Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03064

Experiment: 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03063 and MPMX20_03064 overlap by 4 nucleotidesMPMX20_03064 and MPMX20_03065 overlap by 4 nucleotidesMPMX20_03065 and MPMX20_03066 are separated by 135 nucleotides MPMX20_03063: MPMX20_03063 - Putative multidrug resistance protein MdtD, at 3,212,084 to 3,213,499 _03063 MPMX20_03064: MPMX20_03064 - Signal transduction histidine-protein kinase BaeS, at 3,213,496 to 3,214,899 _03064 MPMX20_03065: MPMX20_03065 - Transcriptional regulatory protein BaeR, at 3,214,896 to 3,215,618 _03065 MPMX20_03066: MPMX20_03066 - hypothetical protein, at 3,215,754 to 3,216,086 _03066 Position (kb) 3213 3214 3215Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 3212.496 kb on + strand, within MPMX20_03063at 3212.532 kb on + strand, within MPMX20_03063at 3212.540 kb on - strand, within MPMX20_03063at 3212.550 kb on - strand, within MPMX20_03063at 3212.590 kb on - strand, within MPMX20_03063at 3212.651 kb on + strand, within MPMX20_03063at 3212.659 kb on - strand, within MPMX20_03063at 3212.687 kb on - strand, within MPMX20_03063at 3212.716 kb on - strand, within MPMX20_03063at 3212.790 kb on + strand, within MPMX20_03063at 3212.790 kb on + strand, within MPMX20_03063at 3212.798 kb on - strand, within MPMX20_03063at 3212.823 kb on - strand, within MPMX20_03063at 3212.830 kb on - strand, within MPMX20_03063at 3212.876 kb on - strand, within MPMX20_03063at 3212.986 kb on + strand, within MPMX20_03063at 3213.095 kb on + strand, within MPMX20_03063at 3213.095 kb on + strand, within MPMX20_03063at 3213.095 kb on + strand, within MPMX20_03063at 3213.098 kb on - strand, within MPMX20_03063at 3213.103 kb on - strand, within MPMX20_03063at 3213.103 kb on - strand, within MPMX20_03063at 3213.103 kb on - strand, within MPMX20_03063at 3213.103 kb on - strand, within MPMX20_03063at 3213.103 kb on - strand, within MPMX20_03063at 3213.113 kb on - strand, within MPMX20_03063at 3213.120 kb on - strand, within MPMX20_03063at 3213.155 kb on + strand, within MPMX20_03063at 3213.166 kb on - strand, within MPMX20_03063at 3213.178 kb on + strand, within MPMX20_03063at 3213.178 kb on + strand, within MPMX20_03063at 3213.186 kb on - strand, within MPMX20_03063at 3213.186 kb on - strand, within MPMX20_03063at 3213.291 kb on + strand, within MPMX20_03063at 3213.291 kb on + strand, within MPMX20_03063at 3213.296 kb on + strand, within MPMX20_03063at 3213.296 kb on + strand, within MPMX20_03063at 3213.297 kb on + strand, within MPMX20_03063at 3213.299 kb on - strand, within MPMX20_03063at 3213.299 kb on - strand, within MPMX20_03063at 3213.299 kb on - strand, within MPMX20_03063at 3213.304 kb on - strand, within MPMX20_03063at 3213.305 kb on - strand, within MPMX20_03063at 3213.478 