Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02787

Experiment: M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02785 and MPMX20_02786 are separated by 10 nucleotidesMPMX20_02786 and MPMX20_02787 are separated by 17 nucleotidesMPMX20_02787 and MPMX20_02788 overlap by 4 nucleotidesMPMX20_02788 and MPMX20_02789 are separated by 19 nucleotides MPMX20_02785: MPMX20_02785 - Protein phosphatase CheZ, at 2,941,251 to 2,941,898 _02785 MPMX20_02786: MPMX20_02786 - Chemotaxis protein CheY, at 2,941,909 to 2,942,298 _02786 MPMX20_02787: MPMX20_02787 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 2,942,316 to 2,943,365 _02787 MPMX20_02788: MPMX20_02788 - Chemotaxis protein methyltransferase, at 2,943,362 to 2,944,228 _02788 MPMX20_02789: MPMX20_02789 - Methyl-accepting chemotaxis protein IV, at 2,944,248 to 2,945,849 _02789 Position (kb) 2942 2943 2944Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8at 2941.330 kb on + strand, within MPMX20_02785at 2941.333 kb on + strand, within MPMX20_02785at 2941.346 kb on - strand, within MPMX20_02785at 2941.441 kb on - strand, within MPMX20_02785at 2941.452 kb on + strand, within MPMX20_02785at 2941.512 kb on + strand, within MPMX20_02785at 2941.520 kb on - strand, within MPMX20_02785at 2941.529 kb on - strand, within MPMX20_02785at 2941.576 kb on - strand, within MPMX20_02785at 2941.583 kb on - strand, within MPMX20_02785at 2941.673 kb on + strand, within MPMX20_02785at 2941.673 kb on + strand, within MPMX20_02785at 2941.681 kb on - strand, within MPMX20_02785at 2941.683 kb on + strand, within MPMX20_02785at 2941.691 kb on - strand, within MPMX20_02785at 2941.713 kb on + strand, within MPMX20_02785at 2941.721 kb on - strand, within MPMX20_02785at 2941.721 kb on - strand, within MPMX20_02785at 2941.721 kb on - strand, within MPMX20_02785at 2941.728 kb on + strand, within MPMX20_02785at 2941.731 kb on - strand, within MPMX20_02785at 2941.731 kb on - strand, within MPMX20_02785at 2941.736 kb on - strand, within MPMX20_02785at 2941.822 kb on - strand, within MPMX20_02785at 2941.836 kb on - strandat 2941.964 kb on + strand, within MPMX20_02786at 2941.996 kb on + strand, within MPMX20_02786at 2942.095 kb on - strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.175 kb on - strand, within MPMX20_02786at 2942.248 kb on - strand, within MPMX20_02786at 2942.252 kb on + strand, within MPMX20_02786at 2942.323 kb on + strandat 2942.331 kb on - strandat 2942.341 kb on - strandat 2942.508 kb on + strand, within MPMX20_02787at 2942.671 kb on - strand, within MPMX20_02787at 2942.693 kb on - strand, within MPMX20_02787at 2942.739 kb on + strand, within MPMX20_02787at 2942.767 kb on - strand, within MPMX20_02787at 2942.791 kb on + strand, within MPMX20_02787at 2942.791 kb on - strand, within MPMX20_02787at 2942.907 kb on + strand, within MPMX20_02787at 2942.915 kb on - strand, within MPMX20_02787at 2942.929 kb on + strand, within MPMX20_02787at 2943.086 kb on + strand, within MPMX20_02787at 2943.121 kb on - strand, within MPMX20_02787at 2943.406 kb on + strandat 2943.463 kb on + strand, within MPMX20_02788at 2943.468 kb on + strand, within MPMX20_02788at 2943.468 kb on + strand, within MPMX20_02788at 2943.468 kb on + strand, within MPMX20_02788at 2943.476 kb on - strand, within MPMX20_02788at 2943.615 kb on + strand, within MPMX20_02788at 2943.641 kb on + strand, within MPMX20_02788at 2943.658 kb on + strand, within MPMX20_02788at 2943.658 kb on + strand, within MPMX20_02788at 2943.675 kb on + strand, within MPMX20_02788at 2943.689 kb on + strand, within MPMX20_02788at 2943.697 kb on - strand, within MPMX20_02788at 2943.699 kb on - strand, within MPMX20_02788at 2943.773 kb on + strand, within MPMX20_02788at 2943.788 kb on - strand, within MPMX20_02788at 2943.822 kb on - strand, within MPMX20_02788at 2943.834 kb on + strand, within MPMX20_02788at 2943.844 kb on - strand, within MPMX20_02788at 2943.867 kb on + strand, within MPMX20_02788at 2943.867 kb on + strand, within MPMX20_02788at 2943.880 kb on + strand, within MPMX20_02788at 2943.918 kb on + strand, within MPMX20_02788at 2943.920 kb on + strand, within MPMX20_02788at 2943.952 kb on + strand, within MPMX20_02788at 2943.960 kb on - strand, within MPMX20_02788at 2943.985 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.998 kb on - strand, within MPMX20_02788at 2944.003 kb on - strand, within MPMX20_02788at 2944.003 kb on - strand, within MPMX20_02788at 2944.003 kb on - strand, within MPMX20_02788at 2944.042 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.192 kb on + strandat 2944.256 kb on + strandat 2944.267 kb on + strandat 2944.275 kb on - strandat 2944.313 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,941,330 + MPMX20_02785 0.12 +0.3
2,941,333 + MPMX20_02785 0.13 -1.0
2,941,346 - MPMX20_02785 0.15 -1.0
2,941,441 - MPMX20_02785 0.29 +1.1
2,941,452 + MPMX20_02785 0.31 +0.6
2,941,512 + MPMX20_02785 0.40 +0.7
2,941,520 - MPMX20_02785 0.42 -1.4
2,941,529 - MPMX20_02785 0.43 -1.3
2,941,576 - MPMX20_02785 0.50 +1.1
2,941,583 - MPMX20_02785 0.51 -1.4
2,941,673 + MPMX20_02785 0.65 +0.7
2,941,673 + MPMX20_02785 0.65 -2.1
2,941,681 - MPMX20_02785 0.66 +0.3
2,941,683 + MPMX20_02785 0.67 +0.1
2,941,691 - MPMX20_02785 0.68 -0.6
2,941,713 + MPMX20_02785 0.71 +0.5
2,941,721 - MPMX20_02785 0.73 -0.7
2,941,721 - MPMX20_02785 0.73 +2.4
2,941,721 - MPMX20_02785 0.73 -1.5
2,941,728 + MPMX20_02785 0.74 -1.9
2,941,731 - MPMX20_02785 0.74 +0.7
2,941,731 - MPMX20_02785 0.74 -0.1
2,941,736 - MPMX20_02785 0.75 -0.1
2,941,822 - MPMX20_02785 0.88 -0.7
2,941,836 - +1.2
2,941,964 + MPMX20_02786 0.14 +2.3
2,941,996 + MPMX20_02786 0.22 -0.7
