Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03822

Experiment: M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03821 and MPMX20_03822 are separated by 18 nucleotidesMPMX20_03822 and MPMX20_03823 overlap by 23 nucleotidesMPMX20_03823 and MPMX20_03824 are separated by 2 nucleotides MPMX20_03821: MPMX20_03821 - Nucleoside permease NupG, at 4,022,994 to 4,024,250 _03821 MPMX20_03822: MPMX20_03822 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase, at 4,024,269 to 4,025,078 _03822 MPMX20_03823: MPMX20_03823 - Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase, at 4,025,056 to 4,025,595 _03823 MPMX20_03824: MPMX20_03824 - Citrate lyase alpha chain, at 4,025,598 to 4,027,115 _03824 Position (kb) 4024 4025 4026Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 4023.278 kb on + strand, within MPMX20_03821at 4023.319 kb on + strand, within MPMX20_03821at 4023.319 kb on + strand, within MPMX20_03821at 4023.327 kb on - strand, within MPMX20_03821at 4023.329 kb on + strand, within MPMX20_03821at 4023.329 kb on + strand, within MPMX20_03821at 4023.329 kb on + strand, within MPMX20_03821at 4023.337 kb on - strand, within MPMX20_03821at 4023.438 kb on + strand, within MPMX20_03821at 4023.438 kb on + strand, within MPMX20_03821at 4023.466 kb on + strand, within MPMX20_03821at 4023.476 kb on + strand, within MPMX20_03821at 4023.487 kb on + strand, within MPMX20_03821at 4023.495 kb on - strand, within MPMX20_03821at 4023.495 kb on - strand, within MPMX20_03821at 4023.527 kb on - strand, within MPMX20_03821at 4023.603 kb on - strand, within MPMX20_03821at 4023.603 kb on - strand, within MPMX20_03821at 4023.663 kb on - strand, within MPMX20_03821at 4023.696 kb on + strand, within MPMX20_03821at 4023.833 kb on + strand, within MPMX20_03821at 4023.851 kb on + strand, within MPMX20_03821at 4024.026 kb on + strand, within MPMX20_03821at 4024.031 kb on + strand, within MPMX20_03821at 4024.063 kb on + strand, within MPMX20_03821at 4024.068 kb on + strand, within MPMX20_03821at 4024.071 kb on - strand, within MPMX20_03821at 4024.085 kb on - strand, within MPMX20_03821at 4024.103 kb on + strand, within MPMX20_03821at 4024.103 kb on + strand, within MPMX20_03821at 4024.170 kb on + strandat 4024.178 kb on - strandat 4024.196 kb on + strandat 4024.204 kb on - strandat 4024.204 kb on - strandat 4024.204 kb on - strandat 4024.265 kb on + strandat 4024.273 kb on - strandat 4024.339 kb on - strandat 4024.367 kb on + strand, within MPMX20_03822at 4024.375 kb on - strand, within MPMX20_03822at 4024.416 kb on + strand, within MPMX20_03822at 4024.416 kb on + strand, within MPMX20_03822at 4024.419 kb on - strand, within MPMX20_03822at 4024.429 kb on - strand, within MPMX20_03822at 4024.459 kb on + strand, within MPMX20_03822at 4024.459 kb on + strand, within MPMX20_03822at 4024.467 kb on + strand, within MPMX20_03822at 4024.493 kb on + strand, within MPMX20_03822at 4024.550 kb on - strand, within MPMX20_03822at 4024.581 kb on + strand, within MPMX20_03822at 4024.615 kb on + strand, within MPMX20_03822at 4024.627 kb on + strand, within MPMX20_03822at 4024.630 kb on - strand, within MPMX20_03822at 4024.660 kb on - strand, within MPMX20_03822at 4024.669 kb on + strand, within MPMX20_03822at 4024.671 kb on - strand, within MPMX20_03822at 4024.671 kb on - strand, within MPMX20_03822at 4024.684 kb on + strand, within MPMX20_03822at 4024.800 kb on - strand, within MPMX20_03822at 4024.859 kb on - strand, within MPMX20_03822at 4024.866 kb on + strand, within MPMX20_03822at 4024.873 kb on - strand, within MPMX20_03822at 4024.874 kb on - strand, within MPMX20_03822at 4024.874 kb on - strand, within MPMX20_03822at 4024.875 kb on - strand, within MPMX20_03822at 4024.877 kb on + strand, within MPMX20_03822at 4024.877 kb on + strand, within MPMX20_03822at 4024.918 kb on - strand, within MPMX20_03822at 4024.968 kb on - strand, within MPMX20_03822at 4024.968 kb on - strand, within MPMX20_03822at 4024.973 kb on - strand, within MPMX20_03822at 4024.982 kb on - strand, within MPMX20_03822at 4025.135 kb on + strand, within MPMX20_03823at 4025.148 kb on - strand, within MPMX20_03823at 4025.148 kb on - strand, within MPMX20_03823at 4025.179 kb on - strand, within MPMX20_03823at 4025.209 kb on + strand, within MPMX20_03823at 4025.214 kb on + strand, within MPMX20_03823at 4025.217 kb on - strand, within MPMX20_03823at 4025.217 kb on - strand, within MPMX20_03823at 4025.222 kb on - strand, within MPMX20_03823at 4025.256 kb on + strand, within MPMX20_03823at 4025.271 kb on + strand, within MPMX20_03823at 4025.279 kb on - strand, within MPMX20_03823at 4025.352 kb on + strand, within MPMX20_03823at 4025.359 kb on + strand, within MPMX20_03823at 4025.367 kb on - strand, within MPMX20_03823at 4025.372 kb on - strand, within MPMX20_03823at 4025.487 kb on + strand, within MPMX20_03823at 4025.495 kb on - strand, within MPMX20_03823at 4025.553 kb on + strandat 4025.567 kb on - strandat 4025.572 kb on - strandat 4025.603 kb on + strandat 4025.612 kb on + strandat 4025.612 kb on + strandat 4025.620 kb on - strandat 4025.620 kb on - strandat 4025.620 kb on - strandat 4025.670 kb on + strandat 4025.715 kb on + strandat 4025.832 kb on + strand, within MPMX20_03824at 4025.832 kb on - strand, within MPMX20_03824at 4025.834 kb on + strand, within MPMX20_03824at 4025.884 kb on - strand, within MPMX20_03824at 4025.899 kb on - strand, within MPMX20_03824at 4026.044 kb on + strand, within MPMX20_03824at 4026.061 kb on - strand, within MPMX20_03824

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,023,278 + MPMX20_03821 0.23 -0.3
4,023,319 + MPMX20_03821 0.26 +1.5
4,023,319 + MPMX20_03821 0.26 -0.3
4,023,327 - MPMX20_03821 0.26 -0.7
4,023,329 + MPMX20_03821 0.27 -0.7
4,023,329 + MPMX20_03821 0.27 +0.9
4,023,329 + MPMX20_03821 0.27 -0.6
4,023,337 - MPMX20_03821 0.27 -1.5
4,023,438 + MPMX20_03821 0.35 +0.4
4,023,438 + MPMX20_03821 0.35 +0.7
4,023,466 + MPMX20_03821 0.38 +0.2
4,023,476 + MPMX20_03821 0.38 -1.2
4,023,487 + MPMX20_03821 0.39 -1.7
4,023,495 - MPMX20_03821 0.40 -0.5