kb on + strandat 3213.576 kb on + strandat 3213.576 kb on + strandat 3213.576 kb on + strandat 3213.576 kb on + strandat 3213.576 kb on + strandat 3213.579 kb on - strandat 3213.579 kb on - strandat 3213.579 kb on - strandat 3213.584 kb on - strandat 3213.589 kb on - strandat 3213.596 kb on + strandat 3213.604 kb on - strandat 3213.642 kb on + strand, within MPMX20_03064at 3213.662 kb on - strand, within MPMX20_03064at 3213.685 kb on - strand, within MPMX20_03064at 3213.839 kb on - strand, within MPMX20_03064at 3213.853 kb on - strand, within MPMX20_03064at 3213.908 kb on - strand, within MPMX20_03064at 3214.010 kb on + strand, within MPMX20_03064at 3214.020 kb on - strand, within MPMX20_03064at 3214.071 kb on + strand, within MPMX20_03064at 3214.136 kb on + strand, within MPMX20_03064at 3214.172 kb on + strand, within MPMX20_03064at 3214.172 kb on + strand, within MPMX20_03064at 3214.180 kb on - strand, within MPMX20_03064at 3214.180 kb on - strand, within MPMX20_03064at 3214.185 kb on + strand, within MPMX20_03064at 3214.291 kb on + strand, within MPMX20_03064at 3214.291 kb on + strand, within MPMX20_03064at 3214.299 kb on - strand, within MPMX20_03064at 3214.311 kb on + strand, within MPMX20_03064at 3214.349 kb on - strand, within MPMX20_03064at 3214.359 kb on + strand, within MPMX20_03064at 3214.359 kb on + strand, within MPMX20_03064at 3214.376 kb on + strand, within MPMX20_03064at 3214.376 kb on + strand, within MPMX20_03064at 3214.384 kb on - strand, within MPMX20_03064at 3214.384 kb on - strand, within MPMX20_03064at 3214.418 kb on + strand, within MPMX20_03064at 3214.516 kb on + strand, within MPMX20_03064at 3214.551 kb on - strand, within MPMX20_03064at 3214.593 kb on + strand, within MPMX20_03064at 3214.593 kb on + strand, within MPMX20_03064at 3214.601 kb on - strand, within MPMX20_03064at 3214.601 kb on - strand, within MPMX20_03064at 3214.620 kb on + strand, within MPMX20_03064at 3214.625 kb on - strand, within MPMX20_03064at 3214.669 kb on - strand, within MPMX20_03064at 3214.671 kb on + strand, within MPMX20_03064at 3214.691 kb on + strand, within MPMX20_03064at 3214.728 kb on + strand, within MPMX20_03064at 3214.827 kb on + strandat 3214.850 kb on + strandat 3214.892 kb on + strandat 3215.002 kb on + strand, within MPMX20_03065at 3215.010 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.109 kb on - strand, within MPMX20_03065at 3215.129 kb on + strand, within MPMX20_03065at 3215.208 kb on + strand, within MPMX20_03065at 3215.214 kb on - strand, within MPMX20_03065at 3215.228 kb on + strand, within MPMX20_03065at 3215.275 kb on + strand, within MPMX20_03065at 3215.287 kb on + strand, within MPMX20_03065at 3215.429 kb on + strand, within MPMX20_03065at 3215.440 kb on - strand, within MPMX20_03065at 3215.448 kb on + strand, within