Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01418

Experiment: 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01417 and MPMX20_01418 overlap by 4 nucleotidesMPMX20_01418 and MPMX20_01419 are separated by 133 nucleotidesMPMX20_01419 and MPMX20_01420 overlap by 39 nucleotides MPMX20_01417: MPMX20_01417 - Cardiolipin synthase B, at 1,479,555 to 1,480,796 _01417 MPMX20_01418: MPMX20_01418 - hypothetical protein, at 1,480,793 to 1,481,554 _01418 MPMX20_01419: MPMX20_01419 - Inner membrane protein YbhQ, at 1,481,688 to 1,482,098 _01419 MPMX20_01420: MPMX20_01420 - putative multidrug ABC transporter permease YbhR, at 1,482,060 to 1,483,166 _01420 Position (kb) 1480 1481 1482Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 1479.887 kb on + strand, within MPMX20_01417at 1479.919 kb on - strand, within MPMX20_01417at 1479.924 kb on - strand, within MPMX20_01417at 1479.924 kb on - strand, within MPMX20_01417at 1479.964 kb on + strand, within MPMX20_01417at 1480.024 kb on - strand, within MPMX20_01417at 1480.078 kb on + strand, within MPMX20_01417at 1480.138 kb on + strand, within MPMX20_01417at 1480.166 kb on + strand, within MPMX20_01417at 1480.190 kb on - strand, within MPMX20_01417at 1480.197 kb on - strand, within MPMX20_01417at 1480.323 kb on + strand, within MPMX20_01417at 1480.331 kb on - strand, within MPMX20_01417at 1480.331 kb on - strand, within MPMX20_01417at 1480.389 kb on + strand, within MPMX20_01417at 1480.405 kb on - strand, within MPMX20_01417at 1480.468 kb on - strand, within MPMX20_01417at 1480.502 kb on + strand, within MPMX20_01417at 1480.511 kb on - strand, within MPMX20_01417at 1480.619 kb on + strand, within MPMX20_01417at 1480.631 kb on + strand, within MPMX20_01417at 1480.639 kb on + strand, within MPMX20_01417at 1480.639 kb on - strand, within MPMX20_01417at 1480.641 kb on + strand, within MPMX20_01417at 1480.747 kb on + strandat 1480.782 kb on - strandat 1480.799 kb on - strandat 1480.812 kb on - strandat 1480.991 kb on - strand, within MPMX20_01418at 1481.001 kb on + strand, within MPMX20_01418at 1481.010 kb on - strand, within MPMX20_01418at 1481.055 kb on + strand, within MPMX20_01418at 1481.055 kb on + strand, within MPMX20_01418at 1481.055 kb on + strand, within MPMX20_01418at 1481.075 kb on - strand, within MPMX20_01418at 1481.105 kb on + strand, within MPMX20_01418at 1481.118 kb on - strand, within MPMX20_01418at 1481.122 kb on + strand, within MPMX20_01418at 1481.128 kb on + strand, within MPMX20_01418at 1481.128 kb on + strand, within MPMX20_01418at 1481.281 kb on + strand, within MPMX20_01418at 1481.281 kb on + strand, within MPMX20_01418at 1481.281 kb on + strand, within MPMX20_01418at 1481.291 kb on - strand, within MPMX20_01418at 1481.448 kb on + strand, within MPMX20_01418at 1481.503 kb on - strandat 1481.583 kb on - strandat 1481.600 kb on - strandat 1481.685 kb on + strandat 1481.693 kb on - strandat 1481.721 kb on + strandat 1481.778 kb on + strand, within MPMX20_01419at 1481.809 kb on + strand, within MPMX20_01419at 1481.809 kb on + strand, within MPMX20_01419at 1481.809 kb on + strand, within MPMX20_01419at 1481.809 kb on + strand, within MPMX20_01419at 1481.809 kb on + strand, within MPMX20_01419at 1481.809 kb on + strand, within MPMX20_01419at 1481.809 kb on + strand, within MPMX20_01419at 1481.809 kb on + strand, within MPMX20_01419at 1481.809 kb on + strand, within MPMX20_01419at 1481.817 kb on - strand, within MPMX20_01419at 1481.817 kb on - strand, within MPMX20_01419at 1481.817 kb on - strand, within MPMX20_01419at 1481.817 kb on - strand, within MPMX20_01419at 1481.891 kb on + strand, within MPMX20_01419at 1481.892 kb on - strand, within MPMX20_01419at 1481.892 kb on - strand, within MPMX20_01419at 1481.994 kb on + strand, within MPMX20_01419at 1482.035 kb on - strand, within MPMX20_01419at 1482.044 kb on + strand, within MPMX20_01419at 1482.117 kb on + strandat 1482.117 kb on + strandat 1482.219 kb on + strand, within MPMX20_01420at 1482.235 kb on - strand, within MPMX20_01420at 1482.254 kb on - strand, within MPMX20_01420at 1482.321 kb on + strand, within MPMX20_01420at 1482.353 kb on + strand, within MPMX20_01420at 1482.361 kb on - strand, within MPMX20_01420at 1482.361 kb on - strand, within MPMX20_01420at 1482.361 kb on - strand, within MPMX20_01420

