Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04376

Experiment: 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04373 and MPMX20_04374 overlap by 44 nucleotidesMPMX20_04374 and MPMX20_04375 overlap by 4 nucleotidesMPMX20_04375 and MPMX20_04376 overlap by 4 nucleotidesMPMX20_04376 and MPMX20_04377 overlap by 4 nucleotidesMPMX20_04377 and MPMX20_04378 overlap by 4 nucleotides MPMX20_04373: MPMX20_04373 - hypothetical protein, at 4,564,394 to 4,564,987 _04373 MPMX20_04374: MPMX20_04374 - putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF, at 4,564,944 to 4,565,348 _04374 MPMX20_04375: MPMX20_04375 - putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 4,565,345 to 4,565,683 _04375 MPMX20_04376: MPMX20_04376 - Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase, at 4,565,680 to 4,567,335 _04376 MPMX20_04377: MPMX20_04377 - putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, at 4,567,332 to 4,568,234 _04377 MPMX20_04378: MPMX20_04378 - Bifunctional polymyxin resistance protein ArnA, at 4,568,231 to 4,570,213 _04378 Position (kb) 4565 4566 4567 4568Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4564.699 kb on - strand, within MPMX20_04373at 4564.711 kb on + strand, within MPMX20_04373at 4564.753 kb on - strand, within MPMX20_04373at 4564.815 kb on + strand, within MPMX20_04373at 4564.911 kb on + strand, within MPMX20_04373at 4564.911 kb on + strand, within MPMX20_04373at 4564.926 kb on + strand, within MPMX20_04373at 4564.934 kb on + strandat 4564.934 kb on - strandat 4564.935 kb on + strandat 4564.942 kb on - strandat 4565.080 kb on + strand, within MPMX20_04374at 4565.112 kb on + strand, within MPMX20_04374at 4565.112 kb on + strand, within MPMX20_04374at 4565.120 kb on - strand, within MPMX20_04374at 4565.127 kb on - strand, within MPMX20_04374at 4565.139 kb on + strand, within MPMX20_04374at 4565.278 kb on + strand, within MPMX20_04374at 4565.312 kb on + strandat 4565.312 kb on + strandat 4565.315 kb on - strandat 4565.320 kb on - strandat 4565.320 kb on - strandat 4565.322 kb on + strandat 4565.330 kb on - strandat 4565.350 kb on + strandat 4565.357 kb on + strandat 4565.426 kb on + strand, within MPMX20_04375at 4565.454 kb on - strand, within MPMX20_04375at 4565.473 kb on + strand, within MPMX20_04375at 4565.476 kb on - strand, within MPMX20_04375at 4565.481 kb on - strand, within MPMX20_04375at 4565.496 kb on + strand, within MPMX20_04375at 4565.504 kb on - strand, within MPMX20_04375at 4565.506 kb on + strand, within MPMX20_04375at 4565.545 kb on - strand, within MPMX20_04375at 4565.551 kb on + strand, within MPMX20_04375at 4565.575 kb on - strand, within MPMX20_04375at 4565.577 kb on - strand, within MPMX20_04375at 4565.607 kb on + strand, within MPMX20_04375at 4565.617 kb on + strand, within MPMX20_04375at 4565.627 kb on + strand, within MPMX20_04375at 4565.627 kb on + strand, within MPMX20_04375at 4565.632 kb on + strand, within MPMX20_04375at 4565.635 kb on - strand, within MPMX20_04375at 4565.640 kb on - strand, within MPMX20_04375at 4565.640 kb on - strand, within MPMX20_04375at 4565.642 kb on + strand, within MPMX20_04375at 4565.642 kb on + strand, within MPMX20_04375at 4565.659 kb on + strandat 4565.675 kb on + strandat 4565.677 kb on - strandat 4565.690 kb on + strandat 4565.704 kb on + strandat 4565.704 kb on + strandat 4565.713 kb on + strandat 4565.739 kb on - strandat 4565.739 kb on - strandat 4565.813 kb on + strandat 4565.827 kb on - strandat 4565.892 kb on + strand, within MPMX20_04376at 4565.936 kb on + strand, within MPMX20_04376at 4565.945 kb on + strand, within MPMX20_04376at 4565.984 kb on - strand, within MPMX20_04376at 4565.989 kb on + strand, within MPMX20_04376at 4565.997 kb on - strand, within MPMX20_04376at 4566.019 kb on - strand, within MPMX20_04376at 4566.041 kb on - strand, within MPMX20_04376at 4566.041 kb on - strand, within MPMX20_04376at 4566.052 kb on - strand, within MPMX20_04376at 4566.100 kb on - strand, within MPMX20_04376at 4566.169 kb on + strand, within MPMX20_04376at 4566.169 kb on + strand, within MPMX20_04376at 4566.169 kb on + strand, within MPMX20_04376at 4566.177 kb on - strand, within MPMX20_04376at 4566.179 kb on + strand, within MPMX20_04376at 4566.188 kb on + strand, within MPMX20_04376at 4566.206 kb on - strand, within MPMX20_04376at 4566.217 kb on - strand, within MPMX20_04376at 4566.240 kb on - strand, within MPMX20_04376at 4566.311 kb on + strand, within MPMX20_04376at 4566.312 kb on - strand, within MPMX20_04376at 4566.320 kb on + strand, within MPMX20_04376at 4566.356 kb on + strand, within MPMX20_04376at 4566.377 kb on - strand, within MPMX20_04376at 4566.384 kb on + strand, within MPMX20_04376at 4566.385 kb on + strand, within MPMX20_04376at 4566.392 kb on - strand, within MPMX20_04376at 4566.584 kb on + strand, within MPMX20_04376at 4566.592 kb on - strand, within MPMX20_04376at 4566.597 kb on - strand, within MPMX20_04376at 4566.597 kb on - strand, within MPMX20_04376at 4566.656 kb on + strand, within MPMX20_04376at 4566.662 kb on - strand, within MPMX20_04376at 4566.664 kb on - strand, within MPMX20_04376at 4566.668 kb on + strand, within MPMX20_04376at 4566.668 kb on + strand, within MPMX20_04376at 4566.681 kb on - strand, within MPMX20_04376at 4566.694 kb on + strand, within MPMX20_04376at 4566.726 kb on + strand, within MPMX20_04376at 4566.818 kb on - strand, within MPMX20_04376at 4566.827 kb on + strand, within MPMX20_04376at 4566.835 kb on - strand, within MPMX20_04376at 4566.835 kb on - strand, within MPMX20_04376at 4566.893 kb on - strand, within MPMX20_04376at 4566.918 kb on + strand, within MPMX20_04376at 4566.921 kb on - strand, within MPMX20_04376at 4566.955 kb on - strand, within MPMX20_04376at 4566.980 kb on - strand, within MPMX20_04376at 4566.989 kb on - strand, within MPMX20_04376at 4567.072 kb on - strand, within MPMX20_04376at 4567.097 kb on - strand, within MPMX20_04376at 4567.168 kb on - strand, within MPMX20_04376at 4567.297 kb on - strandat 4567.297 kb on - strandat 4567.297 kb on - strandat 4567.297 kb on - strandat 4567.308 kb on + strandat 4567.336 kb on - strandat 4567.480 kb on + strand, within MPMX20_04377at 4567.483 kb on + strand, within MPMX20_04377at 4567.485 kb on + strand, within MPMX20_04377at 4567.522 kb on - strand, within MPMX20_04377at 4567.529 kb on - strand, within MPMX20_04377at 4567.543 kb on + strand, within MPMX20_04377at 4567.543 kb on + strand, within MPMX20_04377at 