4,023,495 - MPMX20_03821 0.40 -0.2
4,023,527 - MPMX20_03821 0.42 +1.1
4,023,603 - MPMX20_03821 0.48 -0.5
4,023,603 - MPMX20_03821 0.48 -0.3
4,023,663 - MPMX20_03821 0.53 -0.8
4,023,696 + MPMX20_03821 0.56 -0.3
4,023,833 + MPMX20_03821 0.67 -1.5
4,023,851 + MPMX20_03821 0.68 +0.4
4,024,026 + MPMX20_03821 0.82 +0.7
4,024,031 + MPMX20_03821 0.82 +1.5
4,024,063 + MPMX20_03821 0.85 -0.7
4,024,068 + MPMX20_03821 0.85 -2.5
4,024,071 - MPMX20_03821 0.86 -0.1
4,024,085 - MPMX20_03821 0.87 +0.8
4,024,103 + MPMX20_03821 0.88 -0.2
4,024,103 + MPMX20_03821 0.88 +1.2
4,024,170 + -0.1
4,024,178 - -2.2
4,024,196 + +1.6
4,024,204 - -0.4
4,024,204 - +0.6
4,024,204 - +1.0
4,024,265 + +3.3
4,024,273 - -0.2
4,024,339 - +0.6
4,024,367 + MPMX20_03822 0.12 +0.4
4,024,375 - MPMX20_03822 0.13 +0.3
4,024,416 + MPMX20_03822 0.18 +1.3
4,024,416 + MPMX20_03822 0.18 -0.2
4,024,419 - MPMX20_03822 0.19 -1.4
4,024,429 - MPMX20_03822 0.20 -1.1
4,024,459 + MPMX20_03822 0.23 -0.8
4,024,459 + MPMX20_03822 0.23 -1.1
4,024,467 + MPMX20_03822 0.24 +0.4
4,024,493 + MPMX20_03822 0.28 +0.0
4,024,550 - MPMX20_03822 0.35 +0.6
4,024,581 + MPMX20_03822 0.39 +0.2
4,024,615 + MPMX20_03822 0.43 -0.2
4,024,627 + MPMX20_03822 0.44 -0.0
4,024,630 - MPMX20_03822 0.45 +0.3
4,024,660 - MPMX20_03822 0.48 +1.0
4,024,669 + MPMX20_03822 0.49 +1.3
4,024,671 - MPMX20_03822 0.50 +0.7
4,024,671 - MPMX20_03822 0.50 -0.4
4,024,684 + MPMX20_03822 0.51 -0.8
4,024,800 - MPMX20_03822 0.66 -0.0
4,024,859 - MPMX20_03822 0.73 -1.0
4,024,866 + MPMX20_03822 0.74 -1.0
4,024,873 - MPMX20_03822 0.75 -0.8
4,024,874 - MPMX20_03822 0.75 +1.1
4,024,874 - MPMX20_03822 0.75 +0.6
4,024,875 - MPMX20_03822 0.75 +0.6
4,024,877 + MPMX20_03822 0.75 -3.4
4,024,877 + MPMX20_03822 0.75 +1.3
4,024,918 - MPMX20_03822 0.80 +1.0
4,024,968 - MPMX20_03822 0.86 +0.8
4,024,968 - MPMX20_03822 0.86 -0.8
4,024,973 - MPMX20_03822 0.87 -0.2
4,024,982 - MPMX20_03822 0.88 -0.4
4,025,135 + MPMX20_03823 0.15 +3.3
4,025,148 - MPMX20_03823 0.17 +6.4
4,025,148 - MPMX20_03823 0.17 -0.5
4,025,179 - MPMX20_03823 0.23 +1.6
4,025,209 + MPMX20_03823 0.28 -0.2
4,025,214 + MPMX20_03823 0.29 +0.5
4,025,217 - MPMX20_03823 0.30 -0.6
4,025,217 - MPMX20_03823 0.30 +0.5
4,025,222 - MPMX20_03823 0.31 +0.3
4,025,256 + MPMX20_03823 0.37 +0.2
4,025,271 + MPMX20_03823 0.40 +0.1
4,025,279 - MPMX20_03823 0.41 -0.4
4,025,352 + MPMX20_03823 0.55 +0.8
4,025,359 + MPMX20_03823 0.56 +0.4
4,025,367 - MPMX20_03823 0.58 -0.8
4,025,372 - MPMX20_03823 0.59 -0.3
4,025,487 + MPMX20_03823 0.80 -0.0
4,025,495 - MPMX20_03823 0.81 -1.7
4,025,553 + -0.8
4,025,567 - -0.7
4,025,572 - -0.5
4,025,603 + -2.0
4,025,612 + -1.3
4,025,612 + -0.3
4,025,620 - +1.7
4,025,620 - +0.4
4,025,620 - +3.0
4,025,670 + -1.0
4,025,715 + -0.5
4,025,832 + MPMX20_03824 0.15 -2.5
4,025,832 - MPMX20_03824 0.15 -1.5
4,025,834 + MPMX20_03824 0.16 -0.3
4,025,884 - MPMX20_03824 0.19 +0.4
4,025,899 - MPMX20_03824 0.20 +1.0
4,026,044 + MPMX20_03824 0.29 +0.3
4,026,061 - MPMX20_03824 0.31 -0.1

Or see this region's nucleotide sequence