Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00787

Experiment: TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_00785 and MPMX20_00786 are separated by 1 nucleotidesMPMX20_00786 and MPMX20_00787 overlap by 4 nucleotidesMPMX20_00787 and MPMX20_00788 are separated by 63 nucleotides MPMX20_00785: MPMX20_00785 - D-alanine--D-alanine ligase B, at 821,309 to 822,229 _00785 MPMX20_00786: MPMX20_00786 - Cell division protein FtsQ, at 822,231 to 823,073 _00786 MPMX20_00787: MPMX20_00787 - Cell division protein FtsA, at 823,070 to 824,326 _00787 MPMX20_00788: MPMX20_00788 - Cell division protein FtsZ, at 824,390 to 825,541 _00788 Position (kb) 823 824 825Strain fitness (log2 ratio) -1 0 1at 822.214 kb on + strandat 822.233 kb on + strandat 823.052 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
remove
822,214 + -0.6
822,233 + -1.4
823,052 + +0.8

Or see this region's nucleotide sequence