4567.543 kb on + strand, within MPMX20_04377at 4567.543 kb on + strand, within MPMX20_04377at 4567.551 kb on - strand, within MPMX20_04377at 4567.551 kb on - strand, within MPMX20_04377at 4567.551 kb on - strand, within MPMX20_04377at 4567.551 kb on - strand, within MPMX20_04377at 4567.551 kb on - strand, within MPMX20_04377at 4567.553 kb on + strand, within MPMX20_04377at 4567.578 kb on + strand, within MPMX20_04377at 4567.578 kb on + strand, within MPMX20_04377at 4567.586 kb on - strand, within MPMX20_04377at 4567.586 kb on - strand, within MPMX20_04377at 4567.606 kb on + strand, within MPMX20_04377at 4567.614 kb on - strand, within MPMX20_04377at 4567.805 kb on - strand, within MPMX20_04377at 4567.863 kb on + strand, within MPMX20_04377at 4567.868 kb on + strand, within MPMX20_04377at 4567.885 kb on + strand, within MPMX20_04377at 4567.930 kb on - strand, within MPMX20_04377at 4567.948 kb on - strand, within MPMX20_04377at 4568.030 kb on - strand, within MPMX20_04377at 4568.036 kb on - strand, within MPMX20_04377at 4568.104 kb on - strand, within MPMX20_04377at 4568.106 kb on + strand, within MPMX20_04377at 4568.119 kb on - strand, within MPMX20_04377at 4568.186 kb on - strandat 4568.191 kb on + strandat 4568.191 kb on + strandat 4568.200 kb on - strandat 4568.235 kb on - strandat 4568.251 kb on + strandat 4568.259 kb on - strandat 4568.259 kb on - strandat 4568.259 kb on - strandat 4568.316 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,564,699 - MPMX20_04373 0.51 -0.8
4,564,711 + MPMX20_04373 0.53 -0.4
4,564,753 - MPMX20_04373 0.60 +1.7
4,564,815 + MPMX20_04373 0.71 +2.5
4,564,911 + MPMX20_04373 0.87 +1.2
4,564,911 + MPMX20_04373 0.87 -0.7
4,564,926 + MPMX20_04373 0.90 +1.7
4,564,934 + -2.2
4,564,934 - -0.0
4,564,935 + +1.7
4,564,942 - -0.0
4,565,080 + MPMX20_04374 0.34 -3.6
4,565,112 + MPMX20_04374 0.41 -3.6
4,565,112 + MPMX20_04374 0.41 -2.4
4,565,120 - MPMX20_04374 0.43 -3.3
4,565,127 - MPMX20_04374 0.45 -3.6
4,565,139 + MPMX20_04374 0.48 -2.4
4,565,278 + MPMX20_04374 0.82 -2.9
4,565,312 + -2.8
4,565,312 + +0.4
4,565,315 - -1.4
4,565,320 - -2.9
4,565,320 - -1.9
4,565,322 + -1.7
4,565,330 - -2.4
4,565,350 + -0.5
4,565,357 + +0.6
4,565,426 + MPMX20_04375 0.24 -3.0
4,565,454 - MPMX20_04375 0.32 -0.2
4,565,473 + MPMX20_04375 0.38 -1.9
4,565,476 - MPMX20_04375 0.39 -3.0
4,565,481 - MPMX20_04375 0.40 -2.8
4,565,496 + MPMX20_04375 0.45 +1.0
4,565,504 - MPMX20_04375 0.47 -2.2
4,565,506 + MPMX20_04375 0.47 -2.0
4,565,545 - MPMX20_04375 0.59 -2.9
4,565,551 + MPMX20_04375 0.61 -2.4
4,565,575 - MPMX20_04375 0.68 -2.7
4,565,577 - MPMX20_04375 0.68 -1.5
4,565,607 + MPMX20_04375 0.77 -2.2
4,565,617 + MPMX20_04375 0.80 -3.6
4,565,627 + MPMX20_04375 0.83 +0.2
4,565,627 + MPMX20_04375 0.83 -1.0
4,565,632 + MPMX20_04375 0.85 -4.2
4,565,635 - MPMX20_04375 0.86 -1.9
4,565,640 - MPMX20_04375 0.87 -0.9
4,565,640 - MPMX20_04375 0.87 -1.6
4,565,642 + MPMX20_04375 0.88 -2.3
4,565,642 + MPMX20_04375 0.88 -3.5
4,565,659 + -1.3
4,565,675 + -0.3
4,565,677 - -2.5
4,565,690 + -0.4
4,565,704 + -1.3
4,565,704 + -2.0
4,565,713 + -0.0
4,565,739 - +1.6
4,565,739 - +0.0
4,565,813 + -0.2
4,565,827 - -0.7
4,565,892 + MPMX20_04376 0.13 -0.7
4,565,936 + MPMX20_04376 0.15 -2.0
