Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03130

Experiment: TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03129 and MPMX20_03130 are separated by 64 nucleotidesMPMX20_03130 and MPMX20_03131 are separated by 47 nucleotides MPMX20_03129: MPMX20_03129 - hypothetical protein, at 3,288,035 to 3,289,081 _03129 MPMX20_03130: MPMX20_03130 - Endonuclease 4, at 3,289,146 to 3,290,003 _03130 MPMX20_03131: MPMX20_03131 - PTS system fructose-specific EIIB'BC component, at 3,290,051 to 3,291,733 _03131 Position (kb) 3289 3290 3291Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 3288.166 kb on - strand, within MPMX20_03129at 3288.168 kb on + strand, within MPMX20_03129at 3288.175 kb on - strand, within MPMX20_03129at 3288.282 kb on + strand, within MPMX20_03129at 3288.290 kb on - strand, within MPMX20_03129at 3288.302 kb on + strand, within MPMX20_03129at 3288.302 kb on + strand, within MPMX20_03129at 3288.302 kb on + strand, within MPMX20_03129at 3288.310 kb on - strand, within MPMX20_03129at 3288.383 kb on - strand, within MPMX20_03129at 3288.407 kb on + strand, within MPMX20_03129at 3288.478 kb on + strand, within MPMX20_03129at 3288.504 kb on - strand, within MPMX20_03129at 3288.578 kb on + strand, within MPMX20_03129at 3288.603 kb on + strand, within MPMX20_03129at 3288.607 kb on - strand, within MPMX20_03129at 3288.611 kb on - strand, within MPMX20_03129at 3288.611 kb on - strand, within MPMX20_03129at 3288.669 kb on - strand, within MPMX20_03129at 3288.681 kb on + strand, within MPMX20_03129at 3288.737 kb on + strand, within MPMX20_03129at 3288.740 kb on - strand, within MPMX20_03129at 3288.742 kb on + strand, within MPMX20_03129at 3288.829 kb on - strand, within MPMX20_03129at 3288.865 kb on - strand, within MPMX20_03129at 3288.865 kb on - strand, within MPMX20_03129at 3288.867 kb on - strand, within MPMX20_03129at 3288.888 kb on - strand, within MPMX20_03129at 3288.964 kb on + strand, within MPMX20_03129at 3288.972 kb on - strand, within MPMX20_03129at 3289.016 kb on + strandat 3289.024 kb on - strandat 3289.061 kb on + strandat 3289.061 kb on + strandat 3289.061 kb on + strandat 3289.061 kb on + strandat 3289.066 kb on - strandat 3289.069 kb on - strandat 3289.161 kb on - strandat 3289.164 kb on + strandat 3289.174 kb on - strandat 3289.174 kb on - strandat 3289.174 kb on - strandat 3289.174 kb on - strandat 3289.174 kb on - strandat 3289.269 kb on + strand, within MPMX20_03130at 3289.277 kb on - strand, within MPMX20_03130at 3289.277 kb on - strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.279 kb on + strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.287 kb on - strand, within MPMX20_03130at 3289.547 kb on + strand, within MPMX20_03130at 3289.547 kb on + strand, within MPMX20_03130at 3289.595 kb on + strand, within MPMX20_03130at 3289.687 kb on + strand, within MPMX20_03130at 3289.720 kb on + strand, within