Experiment: M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02703 and MPMX20_02704 are separated by 27 nucleotides MPMX20_02704 and MPMX20_02705 are separated by 93 nucleotides MPMX20_02705 and MPMX20_02706 are separated by 47 nucleotides MPMX20_02706 and MPMX20_02707 are separated by 124 nucleotides
MPMX20_02703: MPMX20_02703 - Disulfide bond formation protein B, at 2,858,825 to 2,859,355
_02703
MPMX20_02704: MPMX20_02704 - hypothetical protein, at 2,859,383 to 2,859,826
_02704
MPMX20_02705: MPMX20_02705 - putative protein YcgM, at 2,859,920 to 2,860,579
_02705
MPMX20_02706: MPMX20_02706 - Protein YcgL, at 2,860,627 to 2,860,902
_02706
MPMX20_02707: MPMX20_02707 - Septum site-determining protein MinC, at 2,861,027 to 2,861,734
_02707
Position (kb)
2859
2860
2861 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8
9 at 2858.934 kb on + strand, within MPMX20_02703 at 2859.058 kb on + strand, within MPMX20_02703 at 2859.099 kb on + strand, within MPMX20_02703 at 2859.309 kb on + strand at 2859.422 kb on + strand at 2859.524 kb on + strand, within MPMX20_02704 at 2859.531 kb on - strand, within MPMX20_02704 at 2859.552 kb on - strand, within MPMX20_02704 at 2859.579 kb on - strand, within MPMX20_02704 at 2859.833 kb on + strand at 2859.840 kb on + strand at 2859.848 kb on - strand at 2859.857 kb on + strand at 2859.865 kb on - strand at 2859.867 kb on + strand at 2859.996 kb on - strand, within MPMX20_02705 at 2859.997 kb on + strand, within MPMX20_02705 at 2860.023 kb on - strand, within MPMX20_02705 at 2860.052 kb on + strand, within MPMX20_02705 at 2860.126 kb on + strand, within MPMX20_02705 at 2860.134 kb on - strand, within MPMX20_02705 at 2860.134 kb on - strand, within MPMX20_02705 at 2860.134 kb on - strand, within MPMX20_02705 at 2860.134 kb on - strand, within MPMX20_02705 at 2860.136 kb on + strand, within MPMX20_02705 at 2860.145 kb on + strand, within MPMX20_02705 at 2860.153 kb on - strand, within MPMX20_02705 at 2860.153 kb on - strand, within MPMX20_02705 at 2860.220 kb on - strand, within MPMX20_02705 at 2860.237 kb on - strand, within MPMX20_02705 at 2860.270 kb on + strand, within MPMX20_02705 at 2860.270 kb on + strand, within MPMX20_02705 at 2860.321 kb on + strand, within MPMX20_02705 at 2860.347 kb on - strand, within MPMX20_02705 at 2860.442 kb on - strand, within MPMX20_02705 at 2860.463 kb on + strand, within MPMX20_02705 at 2860.476 kb on - strand, within MPMX20_02705 at 2860.476 kb on - strand, within MPMX20_02705 at 2860.483 kb on + strand, within MPMX20_02705 at 2860.495 kb on + strand, within MPMX20_02705 at 2860.495 kb on + strand, within MPMX20_02705 at 2860.495 kb on + strand, within MPMX20_02705 at 2860.503 kb on - strand, within MPMX20_02705 at 2860.505 kb on + strand, within MPMX20_02705 at 2860.505 kb on + strand, within MPMX20_02705 at 2860.505 kb on + strand, within MPMX20_02705 at 2860.505 kb on + strand, within MPMX20_02705 at 2860.505 kb on + strand, within MPMX20_02705 at 2860.505 kb on + strand, within MPMX20_02705 at 2860.505 kb on + strand, within MPMX20_02705 at 2860.513 kb on - strand, within MPMX20_02705 at 2860.513 kb on - strand, within MPMX20_02705 at 2860.513 kb on - strand, within MPMX20_02705 at 2860.513 kb on - strand, within MPMX20_02705 at 2860.523 kb on - strand at 2860.544 kb on - strand at 2860.562 kb on + strand at 2860.562 kb on + strand at 2860.562 kb on + strand at 2860.562 kb on + strand at 2860.570 kb on - strand at 2860.586 kb on + strand at 2860.586 kb on + strand at 2860.586 kb