MPMX20_03065at 3215.456 kb on - strand, within MPMX20_03065at 3215.456 kb on - strand, within MPMX20_03065at 3215.462 kb on + strand, within MPMX20_03065at 3215.482 kb on + strand, within MPMX20_03065at 3215.537 kb on + strand, within MPMX20_03065at 3215.568 kb on + strandat 3215.568 kb on + strandat 3215.576 kb on - strandat 3215.576 kb on - strandat 3215.603 kb on + strandat 3215.611 kb on - strandat 3215.627 kb on - strandat 3215.677 kb on + strandat 3215.795 kb on + strand, within MPMX20_03066at 3215.795 kb on + strand, within MPMX20_03066at 3215.803 kb on - strand, within MPMX20_03066at 3215.808 kb on - strand, within MPMX20_03066at 3215.822 kb on - strand, within MPMX20_03066at 3215.832 kb on + strand, within MPMX20_03066at 3215.832 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.846 kb on + strand, within MPMX20_03066at 3215.854 kb on - strand, within MPMX20_03066at 3215.854 kb on - strand, within MPMX20_03066at 3215.854 kb on - strand, within MPMX20_03066

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,212,496 + MPMX20_03063 0.29 -0.5
3,212,532 + MPMX20_03063 0.32 +1.3
3,212,540 - MPMX20_03063 0.32 -3.2
3,212,550 - MPMX20_03063 0.33 -1.0
3,212,590 - MPMX20_03063 0.36 -0.7
3,212,651 + MPMX20_03063 0.40 -0.4
3,212,659 - MPMX20_03063 0.41 +0.3
3,212,687 - MPMX20_03063 0.43 -0.3
3,212,716 - MPMX20_03063 0.45 +0.5
3,212,790 + MPMX20_03063 0.50 +1.2
3,212,790 + MPMX20_03063 0.50 +0.0
3,212,798 - MPMX20_03063 0.50 +1.4
3,212,823 - MPMX20_03063 0.52 +2.3
3,212,830 - MPMX20_03063 0.53 -2.5
3,212,876 - MPMX20_03063 0.56 -0.2
3,212,986 + MPMX20_03063 0.64 -1.7
3,213,095 + MPMX20_03063 0.71 +0.7
3,213,095 + MPMX20_03063 0.71 +0.0
3,213,095 + MPMX20_03063 0.71 -0.1
3,213,098 - MPMX20_03063 0.72 +1.6
3,213,103 - MPMX20_03063 0.72 -0.5
3,213,103 - MPMX20_03063 0.72 -0.7
3,213,103 - MPMX20_03063 0.72 +0.7
3,213,103 - MPMX20_03063 0.72 +1.0
3,213,103 - MPMX20_03063 0.72 -0.4
3,213,113 - MPMX20_03063 0.73 +0.0
3,213,120 - MPMX20_03063 0.73 -2.2
3,213,155 + MPMX20_03063 0.76 -3.7
3,213,166 - MPMX20_03063 0.76 -1.4
3,213,178 + MPMX20_03063 0.77 -1.4
3,213,178 + MPMX20_03063 0.77 -2.0
3,213,186 - MPMX20_03063 0.78 -2.0
3,213,186 - MPMX20_03063 0.78 +0.0
3,213,291 + MPMX20_03063 0.85 +0.7
3,213,291 + MPMX20_03063 0.85 +0.7
3,213,296 + MPMX20_03063 0.86 -0.7
3,213,296 + MPMX20_03063 0.86 +0.4
3,213,297 + MPMX20_03063 0.86 -0.3
3,213,299 - MPMX20_03063 0.86 -1.3
3,213,299 - MPMX20_03063 0.86 -0.1
3,213,299 - MPMX20_03063 0.86 +0.3
3,213,304 - MPMX20_03063 0.86 -1.8
3,213,305 - MPMX20_03063 0.86 +0.1
3,213,478 + +0.7
3,213,576 + -2.4
3,213,576 + +0.0
3,213,576 + -0.4
3,213,576 + +1.1
3,213,576 + -1.2
3,213,579 - -1.0
3,213,579 - -1.0
3,213,579 - -1.4
3,213,584 - +0.4
3,213,589 - +0.3
3,213,596 + +0.6
3,213,604 - +1.0
3,213,642 + MPMX20_03064 0.10 +0.1
