Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01092

Experiment: TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01090 and MPMX20_01091 are separated by 58 nucleotidesMPMX20_01091 and MPMX20_01092 are separated by 28 nucleotidesMPMX20_01092 and MPMX20_01093 are separated by 24 nucleotidesMPMX20_01093 and MPMX20_01094 overlap by 4 nucleotides MPMX20_01090: MPMX20_01090 - Chaperedoxin, at 1,149,752 to 1,150,606 _01090 MPMX20_01091: MPMX20_01091 - hypothetical protein, at 1,150,665 to 1,151,435 _01091 MPMX20_01092: MPMX20_01092 - Thioesterase 1/protease 1/lysophospholipase L1, at 1,151,464 to 1,152,033 _01092 MPMX20_01093: MPMX20_01093 - Lipoprotein-releasing system ATP-binding protein LolD, at 1,152,058 to 1,152,744 _01093 MPMX20_01094: MPMX20_01094 - hypothetical protein, at 1,152,741 to 1,155,155 _01094 Position (kb) 1151 1152 1153Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1150.466 kb on + strand, within MPMX20_01090at 1150.496 kb on + strand, within MPMX20_01090at 1150.533 kb on + strandat 1150.539 kb on + strandat 1150.547 kb on - strandat 1150.547 kb on - strandat 1150.549 kb on + strandat 1150.549 kb on + strandat 1150.557 kb on - strandat 1150.557 kb on - strandat 1150.559 kb on + strandat 1150.604 kb on + strandat 1150.709 kb on + strandat 1150.739 kb on - strandat 1150.790 kb on + strand, within MPMX20_01091at 1150.805 kb on + strand, within MPMX20_01091at 1150.874 kb on - strand, within MPMX20_01091at 1150.893 kb on + strand, within MPMX20_01091at 1150.893 kb on + strand, within MPMX20_01091at 1150.899 kb on + strand, within MPMX20_01091at 1150.919 kb on + strand, within MPMX20_01091at 1150.949 kb on - strand, within MPMX20_01091at 1150.954 kb on - strand, within MPMX20_01091at 1150.974 kb on - strand, within MPMX20_01091at 1151.010 kb on + strand, within MPMX20_01091at 1151.022 kb on + strand, within MPMX20_01091at 1151.041 kb on - strand, within MPMX20_01091at 1151.041 kb on - strand, within MPMX20_01091at 1151.155 kb on - strand, within MPMX20_01091at 1151.171 kb on - strand, within MPMX20_01091at 1151.171 kb on - strand, within MPMX20_01091at 1151.232 kb on - strand, within MPMX20_01091at 1151.271 kb on + strand, within MPMX20_01091at 1151.271 kb on + strand, within MPMX20_01091at 1151.271 kb on + strand, within MPMX20_01091at 1151.297 kb on + strand, within MPMX20_01091at 1151.305 kb on - strand, within MPMX20_01091at 1151.437 kb on + strandat 1151.444 kb on - strandat 1151.446 kb on + strandat 1151.446 kb on + strandat 1151.464 kb on - strandat 1151.563 kb on + strand, within MPMX20_01092at 1151.571 kb on + strand, within MPMX20_01092at 1151.631 kb on + strand, within MPMX20_01092at 1151.631 kb on + strand, within MPMX20_01092at 1151.631 kb on + strand, within MPMX20_01092at 1151.631 kb on + strand, within MPMX20_01092at 1151.639 kb on - strand, within MPMX20_01092at 1151.639 kb on - strand, within MPMX20_01092at 1151.639 kb on - strand, within