4,565,945 + MPMX20_04376 0.16 -0.6
4,565,984 - MPMX20_04376 0.18 -2.0
4,565,989 + MPMX20_04376 0.19 -0.6
4,565,997 - MPMX20_04376 0.19 -1.7
4,566,019 - MPMX20_04376 0.20 -2.5
4,566,041 - MPMX20_04376 0.22 -0.8
4,566,041 - MPMX20_04376 0.22 -2.3
4,566,052 - MPMX20_04376 0.22 -1.9
4,566,100 - MPMX20_04376 0.25 +0.7
4,566,169 + MPMX20_04376 0.30 -1.1
4,566,169 + MPMX20_04376 0.30 -1.3
4,566,169 + MPMX20_04376 0.30 -0.6
4,566,177 - MPMX20_04376 0.30 -0.0
4,566,179 + MPMX20_04376 0.30 +1.7
4,566,188 + MPMX20_04376 0.31 -0.0
4,566,206 - MPMX20_04376 0.32 -0.8
4,566,217 - MPMX20_04376 0.32 -2.0
4,566,240 - MPMX20_04376 0.34 +1.6
4,566,311 + MPMX20_04376 0.38 -0.1
4,566,312 - MPMX20_04376 0.38 -1.7
4,566,320 + MPMX20_04376 0.39 +0.5
4,566,356 + MPMX20_04376 0.41 -1.0
4,566,377 - MPMX20_04376 0.42 -1.6
4,566,384 + MPMX20_04376 0.43 +0.3
4,566,385 + MPMX20_04376 0.43 -1.7
4,566,392 - MPMX20_04376 0.43 +1.0
4,566,584 + MPMX20_04376 0.55 -0.8
4,566,592 - MPMX20_04376 0.55 +0.5
4,566,597 - MPMX20_04376 0.55 +0.4
4,566,597 - MPMX20_04376 0.55 -0.6
4,566,656 + MPMX20_04376 0.59 +0.4
4,566,662 - MPMX20_04376 0.59 -0.2
4,566,664 - MPMX20_04376 0.59 -0.9
4,566,668 + MPMX20_04376 0.60 -0.1
4,566,668 + MPMX20_04376 0.60 -1.3
4,566,681 - MPMX20_04376 0.60 -0.8
4,566,694 + MPMX20_04376 0.61 +3.5
4,566,726 + MPMX20_04376 0.63 -2.5
4,566,818 - MPMX20_04376 0.69 -0.2
4,566,827 + MPMX20_04376 0.69 -4.2
4,566,835 - MPMX20_04376 0.70 -0.8
4,566,835 - MPMX20_04376 0.70 -1.2
4,566,893 - MPMX20_04376 0.73 -0.9
4,566,918 + MPMX20_04376 0.75 -1.7
4,566,921 - MPMX20_04376 0.75 -1.5
4,566,955 - MPMX20_04376 0.77 +0.4
4,566,980 - MPMX20_04376 0.79 -1.3
4,566,989 - MPMX20_04376 0.79 -0.3
4,567,072 - MPMX20_04376 0.84 -1.3
4,567,097 - MPMX20_04376 0.86 -3.0
4,567,168 - MPMX20_04376 0.90 -0.0
4,567,297 - -1.1
4,567,297 - +0.5
4,567,297 - +0.2
4,567,297 - +0.1
4,567,308 + +0.2
4,567,336 - -0.4
4,567,480 + MPMX20_04377 0.16 -3.4
4,567,483 + MPMX20_04377 0.17 -1.8
4,567,485 + MPMX20_04377 0.17 -2.8
4,567,522 - MPMX20_04377 0.21 -1.2
4,567,529 - MPMX20_04377 0.22 -2.9
4,567,543 + MPMX20_04377 0.23 -1.6
4,567,543 + MPMX20_04377 0.23 -2.1
4,567,543 + MPMX20_04377 0.23 -0.7
4,567,543 + MPMX20_04377 0.23 -0.8
4,567,551 - MPMX20_04377 0.24 -0.7
4,567,551 - MPMX20_04377 0.24 -1.8
4,567,551 - MPMX20_04377 0.24 -3.5
4,567,551 - MPMX20_04377 0.24 -1.8
4,567,551 - MPMX20_04377 0.24 -1.5
4,567,553 + MPMX20_04377 0.24 -1.5
4,567,578 + MPMX20_04377 0.27 -3.6
4,567,578 + MPMX20_04377 0.27 -2.8
4,567,586 - MPMX20_04377 0.28 -1.1
4,567,586 - MPMX20_04377 0.28 -2.7
4,567,606 + MPMX20_04377 0.30 -3.1
4,567,614 - MPMX20_04377 0.31 -2.6
4,567,805 - MPMX20_04377 0.52 -0.7
4,567,863 + MPMX20_04377 0.59 -1.7
4,567,868 + MPMX20_04377 0.59 -1.0
4,567,885 + MPMX20_04377 0.61 -2.9
4,567,930 - MPMX20_04377 0.66 -2.3
4,567,948 - MPMX20_04377 0.68 -3.9
4,568,030 - MPMX20_04377 0.77 -0.6
4,568,036 - MPMX20_04377 0.78 -1.4
4,568,104 - MPMX20_04377 0.85 -0.1
4,568,106 + MPMX20_04377 0.86 -2.0
4,568,119 - MPMX20_04377 0.87 -3.8
4,568,186 - -0.9
4,568,191 + -0.3
4,568,191 + -1.1
4,568,200 - -1.3
4,568,235 - +0.5
4,568,251 + -2.0
4,568,259 - +0.3
4,568,259 - -1.0
4,568,259 - -1.1
4,568,316 + -2.5

Or see this region's nucleotide sequence