3,213,662 - MPMX20_03064 0.12 +0.4
3,213,685 - MPMX20_03064 0.13 +0.4
3,213,839 - MPMX20_03064 0.24 -1.5
3,213,853 - MPMX20_03064 0.25 -1.7
3,213,908 - MPMX20_03064 0.29 +0.3
3,214,010 + MPMX20_03064 0.37 +0.9
3,214,020 - MPMX20_03064 0.37 -3.7
3,214,071 + MPMX20_03064 0.41 -3.9
3,214,136 + MPMX20_03064 0.46 -1.6
3,214,172 + MPMX20_03064 0.48 -0.5
3,214,172 + MPMX20_03064 0.48 +2.1
3,214,180 - MPMX20_03064 0.49 -2.6
3,214,180 - MPMX20_03064 0.49 -1.1
3,214,185 + MPMX20_03064 0.49 +0.8
3,214,291 + MPMX20_03064 0.57 -1.8
3,214,291 + MPMX20_03064 0.57 +1.3
3,214,299 - MPMX20_03064 0.57 -1.5
3,214,311 + MPMX20_03064 0.58 -1.3
3,214,349 - MPMX20_03064 0.61 +0.8
3,214,359 + MPMX20_03064 0.61 -1.4
3,214,359 + MPMX20_03064 0.61 +1.1
3,214,376 + MPMX20_03064 0.63 -2.9
3,214,376 + MPMX20_03064 0.63 -4.0
3,214,384 - MPMX20_03064 0.63 -0.1
3,214,384 - MPMX20_03064 0.63 +1.4
3,214,418 + MPMX20_03064 0.66 -0.2
3,214,516 + MPMX20_03064 0.73 -1.5
3,214,551 - MPMX20_03064 0.75 -2.0
3,214,593 + MPMX20_03064 0.78 -0.4
3,214,593 + MPMX20_03064 0.78 +0.5
3,214,601 - MPMX20_03064 0.79 +0.5
3,214,601 - MPMX20_03064 0.79 +0.7
3,214,620 + MPMX20_03064 0.80 +1.0
3,214,625 - MPMX20_03064 0.80 -1.1
3,214,669 - MPMX20_03064 0.84 +0.0
3,214,671 + MPMX20_03064 0.84 -0.7
3,214,691 + MPMX20_03064 0.85 -2.3
3,214,728 + MPMX20_03064 0.88 -0.6
3,214,827 + -0.5
3,214,850 + -0.3
3,214,892 + +0.4
3,215,002 + MPMX20_03065 0.15 -0.4
3,215,010 - MPMX20_03065 0.16 +0.4
3,215,109 - MPMX20_03065 0.29 +0.0
3,215,109 - MPMX20_03065 0.29 -0.8
3,215,109 - MPMX20_03065 0.29 -0.4
3,215,109 - MPMX20_03065 0.29 -0.0
3,215,109 - MPMX20_03065 0.29 -1.3
3,215,129 + MPMX20_03065 0.32 +1.6
3,215,208 + MPMX20_03065 0.43 -4.1
3,215,214 - MPMX20_03065 0.44 +2.6
3,215,228 + MPMX20_03065 0.46 -0.7
3,215,275 + MPMX20_03065 0.52 +2.1
3,215,287 + MPMX20_03065 0.54 -0.2
3,215,429 + MPMX20_03065 0.74 -0.7
3,215,440 - MPMX20_03065 0.75 +4.8
3,215,448 + MPMX20_03065 0.76 -0.5
3,215,456 - MPMX20_03065 0.77 -0.8
3,215,456 - MPMX20_03065 0.77 -0.8
3,215,462 + MPMX20_03065 0.78 +1.0
3,215,482 + MPMX20_03065 0.81 +2.8
3,215,537 + MPMX20_03065 0.89 -3.0
3,215,568 + -0.3
3,215,568 + -1.4
3,215,576 - +0.8
3,215,576 - -0.4
3,215,603 + -0.6
3,215,611 - +0.5
3,215,627 - +0.1
3,215,677 + -0.4
3,215,795 + MPMX20_03066 0.12 -1.4
3,215,795 + MPMX20_03066 0.12 -0.9
3,215,803 - MPMX20_03066 0.15 +0.1
3,215,808 - MPMX20_03066 0.16 -0.7
3,215,822 - MPMX20_03066 0.20 -0.2
3,215,832 + MPMX20_03066 0.23 +0.8
3,215,832 + MPMX20_03066 0.23 +0.0
3,215,846 + MPMX20_03066 0.28 -1.9
3,215,846 + MPMX20_03066 0.28 +1.6
3,215,846 + MPMX20_03066 0.28 +0.8
3,215,846 + MPMX20_03066 0.28 +0.7
3,215,846 + MPMX20_03066 0.28 +0.9
3,215,854 - MPMX20_03066 0.30 -2.2
3,215,854 - MPMX20_03066 0.30 +0.2
3,215,854 - MPMX20_03066 0.30 +0.8

Or see this region's nucleotide sequence