MPMX20_01092at 1151.678 kb on - strand, within MPMX20_01092at 1151.745 kb on + strand, within MPMX20_01092at 1151.752 kb on + strand, within MPMX20_01092at 1151.760 kb on - strand, within MPMX20_01092at 1151.760 kb on - strand, within MPMX20_01092at 1151.780 kb on - strand, within MPMX20_01092at 1151.834 kb on + strand, within MPMX20_01092at 1151.863 kb on + strand, within MPMX20_01092at 1151.871 kb on - strand, within MPMX20_01092at 1151.909 kb on + strand, within MPMX20_01092at 1151.917 kb on - strand, within MPMX20_01092at 1151.937 kb on + strand, within MPMX20_01092at 1151.937 kb on + strand, within MPMX20_01092at 1151.937 kb on + strand, within MPMX20_01092at 1151.937 kb on + strand, within MPMX20_01092at 1151.940 kb on - strand, within MPMX20_01092at 1151.950 kb on - strand, within MPMX20_01092at 1151.950 kb on - strand, within MPMX20_01092at 1151.997 kb on + strandat 1151.997 kb on + strandat 1152.106 kb on + strandat 1152.120 kb on - strandat 1152.141 kb on + strand, within MPMX20_01093at 1152.189 kb on + strand, within MPMX20_01093at 1152.253 kb on - strand, within MPMX20_01093at 1152.253 kb on - strand, within MPMX20_01093at 1152.294 kb on + strand, within MPMX20_01093at 1152.405 kb on - strand, within MPMX20_01093at 1152.426 kb on - strand, within MPMX20_01093at 1152.441 kb on + strand, within MPMX20_01093at 1152.456 kb on + strand, within MPMX20_01093at 1152.456 kb on + strand, within MPMX20_01093at 1152.498 kb on + strand, within MPMX20_01093at 1152.516 kb on - strand, within MPMX20_01093at 1152.516 kb on - strand, within MPMX20_01093at 1152.523 kb on + strand, within MPMX20_01093at 1152.523 kb on + strand, within MPMX20_01093at 1152.523 kb on + strand, within MPMX20_01093at 1152.523 kb on + strand, within MPMX20_01093at 1152.523 kb on + strand, within MPMX20_01093at 1152.525 kb on - strand, within MPMX20_01093at 1152.531 kb on - strand, within MPMX20_01093at 1152.531 kb on - strand, within MPMX20_01093at 1152.531 kb on - strand, within MPMX20_01093at 1152.531 kb on - strand, within MPMX20_01093at 1152.553 kb on + strand, within MPMX20_01093at 1152.561 kb on - strand, within MPMX20_01093at 1152.643 kb on - strand, within MPMX20_01093at 1152.643 kb on - strand, within MPMX20_01093at 1152.655 kb on - strand, within MPMX20_01093at 1152.735 kb on - strandat 1152.783 kb on - strandat 1152.844 kb on - strandat 1152.849 kb on - strandat 1152.872 kb on - strandat 1152.873 kb on - strandat 1152.997 kb on + strand, within MPMX20_01094

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,150,466 + MPMX20_01090 0.84 +0.1
1,150,496 + MPMX20_01090 0.87 -0.4
1,150,533 + -0.4
1,150,539 + -1.2
1,150,547 - -1.3
1,150,547 - +0.5
1,150,549 + +0.6
1,150,549 + -0.3
1,150,557 - -0.5
1,150,557 - -1.3
1,150,559 + +4.2
1,150,604 + +0.6
1,150,709 + +0.1
1,150,739 - -0.8
1,150,790 + MPMX20_01091 0.16 -0.5
1,150,805 + MPMX20_01091 0.18 -0.3
1,150,874 - MPMX20_01091 0.27 +2.1
1,150,893 + MPMX20_01091 0.30 +2.8