MPMX20_03130at 3289.728 kb on - strand, within MPMX20_03130at 3289.948 kb on + strandat 3289.951 kb on - strandat 3289.951 kb on - strandat 3290.095 kb on - strandat 3290.097 kb on + strandat 3290.097 kb on + strandat 3290.097 kb on + strandat 3290.097 kb on + strandat 3290.103 kb on - strandat 3290.109 kb on + strandat 3290.110 kb on - strandat 3290.152 kb on + strandat 3290.246 kb on - strand, within MPMX20_03131at 3290.255 kb on + strand, within MPMX20_03131at 3290.263 kb on - strand, within MPMX20_03131at 3290.265 kb on + strand, within MPMX20_03131at 3290.294 kb on - strand, within MPMX20_03131at 3290.338 kb on + strand, within MPMX20_03131at 3290.346 kb on - strand, within MPMX20_03131at 3290.465 kb on + strand, within MPMX20_03131at 3290.465 kb on + strand, within MPMX20_03131at 3290.472 kb on + strand, within MPMX20_03131at 3290.473 kb on - strand, within MPMX20_03131at 3290.490 kb on - strand, within MPMX20_03131at 3290.513 kb on - strand, within MPMX20_03131at 3290.556 kb on + strand, within MPMX20_03131at 3290.556 kb on + strand, within MPMX20_03131at 3290.559 kb on - strand, within MPMX20_03131at 3290.603 kb on + strand, within MPMX20_03131at 3290.611 kb on - strand, within MPMX20_03131at 3290.611 kb on - strand, within MPMX20_03131at 3290.620 kb on - strand, within MPMX20_03131at 3290.662 kb on - strand, within MPMX20_03131at 3290.710 kb on + strand, within MPMX20_03131at 3290.710 kb on + strand, within MPMX20_03131at 3290.712 kb on + strand, within MPMX20_03131at 3290.712 kb on + strand, within MPMX20_03131at 3290.712 kb on + strand, within MPMX20_03131at 3290.718 kb on - strand, within MPMX20_03131at 3290.720 kb on - strand, within MPMX20_03131at 3290.720 kb on - strand, within MPMX20_03131at 3290.905 kb on + strand, within MPMX20_03131at 3290.997 kb on + strand, within MPMX20_03131

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,288,166 - MPMX20_03129 0.13 +1.2
3,288,168 + MPMX20_03129 0.13 -0.7
3,288,175 - MPMX20_03129 0.13 +0.1
3,288,282 + MPMX20_03129 0.24 +5.0
3,288,290 - MPMX20_03129 0.24 -0.0
3,288,302 + MPMX20_03129 0.26 -0.4
3,288,302 + MPMX20_03129 0.26 -0.7
3,288,302 + MPMX20_03129 0.26 -0.1
3,288,310 - MPMX20_03129 0.26 -0.8
3,288,383 - MPMX20_03129 0.33 -1.4
3,288,407 + MPMX20_03129 0.36 +1.2
3,288,478 + MPMX20_03129 0.42 -1.7
3,288,504 - MPMX20_03129 0.45 +0.2
3,288,578 + MPMX20_03129 0.52 +2.0
3,288,603 + MPMX20_03129 0.54 +0.0
3,288,607 - MPMX20_03129 0.55 -0.0
3,288,611 - MPMX20_03129 0.55 -0.4
3,288,611 - MPMX20_03129 0.55 +0.2
3,288,669 - MPMX20_03129 0.61 -0.8
3,288,681 + MPMX20_03129 0.62 -0.3
3,288,737 + MPMX20_03129 0.67 -0.5
3,288,740 - MPMX20_03129 0.67 -1.0
3,288,742 + MPMX20_03129 0.68 +0.0
3,288,829 - MPMX20_03129 0.76 +1.0
3,288,865 - MPMX20_03129 0.79 -1.0
3,288,865 - MPMX20_03129 0.79 -1.2
3,288,867 - MPMX20_03129 0.79 +0.2
3,288,888 - MPMX20_03129 0.81 +0.1
3,288,964 + MPMX20_03129 0.89 +0.6