on - strand at 2860.586 kb on - strand at 2860.587 kb on + strand at 2860.588 kb on + strand at 2860.594 kb on + strand at 2860.594 kb on + strand at 2860.594 kb on + strand at 2860.596 kb on + strand at 2860.596 kb on + strand at 2860.596 kb on + strand at 2860.596 kb on + strand at 2860.602 kb on - strand at 2860.652 kb on - strand at 2860.686 kb on + strand, within MPMX20_02706 at 2860.699 kb on + strand, within MPMX20_02706 at 2860.699 kb on + strand, within MPMX20_02706 at 2860.699 kb on + strand, within MPMX20_02706 at 2860.702 kb on - strand, within MPMX20_02706 at 2860.707 kb on - strand, within MPMX20_02706 at 2860.707 kb on - strand, within MPMX20_02706 at 2860.707 kb on - strand, within MPMX20_02706 at 2860.707 kb on - strand, within MPMX20_02706 at 2860.707 kb on - strand, within MPMX20_02706 at 2860.707 kb on - strand, within MPMX20_02706 at 2860.742 kb on - strand, within MPMX20_02706 at 2860.747 kb on - strand, within MPMX20_02706 at 2860.747 kb on - strand, within MPMX20_02706 at 2860.813 kb on + strand, within MPMX20_02706 at 2860.815 kb on + strand, within MPMX20_02706 at 2860.821 kb on - strand, within MPMX20_02706 at 2860.856 kb on + strand, within MPMX20_02706 at 2860.856 kb on + strand, within MPMX20_02706 at 2860.856 kb on + strand, within MPMX20_02706 at 2860.864 kb on - strand, within MPMX20_02706 at 2860.866 kb on + strand, within MPMX20_02706 at 2860.866 kb on + strand, within MPMX20_02706 at 2860.866 kb on + strand, within MPMX20_02706 at 2860.866 kb on + strand, within MPMX20_02706 at 2860.866 kb on + strand, within MPMX20_02706 at 2860.874 kb on - strand, within MPMX20_02706 at 2860.874 kb on - strand, within MPMX20_02706 at 2860.874 kb on - strand, within MPMX20_02706 at 2860.874 kb on - strand, within MPMX20_02706 at 2860.874 kb on - strand, within MPMX20_02706 at 2860.893 kb on - strand at 2860.943 kb on - strand at 2860.943 kb on - strand at 2860.948 kb on - strand at 2860.953 kb on - strand at 2860.960 kb on - strand at 2860.961 kb on + strand at 2860.961 kb on + strand at 2860.969 kb on - strand at 2860.969 kb on - strand at 2860.971 kb on + strand at 2860.976 kb on + strand at 2860.979 kb on - strand at 2860.979 kb on - strand at 2860.992 kb on + strand at 2861.000 kb on - strand at 2861.020 kb on + strand at 2861.020 kb on + strand at 2861.022 kb on - strand at 2861.028 kb on - strand at 2861.028 kb on - strand at 2861.028 kb on - strand at 2861.045 kb on - strand at 2861.055 kb on - strand at 2861.055 kb on - strand at 2861.060 kb on + strand at 2861.060 kb on + strand at 2861.060 kb on + strand at 2861.068 kb on - strand at 2861.068 kb on - strand at 2861.068 kb on - strand at 2861.068 kb on - strand at 2861.068 kb on - strand at 2861.068 kb on - strand at 2861.070 kb on + strand at 2861.075 kb on - strand at 2861.078 kb on - strand at 2861.097 kb on + strand at 2861.186 kb on + strand, within MPMX20_02707 at 2861.186 kb on + strand, within MPMX20_02707 at 2861.504 kb on + strand, within MPMX20_02707
