61.556 kb on - strand, within MPMX20_04703at 61.570 kb on - strand, within MPMX20_04703

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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59,210 + MPMX20_04700 0.66 -1.8
59,242 + MPMX20_04700 0.69 +2.4
59,266 + MPMX20_04700 0.72 +0.9
59,266 + MPMX20_04700 0.72 +1.7
59,266 + MPMX20_04700 0.72 -0.9
59,266 + MPMX20_04700 0.72 +0.1
59,269 - MPMX20_04700 0.72 +1.4
59,274 - MPMX20_04700 0.72 -1.2
59,274 - MPMX20_04700 0.72 +1.6
59,274 - MPMX20_04700 0.72 -0.5
59,274 - MPMX20_04700 0.72 -1.4
59,275 + MPMX20_04700 0.73 -1.4
59,291 + MPMX20_04700 0.74 -1.9
59,301 + MPMX20_04700 0.75 -1.1
59,301 + MPMX20_04700 0.75 -0.5
59,304 - MPMX20_04700 0.76 -1.7
59,304 - MPMX20_04700 0.76 -3.8
59,309 - MPMX20_04700 0.76 -0.9
59,309 - MPMX20_04700 0.76 -1.5
59,309 - MPMX20_04700 0.76 +2.6
59,335 - MPMX20_04700 0.79 -0.7
59,335 - MPMX20_04700 0.79 +0.1
59,352 + MPMX20_04700 0.80 -1.1
59,352 + MPMX20_04700 0.80 +1.8
59,352 + MPMX20_04700 0.80 +2.1
59,360 - MPMX20_04700 0.81 -0.1
59,360 - MPMX20_04700 0.81 +1.0
59,360 - MPMX20_04700 0.81 -0.5
59,383 - MPMX20_04700 0.83 +0.3
59,402 - MPMX20_04700 0.85 +3.0
59,489 - +1.3
59,517 - +3.1
59,517 - -0.3
59,521 + +1.3
59,565 + -0.4
59,586 - -0.2
59,639 + MPMX20_04701 0.15 -1.1
59,639 - MPMX20_04701 0.15 -2.4
59,659 + MPMX20_04701 0.18 -2.2
59,664 + MPMX20_04701 0.19 +1.6
59,667 - MPMX20_04701 0.19 +0.5
59,714 + MPMX20_04701 0.27 +1.0
59,727 - MPMX20_04701 0.29 -0.2
59,737 - MPMX20_04701 0.30 +0.8
59,755 + MPMX20_04701 0.33 +0.9
59,843 + MPMX20_04701 0.47 +1.7
59,889 + MPMX20_04701 0.54 -0.7
59,904 + MPMX20_04701 0.57 -1.2
59,918 + MPMX20_04701 0.59 -0.9
59,918 + MPMX20_04701 0.59 +0.6
59,920 + MPMX20_04701 0.59 +1.8
59,923 + MPMX20_04701 0.60 +1.3
59,927 + MPMX20_04701 0.60 -1.9
59,928 - MPMX20_04701 0.60 -0.3
59,935 + MPMX20_04701 0.61 -0.3
59,935 + MPMX20_04701 0.61 -1.9
59,935 + MPMX20_04701 0.61 -2.0
59,935 + MPMX20_04701 0.61 +0.2
59,943 - MPMX20_04701 0.63 -0.8
59,943 - MPMX20_04701 0.63 -0.9
59,943 - MPMX20_04701 0.63 -0.3
59,943 - MPMX20_04701 0.63 -0.7
59,943 - MPMX20_04701 0.63 +2.5
59,952 + MPMX20_04701 0.64 -0.7
59,967 - MPMX20_04701 0.67 +0.5
59,976 - MPMX20_04701 0.68 +3.0
59,977 + MPMX20_04701 0.68 -0.7
60,002 + MPMX20_04701 0.72 +1.7
60,010 - MPMX20_04701 0.73 +2.6
60,018 + MPMX20_04701 0.75 -0.1
60,052 - MPMX20_04701 0.80 -0.7
60,068 - MPMX20_04701 0.82 +0.2
60,068 - MPMX20_04701 0.82 -0.3
60,068 - MPMX20_04701 0.82 -0.5
60,073 - MPMX20_04701 0.83 -1.8
60,084 - MPMX20_04701 0.85 -2.3
60,084 - MPMX20_04701 0.85 -0.6
60,097 + MPMX20_04701 0.87 -2.1
60,097 + MPMX20_04701 0.87 -0.0
60,105 - MPMX20_04701 0.88 -0.1
60,134 + +1.1
60,148 + +1.2
60,165 - -1.3
60,190 - +0.1
60,209 + +0.1
60,249 + MPMX20_04702 0.16 -1.6
60,257 - MPMX20_04702 0.18 +0.1
60,257 - MPMX20_04702 0.18 +0.1
60,257 - MPMX20_04702 0.18 -0.5
60,257 - MPMX20_04702 0.18 +1.9
60,257 - MPMX20_04702 0.18 -0.2
60,257 - MPMX20_04702 0.18 +0.7
60,259 + MPMX20_04702 0.18 +3.2
60,303 + MPMX20_04702 0.29 -0.3
60,356 - MPMX20_04702 0.41 -0.7
60,361 - MPMX20_04702 0.42 -2.0
60,362 - MPMX20_04702 0.42 +0.8
60,378 + MPMX20_04702 0.46 +1.2
60,388 + MPMX20_04702 0.48 -0.6