3,288,972 - MPMX20_03129 0.89 +2.6
3,289,016 + +0.2
3,289,024 - -0.0
3,289,061 + -1.3
3,289,061 + +0.4
3,289,061 + -0.5
3,289,061 + +0.6
3,289,066 - -0.6
3,289,069 - -0.0
3,289,161 - -0.7
3,289,164 + -0.4
3,289,174 - +2.2
3,289,174 - -0.9
3,289,174 - +0.5
3,289,174 - -0.3
3,289,174 - -1.8
3,289,269 + MPMX20_03130 0.14 -1.0
3,289,277 - MPMX20_03130 0.15 -0.9
3,289,277 - MPMX20_03130 0.15 +2.8
3,289,279 + MPMX20_03130 0.16 -1.2
3,289,279 + MPMX20_03130 0.16 -0.7
3,289,279 + MPMX20_03130 0.16 +0.0
3,289,279 + MPMX20_03130 0.16 -0.6
3,289,279 + MPMX20_03130 0.16 +0.4
3,289,279 + MPMX20_03130 0.16 -1.5
3,289,279 + MPMX20_03130 0.16 -0.3
3,289,279 + MPMX20_03130 0.16 -1.7
3,289,279 + MPMX20_03130 0.16 +0.6
3,289,279 + MPMX20_03130 0.16 -1.3
3,289,279 + MPMX20_03130 0.16 -0.8
3,289,279 + MPMX20_03130 0.16 -0.8
3,289,279 + MPMX20_03130 0.16 -0.4
3,289,279 + MPMX20_03130 0.16 -1.2
3,289,287 - MPMX20_03130 0.16 +0.6
3,289,287 - MPMX20_03130 0.16 -0.0
3,289,287 - MPMX20_03130 0.16 +0.6
3,289,287 - MPMX20_03130 0.16 -0.2
3,289,287 - MPMX20_03130 0.16 -1.5
3,289,287 - MPMX20_03130 0.16 -0.8
3,289,287 - MPMX20_03130 0.16 -0.8
3,289,287 - MPMX20_03130 0.16 +0.6
3,289,287 - MPMX20_03130 0.16 +0.1
3,289,287 - MPMX20_03130 0.16 +0.2
3,289,287 - MPMX20_03130 0.16 -1.6
3,289,287 - MPMX20_03130 0.16 +0.2
3,289,287 - MPMX20_03130 0.16 -0.4
3,289,287 - MPMX20_03130 0.16 +1.2
3,289,547 + MPMX20_03130 0.47 +0.6
3,289,547 + MPMX20_03130 0.47 -0.9
3,289,595 + MPMX20_03130 0.52 +1.6
3,289,687 + MPMX20_03130 0.63 -1.4
3,289,720 + MPMX20_03130 0.67 +1.1
3,289,728 - MPMX20_03130 0.68 -0.6
3,289,948 + +0.5
3,289,951 - -0.9
3,289,951 - -1.1
3,290,095 - +0.9
3,290,097 + -1.4
3,290,097 + +0.3
3,290,097 + +0.4
3,290,097 + -1.5
3,290,103 - -1.9
3,290,109 + -2.7
3,290,110 - +1.0
3,290,152 + -0.2
3,290,246 - MPMX20_03131 0.12 +1.5
3,290,255 + MPMX20_03131 0.12 +1.6
3,290,263 - MPMX20_03131 0.13 +0.1
3,290,265 + MPMX20_03131 0.13 +0.6
3,290,294 - MPMX20_03131 0.14 -0.5
3,290,338 + MPMX20_03131 0.17 -1.7
3,290,346 - MPMX20_03131 0.18 +0.9
3,290,465 + MPMX20_03131 0.25 -0.3
3,290,465 + MPMX20_03131 0.25 +1.2
3,290,472 + MPMX20_03131 0.25 +2.3
3,290,473 - MPMX20_03131 0.25 +3.5
3,290,490 - MPMX20_03131 0.26 -1.0
3,290,513 - MPMX20_03131 0.27 -0.8
3,290,556 + MPMX20_03131 0.30 +0.2
3,290,556 + MPMX20_03131 0.30 -0.4
3,290,559 - MPMX20_03131 0.30 -1.0
3,290,603 + MPMX20_03131 0.33 +1.0
3,290,611 - MPMX20_03131 0.33 +1.2
3,290,611 - MPMX20_03131 0.33 -0.2
3,290,620 - MPMX20_03131 0.34 -0.8
3,290,662 - MPMX20_03131 0.36 -0.3
3,290,710 + MPMX20_03131 0.39 -0.4
3,290,710 + MPMX20_03131 0.39 -1.4
3,290,712 + MPMX20_03131 0.39 +0.4
3,290,712 + MPMX20_03131 0.39 +0.2
3,290,712 + MPMX20_03131 0.39 +3.8
3,290,718 - MPMX20_03131 0.40 +0.2
3,290,720 - MPMX20_03131 0.40 -0.3
3,290,720 - MPMX20_03131 0.40 +0.2
3,290,905 + MPMX20_03131 0.51 +0.7
3,290,997 + MPMX20_03131 0.56 -1.2

Or see this region's nucleotide sequence