Experiment: 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01417 and MPMX20_01418 overlap by 4 nucleotides MPMX20_01418 and MPMX20_01419 are separated by 133 nucleotides MPMX20_01419 and MPMX20_01420 overlap by 39 nucleotides
MPMX20_01417: MPMX20_01417 - Cardiolipin synthase B, at 1,479,555 to 1,480,796
_01417
MPMX20_01418: MPMX20_01418 - hypothetical protein, at 1,480,793 to 1,481,554
_01418
MPMX20_01419: MPMX20_01419 - Inner membrane protein YbhQ, at 1,481,688 to 1,482,098
_01419
MPMX20_01420: MPMX20_01420 - putative multidrug ABC transporter permease YbhR, at 1,482,060 to 1,483,166
_01420
Position (kb)
1480
1481
1482 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 1479.887 kb on + strand, within MPMX20_01417 at 1479.919 kb on - strand, within MPMX20_01417 at 1479.924 kb on - strand, within MPMX20_01417 at 1479.924 kb on - strand, within MPMX20_01417 at 1479.964 kb on + strand, within MPMX20_01417 at 1480.024 kb on - strand, within MPMX20_01417 at 1480.078 kb on + strand, within MPMX20_01417 at 1480.138 kb on + strand, within MPMX20_01417 at 1480.166 kb on + strand, within MPMX20_01417 at 1480.190 kb on - strand, within MPMX20_01417 at 1480.197 kb on - strand, within MPMX20_01417 at 1480.323 kb on + strand, within MPMX20_01417 at 1480.331 kb on - strand, within MPMX20_01417 at 1480.331 kb on - strand, within MPMX20_01417 at 1480.389 kb on + strand, within MPMX20_01417 at 1480.405 kb on - strand, within MPMX20_01417 at 1480.468 kb on - strand, within MPMX20_01417 at 1480.502 kb on + strand, within MPMX20_01417 at 1480.511 kb on - strand, within MPMX20_01417 at 1480.619 kb on + strand, within MPMX20_01417 at 1480.631 kb on + strand, within MPMX20_01417 at 1480.639 kb on + strand, within MPMX20_01417 at 1480.639 kb on - strand, within MPMX20_01417 at 1480.641 kb on + strand, within MPMX20_01417 at 1480.747 kb on + strand at 1480.782 kb on - strand at 1480.799 kb on - strand at 1480.812 kb on - strand at 1480.991 kb on - strand, within MPMX20_01418 at 1481.001 kb on + strand, within MPMX20_01418 at 1481.010 kb on - strand, within MPMX20_01418 at 1481.055 kb on + strand, within MPMX20_01418 at 1481.055 kb on + strand, within MPMX20_01418 at 1481.055 kb on + strand, within MPMX20_01418 at 1481.075 kb on - strand, within MPMX20_01418 at 1481.105 kb on + strand, within MPMX20_01418 at 1481.118 kb on - strand, within MPMX20_01418 at 1481.122 kb on + strand, within MPMX20_01418 at 1481.128 kb on + strand, within MPMX20_01418 at 1481.128 kb on + strand, within MPMX20_01418 at 1481.281 kb on + strand, within MPMX20_01418 at 1481.281 kb on + strand, within MPMX20_01418 at 1481.281 kb on + strand, within MPMX20_01418 at 1481.291 kb on - strand, within MPMX20_01418 at 1481.448 kb on + strand, within MPMX20_01418 at 1481.503 kb on - strand at 1481.583 kb on - strand at 1481.600 kb on - strand at 1481.685 kb on + strand at 1481.693 kb on - strand at 1481.721 kb on + strand at 1481.778 kb on + strand, within MPMX20_01419 at 1481.809 kb on + strand, within MPMX20_01419 at 1481.809 kb on + strand, within MPMX20_01419 at 1481.809 kb on + strand, within MPMX20_01419 at 1481.809 kb on + strand, within MPMX20_01419 at 1481.809 kb on + strand, within MPMX20_01419 at 1481.809 kb on + strand, within MPMX20_01419 at 1481.809 kb on + strand, within MPMX20_01419 at 1481.809 kb on + strand, within MPMX20_01419 at 1481.809 kb on + strand, within MPMX20_01419 at 1481.817 kb on - strand, within MPMX20_01419 at 1481.817 kb on - strand, within MPMX20_01419 at 1481.817 kb on - strand, within MPMX20_01419 at 1481.817 kb on - strand, within MPMX20_01419 at 1481.891 kb on + strand, within MPMX20_01419 at 1481.892 kb on - strand, within MPMX20_01419 at 1481.892 kb on - strand, within MPMX20_01419 at 1481.994 kb on + strand, within MPMX20_01419 at 1482.035 kb on - strand, within MPMX20_01419 at 1482.044 kb on + strand, within MPMX20_01419 at 1482.117 kb on + strand at 1482.117 kb on + strand at 1482.219 kb on + strand, within MPMX20_01420 at 1482.235 kb on - strand, within MPMX20_01420 at 1482.254 kb on - strand, within MPMX20_01420 at 1482.321 kb on + strand, within MPMX20_01420 at 1482.353 kb on + strand, within MPMX20_01420 at 1482.361 kb on - strand, within MPMX20_01420 at 1482.361 kb on - strand, within MPMX20_01420 at 1482.361 kb on - strand, within MPMX20_01420
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,479,887 + MPMX20_01417 0.27 -0.1 1,479,919 - MPMX20_01417 0.29 +1.4 1,479,924 - MPMX20_01417 0.30 +0.0 1,479,924 - MPMX20_01417 0.30 +0.4 1,479,964 + MPMX20_01417 0.33 +0.7 1,480,024 - MPMX20_01417 0.38 -1.5 1,480,078 + MPMX20_01417 0.42 +0.9 1,480,138 + MPMX20_01417 0.47 +1.8 1,480,166 + MPMX20_01417 0.49 -3.1 1,480,190 - MPMX20_01417 0.51 +2.4 1,480,197 - MPMX20_01417 0.52 -1.1 1,480,323 + MPMX20_01417 0.62 -1.8 1,480,331 - MPMX20_01417 0.62 -0.3 1,480,331 - MPMX20_01417 0.62 +1.6 1,480,389 + MPMX20_01417 0.67 -3.5 1,480,405 - MPMX20_01417 0.68 +2.9 1,480,468 - MPMX20_01417 0.74 +0.6 1,480,502 + MPMX20_01417 0.76 -0.5 1,480,511 - MPMX20_01417 0.77 -0.2 1,480,619 + MPMX20_01417 0.86 -1.5 1,480,631 + MPMX20_01417 0.87 -0.4 1,480,639 + MPMX20_01417 0.87 +1.0 1,480,639 - MPMX20_01417 0.87 -0.3 1,480,641 + MPMX20_01417 0.87 +0.8 1,480,747 + -0.3 1,480,782 - -2.4 1,480,799 - -1.2 1,480,812 - -1.7 1,480,991 - MPMX20_01418 0.26 -0.1 1,481,001 + MPMX20_01418 0.27 -2.2 1,481,010 - MPMX20_01418 0.28 -1.3 1,481,055 + MPMX20_01418 0.34 -2.1 1,481,055 + MPMX20_01418 0.34 +0.6 1,481,055 + MPMX20_01418 0.34 -2.4 1,481,075 - MPMX20_01418 0.37 -2.1 1,481,105 + MPMX20_01418 0.41 -1.4 1,481,118 - MPMX20_01418 0.43 -0.1 1,481,122 + MPMX20_01418 0.43 +3.2 1,481,128 + MPMX20_01418 0.44 +0.1 1,481,128 + MPMX20_01418 0.44 -2.9 1,481,281 + MPMX20_01418 0.64 +0.0 1,481,281 + MPMX20_01418 0.64 -0.6 1,481,281 + MPMX20_01418 0.64 +0.6 1,481,291 - MPMX20_01418 0.65 +0.0 1,481,448 + MPMX20_01418 0.86 -0.3 1,481,503 - -0.5 1,481,583 - +0.6 1,481,600 - -1.4 1,481,685 + +1.6 1,481,693 - -2.3 1,481,721 + -1.1 1,481,778 + MPMX20_01419 0.22 -2.5 1,481,809 + MPMX20_01419 0.29 -4.0 1,481,809 + MPMX20_01419 0.29 +0.6 1,481,809 + MPMX20_01419 0.29 +0.6 1,481,809 + MPMX20_01419 0.29 +1.4 1,481,809 + MPMX20_01419 0.29 -0.7 1,481,809 + MPMX20_01419 0.29 -0.7 1,481,809 + MPMX20_01419 0.29 +0.1 1,481,809 + MPMX20_01419 0.29 -3.0 1,481,809 + MPMX20_01419 0.29 +0.3 1,481,817 - MPMX20_01419 0.31 +2.1 1,481,817 - MPMX20_01419 0.31 -0.7 1,481,817 - MPMX20_01419 0.31 +0.3 1,481,817 - MPMX20_01419 0.31 -1.2 1,481,891 + MPMX20_01419 0.49 +0.7 1,481,892 - MPMX20_01419 0.50 -0.2 1,481,892 - MPMX20_01419 0.50 -1.5 1,481,994 + MPMX20_01419 0.74 +4.4 1,482,035 - MPMX20_01419 0.84 +1.3 1,482,044 + MPMX20_01419 0.87 -0.4 1,482,117 + +0.2 1,482,117 + -1.5 1,482,219 + MPMX20_01420 0.14 -0.7 1,482,235 - MPMX20_01420 0.16 -0.1 1,482,254 - MPMX20_01420 0.18 +0.7 1,482,321 + MPMX20_01420 0.24 -1.0 1,482,353 + MPMX20_01420 0.26 +0.0 1,482,361 - MPMX20_01420 0.27 +1.0 1,482,361 - MPMX20_01420 0.27 +0.5 1,482,361 - MPMX20_01420 0.27 +0.6
Or see this region's nucleotide sequence