2,942,095 - MPMX20_02786 0.48 +1.4
2,942,097 + MPMX20_02786 0.48 -0.8
2,942,097 + MPMX20_02786 0.48 +0.2
2,942,097 + MPMX20_02786 0.48 +7.8
2,942,097 + MPMX20_02786 0.48 -1.5
2,942,097 + MPMX20_02786 0.48 -0.3
2,942,105 - MPMX20_02786 0.50 -1.4
2,942,105 - MPMX20_02786 0.50 -1.6
2,942,105 - MPMX20_02786 0.50 -1.2
2,942,105 - MPMX20_02786 0.50 +0.8
2,942,105 - MPMX20_02786 0.50 +0.5
2,942,105 - MPMX20_02786 0.50 +1.0
2,942,175 - MPMX20_02786 0.68 -2.1
2,942,248 - MPMX20_02786 0.87 -0.5
2,942,252 + MPMX20_02786 0.88 -0.1
2,942,323 + +0.7
2,942,331 - -1.7
2,942,341 - -0.1
2,942,508 + MPMX20_02787 0.18 -0.9
2,942,671 - MPMX20_02787 0.34 -0.4
2,942,693 - MPMX20_02787 0.36 -0.6
2,942,739 + MPMX20_02787 0.40 +1.7
2,942,767 - MPMX20_02787 0.43 -1.4
2,942,791 + MPMX20_02787 0.45 -1.6
2,942,791 - MPMX20_02787 0.45 -0.9
2,942,907 + MPMX20_02787 0.56 -1.2
2,942,915 - MPMX20_02787 0.57 -0.3
2,942,929 + MPMX20_02787 0.58 -1.1
2,943,086 + MPMX20_02787 0.73 +0.7
2,943,121 - MPMX20_02787 0.77 +1.3
2,943,406 + -1.0
2,943,463 + MPMX20_02788 0.12 -0.8
2,943,468 + MPMX20_02788 0.12 +2.3
2,943,468 + MPMX20_02788 0.12 +0.3
2,943,468 + MPMX20_02788 0.12 -0.4
2,943,476 - MPMX20_02788 0.13 +1.3
2,943,615 + MPMX20_02788 0.29 -0.2
2,943,641 + MPMX20_02788 0.32 -1.2
2,943,658 + MPMX20_02788 0.34 -0.1
2,943,658 + MPMX20_02788 0.34 -0.3
2,943,675 + MPMX20_02788 0.36 +0.2
2,943,689 + MPMX20_02788 0.38 -0.4
2,943,697 - MPMX20_02788 0.39 +0.7
2,943,699 - MPMX20_02788 0.39 +0.3
2,943,773 + MPMX20_02788 0.47 +5.9
2,943,788 - MPMX20_02788 0.49 +0.7
2,943,822 - MPMX20_02788 0.53 +0.6
2,943,834 + MPMX20_02788 0.54 -0.2
2,943,844 - MPMX20_02788 0.56 -0.9
2,943,867 + MPMX20_02788 0.58 -1.0
2,943,867 + MPMX20_02788 0.58 -2.4
2,943,880 + MPMX20_02788 0.60 -0.2
2,943,918 + MPMX20_02788 0.64 +0.0
2,943,920 + MPMX20_02788 0.64 +0.9
2,943,952 + MPMX20_02788 0.68 +1.3
2,943,960 - MPMX20_02788 0.69 -0.1
2,943,985 + MPMX20_02788 0.72 -0.2
2,943,995 + MPMX20_02788 0.73 +2.0
2,943,995 + MPMX20_02788 0.73 +0.7
2,943,995 + MPMX20_02788 0.73 +0.5
2,943,995 + MPMX20_02788 0.73 +0.7
2,943,995 + MPMX20_02788 0.73 +0.1
2,943,995 + MPMX20_02788 0.73 -0.1
2,943,995 + MPMX20_02788 0.73 +0.4
2,943,998 - MPMX20_02788 0.73 -0.5
2,944,003 - MPMX20_02788 0.74 +0.6
2,944,003 - MPMX20_02788 0.74 +0.1
2,944,003 - MPMX20_02788 0.74 +8.0
2,944,042 + MPMX20_02788 0.78 -0.5
2,944,073 + MPMX20_02788 0.82 +0.9
2,944,073 + MPMX20_02788 0.82 -0.7
2,944,073 + MPMX20_02788 0.82 +0.5
2,944,073 + MPMX20_02788 0.82 -0.5
2,944,073 + MPMX20_02788 0.82 -0.5
2,944,081 - MPMX20_02788 0.83 +0.3
2,944,081 - MPMX20_02788 0.83 +0.1
2,944,081 - MPMX20_02788 0.83 +1.9
2,944,081 - MPMX20_02788 0.83 +0.1
2,944,081 - MPMX20_02788 0.83 -0.5
2,944,192 + -0.9
2,944,256 + +0.9
2,944,267 + +0.6
2,944,275 - -1.2
2,944,313 + -1.3

Or see this region's nucleotide sequence