60,391 - MPMX20_04702 0.49 +2.1
60,439 + MPMX20_04702 0.60 +2.6
60,446 - MPMX20_04702 0.61 +0.9
60,479 + MPMX20_04702 0.69 +0.1
60,509 - MPMX20_04702 0.76 +1.7
60,530 + MPMX20_04702 0.81 +1.1
60,530 + MPMX20_04702 0.81 +3.3
60,530 + MPMX20_04702 0.81 +0.5
60,538 - MPMX20_04702 0.83 -0.6
60,548 + MPMX20_04702 0.85 +0.8
60,549 + MPMX20_04702 0.85 -1.1
60,629 - -1.5
60,629 - +0.5
60,681 - +1.8
60,705 + -1.0
60,741 + -0.9
60,746 + -0.3
60,749 - +0.1
60,756 + +0.6
60,756 + +0.8
60,771 + -1.6
60,816 + -1.3
60,816 + +0.5
60,816 + +1.4
60,816 + +0.6
60,816 + +1.2
60,816 + -0.4
60,816 + -0.2
60,824 - -0.9
60,824 - -0.3
60,824 - -1.5
60,824 - -1.3
60,824 - -1.3
60,824 - +0.9
60,824 - -1.1
60,827 - +0.2
60,832 + -0.4
60,867 - -1.2
60,891 + MPMX20_04703 0.11 +0.9
60,891 + MPMX20_04703 0.11 -0.3
60,891 + MPMX20_04703 0.11 -0.4
60,899 - MPMX20_04703 0.11 +0.5
60,901 + MPMX20_04703 0.11 -0.7
60,901 + MPMX20_04703 0.11 +2.6
60,906 + MPMX20_04703 0.11 -0.9
60,906 + MPMX20_04703 0.11 -2.4
60,906 + MPMX20_04703 0.11 +0.5
60,906 + MPMX20_04703 0.11 +0.6
60,909 - MPMX20_04703 0.12 +0.5
60,909 - MPMX20_04703 0.12 -3.2
60,909 - MPMX20_04703 0.12 +0.7
60,909 - MPMX20_04703 0.12 +0.3
60,913 - MPMX20_04703 0.12 +2.6
60,913 - MPMX20_04703 0.12 +0.3
60,913 - MPMX20_04703 0.12 +1.1
60,924 - MPMX20_04703 0.12 +0.6
60,926 + MPMX20_04703 0.12 +1.7
60,936 + MPMX20_04703 0.13 -0.4
60,937 + MPMX20_04703 0.13 +0.7
60,955 - MPMX20_04703 0.13 -0.7
60,959 + MPMX20_04703 0.13 -2.1
60,959 + MPMX20_04703 0.13 -1.8
60,959 + MPMX20_04703 0.13 +1.6
60,959 + MPMX20_04703 0.13 +1.0
60,959 + MPMX20_04703 0.13 +0.8
60,959 + MPMX20_04703 0.13 +0.2
60,967 - MPMX20_04703 0.14 +0.1
60,967 - MPMX20_04703 0.14 -0.3
60,967 - MPMX20_04703 0.14 +0.6
61,031 - MPMX20_04703 0.16 -0.9
61,058 + MPMX20_04703 0.17 +0.7
61,116 + MPMX20_04703 0.20 -0.3
61,124 - MPMX20_04703 0.20 -0.8
61,144 - MPMX20_04703 0.21 -1.4
61,144 - MPMX20_04703 0.21 -0.5
61,146 + MPMX20_04703 0.21 +3.3
61,146 + MPMX20_04703 0.21 -1.7
61,154 - MPMX20_04703 0.21 -1.3
61,154 - MPMX20_04703 0.21 -0.2
61,154 - MPMX20_04703 0.21 +0.9
61,154 - MPMX20_04703 0.21 +0.3
61,221 + MPMX20_04703 0.24 -1.6
61,221 + MPMX20_04703 0.24 +0.6
61,221 + MPMX20_04703 0.24 +1.6
61,221 + MPMX20_04703 0.24 -1.3
61,221 + MPMX20_04703 0.24 +0.1
61,221 + MPMX20_04703 0.24 +2.8
61,226 + MPMX20_04703 0.24 +0.5
61,229 - MPMX20_04703 0.24 +0.9
61,229 - MPMX20_04703 0.24 +1.1
61,229 - MPMX20_04703 0.24 +0.9
61,229 - MPMX20_04703 0.24 -0.9
61,229 - MPMX20_04703 0.24 +0.8
61,229 - MPMX20_04703 0.24 +1.5
61,248 + MPMX20_04703 0.25 -0.5
61,256 - MPMX20_04703 0.25 -1.6
61,256 - MPMX20_04703 0.25 +0.9
61,325 + MPMX20_04703 0.28 +1.5
61,325 + MPMX20_04703 0.28 +0.0
61,325 - MPMX20_04703 0.28 -1.6
61,333 - MPMX20_04703 0.28 -1.7
61,334 + MPMX20_04703 0.28 -1.2
61,473 + MPMX20_04703 0.33 +1.1
61,479 - MPMX20_04703 0.34 +0.2
61,481 - MPMX20_04703 0.34 +0.3
61,481 - MPMX20_04703 0.34 -0.9
61,505 + MPMX20_04703 0.35 -1.5
61,505 + MPMX20_04703 0.35 +1.5
61,553 + MPMX20_04703 0.36 -2.2
61,555 + MPMX20_04703 0.36 +0.7
61,556 - MPMX20_04703 0.36 +0.3
61,570 - MPMX20_04703 0.37 +0.7

Or see this region's nucleotide sequence