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,479,887 + MPMX20_01417 0.27 -0.1
1,479,919 - MPMX20_01417 0.29 +1.4
1,479,924 - MPMX20_01417 0.30 +0.0
1,479,924 - MPMX20_01417 0.30 +0.4
1,479,964 + MPMX20_01417 0.33 +0.7
1,480,024 - MPMX20_01417 0.38 -1.5
1,480,078 + MPMX20_01417 0.42 +0.9
1,480,138 + MPMX20_01417 0.47 +1.8
1,480,166 + MPMX20_01417 0.49 -3.1
1,480,190 - MPMX20_01417 0.51 +2.4
1,480,197 - MPMX20_01417 0.52 -1.1
1,480,323 + MPMX20_01417 0.62 -1.8
1,480,331 - MPMX20_01417 0.62 -0.3
1,480,331 - MPMX20_01417 0.62 +1.6
1,480,389 + MPMX20_01417 0.67 -3.5
1,480,405 - MPMX20_01417 0.68 +2.9
1,480,468 - MPMX20_01417 0.74 +0.6
1,480,502 + MPMX20_01417 0.76 -0.5
1,480,511 - MPMX20_01417 0.77 -0.2
1,480,619 + MPMX20_01417 0.86 -1.5
1,480,631 + MPMX20_01417 0.87 -0.4
1,480,639 + MPMX20_01417 0.87 +1.0
1,480,639 - MPMX20_01417 0.87 -0.3
1,480,641 + MPMX20_01417 0.87 +0.8
1,480,747 + -0.3
1,480,782 - -2.4
1,480,799 - -1.2
1,480,812 - -1.7
1,480,991 - MPMX20_01418 0.26 -0.1
1,481,001 + MPMX20_01418 0.27 -2.2
1,481,010 - MPMX20_01418 0.28 -1.3
1,481,055 + MPMX20_01418 0.34 -2.1
1,481,055 + MPMX20_01418 0.34 +0.6
1,481,055 + MPMX20_01418 0.34 -2.4
1,481,075 - MPMX20_01418 0.37 -2.1
1,481,105 + MPMX20_01418 0.41 -1.4
1,481,118 - MPMX20_01418 0.43 -0.1
1,481,122 + MPMX20_01418 0.43 +3.2
1,481,128 + MPMX20_01418 0.44 +0.1
1,481,128 + MPMX20_01418 0.44 -2.9
1,481,281 + MPMX20_01418 0.64 +0.0
1,481,281 + MPMX20_01418 0.64 -0.6
1,481,281 + MPMX20_01418 0.64 +0.6
1,481,291 - MPMX20_01418 0.65 +0.0
1,481,448 + MPMX20_01418 0.86 -0.3
1,481,503 - -0.5
1,481,583 - +0.6
1,481,600 - -1.4
1,481,685 + +1.6
1,481,693 - -2.3
1,481,721 + -1.1
1,481,778 + MPMX20_01419 0.22 -2.5
1,481,809 + MPMX20_01419 0.29 -4.0
1,481,809 + MPMX20_01419 0.29 +0.6
1,481,809 + MPMX20_01419 0.29 +0.6
1,481,809 + MPMX20_01419 0.29 +1.4
1,481,809 + MPMX20_01419 0.29 -0.7
1,481,809 + MPMX20_01419 0.29 -0.7
1,481,809 + MPMX20_01419 0.29 +0.1
1,481,809 + MPMX20_01419 0.29 -3.0
1,481,809 + MPMX20_01419 0.29 +0.3
1,481,817 - MPMX20_01419 0.31 +2.1
1,481,817 - MPMX20_01419 0.31 -0.7
1,481,817 - MPMX20_01419 0.31 +0.3
1,481,817 - MPMX20_01419 0.31 -1.2
1,481,891 + MPMX20_01419 0.49 +0.7
1,481,892 - MPMX20_01419 0.50 -0.2
1,481,892 - MPMX20_01419 0.50 -1.5
1,481,994 + MPMX20_01419 0.74 +4.4
1,482,035 - MPMX20_01419 0.84 +1.3
1,482,044 + MPMX20_01419 0.87 -0.4
1,482,117 + +0.2
1,482,117 + -1.5
1,482,219 + MPMX20_01420 0.14 -0.7
1,482,235 - MPMX20_01420 0.16 -0.1
1,482,254 - MPMX20_01420 0.18 +0.7
1,482,321 + MPMX20_01420 0.24 -1.0
1,482,353 + MPMX20_01420 0.26 +0.0
1,482,361 - MPMX20_01420 0.27 +1.0
1,482,361 - MPMX20_01420 0.27 +0.5
1,482,361 - MPMX20_01420 0.27 +0.6

Or see this region's nucleotide sequence