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,858,934 + MPMX20_02703 0.21 -0.5 2,859,058 + MPMX20_02703 0.44 +0.3 2,859,099 + MPMX20_02703 0.52 +0.3 2,859,309 + -0.4 2,859,422 + -3.4 2,859,524 + MPMX20_02704 0.32 +0.3 2,859,531 - MPMX20_02704 0.33 +0.3 2,859,552 - MPMX20_02704 0.38 +1.4 2,859,579 - MPMX20_02704 0.44 -0.5 2,859,833 + -0.7 2,859,840 + -0.0 2,859,848 - +0.2 2,859,857 + -0.8 2,859,865 - +1.0 2,859,867 + -0.9 2,859,996 - MPMX20_02705 0.12 +0.0 2,859,997 + MPMX20_02705 0.12 +0.8 2,860,023 - MPMX20_02705 0.16 +0.2 2,860,052 + MPMX20_02705 0.20 +0.8 2,860,126 + MPMX20_02705 0.31 -1.0 2,860,134 - MPMX20_02705 0.32 +0.3 2,860,134 - MPMX20_02705 0.32 -0.9 2,860,134 - MPMX20_02705 0.32 -0.3 2,860,134 - MPMX20_02705 0.32 +3.6 2,860,136 + MPMX20_02705 0.33 +0.7 2,860,145 + MPMX20_02705 0.34 +1.2 2,860,153 - MPMX20_02705 0.35 +1.5 2,860,153 - MPMX20_02705 0.35 +0.8 2,860,220 - MPMX20_02705 0.45 -0.2 2,860,237 - MPMX20_02705 0.48 +1.1 2,860,270 + MPMX20_02705 0.53 -0.7 2,860,270 + MPMX20_02705 0.53 +5.5 2,860,321 + MPMX20_02705 0.61 -0.5 2,860,347 - MPMX20_02705 0.65 -1.5 2,860,442 - MPMX20_02705 0.79 +1.0 2,860,463 + MPMX20_02705 0.82 -0.5 2,860,476 - MPMX20_02705 0.84 -0.9 2,860,476 - MPMX20_02705 0.84 -0.1 2,860,483 + MPMX20_02705 0.85 -1.6 2,860,495 + MPMX20_02705 0.87 +2.3 2,860,495 + MPMX20_02705 0.87 +0.1 2,860,495 + MPMX20_02705 0.87 +0.8 2,860,503 - MPMX20_02705 0.88 +0.2 2,860,505 + MPMX20_02705 0.89 +0.2 2,860,505 + MPMX20_02705 0.89 -1.8 2,860,505 + MPMX20_02705 0.89 -1.4 2,860,505 + MPMX20_02705 0.89 -0.5 2,860,505 + MPMX20_02705 0.89 +0.3 2,860,505 + MPMX20_02705 0.89 +1.3 2,860,505 + MPMX20_02705 0.89 -0.2 2,860,513 - MPMX20_02705 0.90 +0.3 2,860,513 - MPMX20_02705 0.90 +1.2 2,860,513 - MPMX20_02705 0.90 +1.3 2,860,513 - MPMX20_02705 0.90 +0.7 2,860,523 - +1.0 2,860,544 - +0.7 2,860,562 + -0.4 2,860,562 + -1.7 2,860,562 + +3.2 2,860,562 + -2.4 2,860,570 - +0.2 2,860,586 + +1.3 2,860,586 + -1.2 2,860,586 - -2.2 2,860,586 - +0.0 2,860,587 + -0.3 2,860,588 + +1.1 2,860,594 + +0.2 2,860,594 + +0.0 2,860,594 + +2.2 2,860,596 + -1.5 2,860,596 + -2.5 2,860,596 + +2.7 2,860,596 + +0.0 2,860,602 - +0.5 2,860,652 - -0.3 2,860,686 + MPMX20_02706 0.21 +2.6 2,860,699 + MPMX20_02706 0.26 +1.3 2,860,699 + MPMX20_02706 0.26 +1.3 2,860,699 + MPMX20_02706 0.26 -1.8 2,860,702 - MPMX20_02706 0.27 +1.1 2,860,707 - MPMX20_02706 0.29 -0.7 2,860,707 - MPMX20_02706 0.29 -2.4 2,860,707 - MPMX20_02706 0.29 +0.6 2,860,707 - MPMX20_02706 0.29 -2.0 2,860,707 - MPMX20_02706 0.29 +1.2 2,860,707 - MPMX20_02706 0.29 -1.5 2,860,742 - MPMX20_02706 0.42 -1.6 2,860,747 - MPMX20_02706 0.43 -0.2 2,860,747 - MPMX20_02706 0.43 -1.4 2,860,813 + MPMX20_02706 0.67 +0.1 2,860,815 + MPMX20_02706 0.68 +1.8 2,860,821 - MPMX20_02706 0.70 -0.7 2,860,856 + MPMX20_02706 0.83 +0.3 2,860,856 + MPMX20_02706 0.83 -1.8 2,860,856 + MPMX20_02706 0.83 +3.1 2,860,864 - MPMX20_02706 0.86 -0.6 2,860,866 + MPMX20_02706 0.87 -0.2 2,860,866 + MPMX20_02706 0.87 +0.7 2,860,866 + MPMX20_02706 0.87 -0.9 2,860,866 + MPMX20_02706 0.87 -0.0 2,860,866 + MPMX20_02706 0.87 +0.3 2,860,874 - MPMX20_02706 0.89 +0.3 2,860,874 - MPMX20_02706 0.89 +1.9 2,860,874 - MPMX20_02706 0.89 +0.8 2,860,874 - MPMX20_02706 0.89 +0.2 2,860,874 - MPMX20_02706 0.89 +1.8 2,860,893 - -1.2 2,860,943 - -0.6 2,860,943 - +0.5 2,860,948 - -0.1 2,860,953 - +1.0 2,860,960 - -1.9 2,860,961 + +0.8 2,860,961 + +2.3 2,860,969 - -2.1 2,860,969 - +0.9 2,860,971 + -2.0 2,860,976 + +0.9 2,860,979 - +0.1 2,860,979 - +0.3 2,860,992 + -0.7 2,861,000 - +0.0 2,861,020 + -1.2 2,861,020 + -0.7 2,861,022 - +1.6 2,861,028 - +1.7 2,861,028 - +2.3 2,861,028 - -0.4 2,861,045 - +0.8 2,861,055 - +1.3 2,861,055 - +2.3 2,861,060 + +2.3 2,861,060 + +0.8 2,861,060 + -0.2 2,861,068 - +1.3 2,861,068 - +1.0 2,861,068 - +0.2 2,861,068 - +0.0 2,861,068 - +1.6 2,861,068 - -0.1 2,861,070 + +8.9 2,861,075 - +2.1 2,861,078 - +0.8 2,861,097 + +3.3 2,861,186 + MPMX20_02707 0.22 +0.9 2,861,186 + MPMX20_02707 0.22 +0.4 2,861,504 + MPMX20_02707 0.67 -2.4
Or see this region's nucleotide sequence