1,150,893 + MPMX20_01091 0.30 -0.8
1,150,899 + MPMX20_01091 0.30 +0.9
1,150,919 + MPMX20_01091 0.33 -0.7
1,150,949 - MPMX20_01091 0.37 +0.1
1,150,954 - MPMX20_01091 0.37 -1.1
1,150,974 - MPMX20_01091 0.40 +0.3
1,151,010 + MPMX20_01091 0.45 -1.9
1,151,022 + MPMX20_01091 0.46 -0.3
1,151,041 - MPMX20_01091 0.49 -1.0
1,151,041 - MPMX20_01091 0.49 +0.5
1,151,155 - MPMX20_01091 0.64 -0.1
1,151,171 - MPMX20_01091 0.66 -1.4
1,151,171 - MPMX20_01091 0.66 -0.4
1,151,232 - MPMX20_01091 0.74 +0.5
1,151,271 + MPMX20_01091 0.79 -1.1
1,151,271 + MPMX20_01091 0.79 +0.5
1,151,271 + MPMX20_01091 0.79 -0.0
1,151,297 + MPMX20_01091 0.82 -0.9
1,151,305 - MPMX20_01091 0.83 -1.2
1,151,437 + -0.1
1,151,444 - -0.2
1,151,446 + +1.2
1,151,446 + -1.8
1,151,464 - +0.5
1,151,563 + MPMX20_01092 0.17 -1.5
1,151,571 + MPMX20_01092 0.19 -1.3
1,151,631 + MPMX20_01092 0.29 -0.4
1,151,631 + MPMX20_01092 0.29 -1.3
1,151,631 + MPMX20_01092 0.29 +0.7
1,151,631 + MPMX20_01092 0.29 -0.9
1,151,639 - MPMX20_01092 0.31 +0.5
1,151,639 - MPMX20_01092 0.31 +0.5
1,151,639 - MPMX20_01092 0.31 -0.9
1,151,678 - MPMX20_01092 0.38 -1.9
1,151,745 + MPMX20_01092 0.49 -0.1
1,151,752 + MPMX20_01092 0.51 -0.2
1,151,760 - MPMX20_01092 0.52 -2.3
1,151,760 - MPMX20_01092 0.52 -0.6
1,151,780 - MPMX20_01092 0.55 +0.5
1,151,834 + MPMX20_01092 0.65 +0.7
1,151,863 + MPMX20_01092 0.70 -0.4
1,151,871 - MPMX20_01092 0.71 +0.5
1,151,909 + MPMX20_01092 0.78 -1.3
1,151,917 - MPMX20_01092 0.79 -0.9
1,151,937 + MPMX20_01092 0.83 -0.3
1,151,937 + MPMX20_01092 0.83 -1.2
1,151,937 + MPMX20_01092 0.83 -0.4
1,151,937 + MPMX20_01092 0.83 +0.2
1,151,940 - MPMX20_01092 0.84 +0.1
1,151,950 - MPMX20_01092 0.85 -1.6
1,151,950 - MPMX20_01092 0.85 -2.1
1,151,997 + -0.8
1,151,997 + +0.2
1,152,106 + +0.5
1,152,120 - -1.5
1,152,141 + MPMX20_01093 0.12 +2.1
1,152,189 + MPMX20_01093 0.19 -2.1
1,152,253 - MPMX20_01093 0.28 +1.8
1,152,253 - MPMX20_01093 0.28 -0.3
1,152,294 + MPMX20_01093 0.34 -1.0
1,152,405 - MPMX20_01093 0.51 -0.6
1,152,426 - MPMX20_01093 0.54 -0.3
1,152,441 + MPMX20_01093 0.56 +0.6
1,152,456 + MPMX20_01093 0.58 -1.0
1,152,456 + MPMX20_01093 0.58 -0.9
1,152,498 + MPMX20_01093 0.64 +2.6
1,152,516 - MPMX20_01093 0.67 +0.7
1,152,516 - MPMX20_01093 0.67 +0.2
1,152,523 + MPMX20_01093 0.68 +1.2
1,152,523 + MPMX20_01093 0.68 -0.8
1,152,523 + MPMX20_01093 0.68 -0.5
1,152,523 + MPMX20_01093 0.68 -0.6
1,152,523 + MPMX20_01093 0.68 +0.0
1,152,525 - MPMX20_01093 0.68 -0.8
1,152,531 - MPMX20_01093 0.69 +0.3
1,152,531 - MPMX20_01093 0.69 -0.7
1,152,531 - MPMX20_01093 0.69 -1.7
1,152,531 - MPMX20_01093 0.69 -1.8
1,152,553 + MPMX20_01093 0.72 -1.7
1,152,561 - MPMX20_01093 0.73 +0.2
1,152,643 - MPMX20_01093 0.85 -0.5
1,152,643 - MPMX20_01093 0.85 +0.5
1,152,655 - MPMX20_01093 0.87 -1.0
1,152,735 - +0.8
1,152,783 - -1.9
1,152,844 - -0.1
1,152,849 - +0.1
1,152,872 - -1.8
1,152,873 - -0.1
1,152,997 + MPMX20_01094 0.11 -0.9

Or see this region's nucleotide sequence