Experiment: 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03814 and MPMX20_03815 are separated by 61 nucleotides MPMX20_03815 and MPMX20_03816 are separated by 56 nucleotides MPMX20_03816 and MPMX20_03817 overlap by 1 nucleotides MPMX20_03817 and MPMX20_03818 are separated by 144 nucleotides
MPMX20_03814: MPMX20_03814 - hypothetical protein, at 4,017,878 to 4,018,240
_03814
MPMX20_03815: MPMX20_03815 - hypothetical protein, at 4,018,302 to 4,019,018
_03815
MPMX20_03816: MPMX20_03816 - hypothetical protein, at 4,019,075 to 4,019,401
_03816
MPMX20_03817: MPMX20_03817 - tRNA (guanine-N(7)-)-methyltransferase, at 4,019,401 to 4,020,120
_03817
MPMX20_03818: MPMX20_03818 - Adenine DNA glycosylase, at 4,020,265 to 4,021,317
_03818
Position (kb)
4019
4020 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 4018.110 kb on + strand, within MPMX20_03814 at 4018.112 kb on - strand, within MPMX20_03814 at 4018.217 kb on + strand at 4018.217 kb on + strand at 4018.224 kb on - strand at 4018.225 kb on - strand at 4018.247 kb on - strand at 4018.256 kb on + strand at 4018.279 kb on - strand at 4018.279 kb on - strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.283 kb on + strand at 4018.285 kb on + strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.291 kb on - strand at 4018.292 kb on - strand at 4018.312 kb on + strand at 4018.434 kb on + strand, within MPMX20_03815 at 4018.434 kb on + strand, within MPMX20_03815 at 4018.443 kb on + strand, within MPMX20_03815 at 4018.482 kb on - strand, within MPMX20_03815 at 4018.486 kb on + strand, within MPMX20_03815 at 4018.494 kb on - strand, within MPMX20_03815 at 4018.502 kb on + strand, within MPMX20_03815 at 4018.502 kb on + strand, within MPMX20_03815 at 4018.569 kb on - strand, within MPMX20_03815 at 4018.573 kb on - strand, within MPMX20_03815 at 4018.648 kb on + strand, within MPMX20_03815 at 4018.654 kb on + strand, within MPMX20_03815 at 4018.694 kb on + strand, within MPMX20_03815 at 4018.751 kb on - strand, within MPMX20_03815 at 4018.756 kb on - strand, within MPMX20_03815 at 4018.770 kb on - strand, within MPMX20_03815 at 4018.825 kb on - strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.894 kb on + strand, within MPMX20_03815 at 4018.902 kb on - strand, within MPMX20_03815 at 4018.902 kb on - strand, within MPMX20_03815 at 4018.959 kb on - strand at 4018.959 kb on - strand at 4019.048 kb on + strand at 4019.056 kb on - strand at 4019.190 kb on + strand, within MPMX20_03816 at 4019.193 kb on - strand, within MPMX20_03816 at 4019.195 kb on + strand, within MPMX20_03816 at 4019.195 kb on + strand, within MPMX20_03816 at 4019.202 kb on - strand, within MPMX20_03816 at 4019.203 kb on - strand, within MPMX20_03816 at 4019.203 kb on - strand, within MPMX20_03816 at 4019.203 kb on - strand, within MPMX20_03816 at 4019.274 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.293 kb on + strand, within MPMX20_03816 at 4019.301 kb on - strand, within MPMX20_03816 at 4019.301 kb on - strand, within MPMX20_03816 at 4019.301 kb on - strand, within MPMX20_03816 at 4019.301 kb on - strand, within MPMX20_03816 at 4019.301 kb on - strand, within MPMX20_03816 at 4019.301 kb on - strand, within MPMX20_03816 at 4019.385 kb on - strand at 4019.419 kb on + strand at 4019.496 kb on + strand, within MPMX20_03817 at 4019.504 kb on - strand, within MPMX20_03817 at 4019.573 kb on + strand, within MPMX20_03817 at 4019.582 kb on - strand, within MPMX20_03817 at 4019.621 kb on + strand, within MPMX20_03817 at 4019.629 kb on - strand, within MPMX20_03817 at 4019.701 kb on + strand, within MPMX20_03817 at 4019.756 kb on - strand, within MPMX20_03817 at 4019.756 kb on - strand, within MPMX20_03817 at 4019.761 kb on + strand, within MPMX20_03817 at 4019.799 kb on - strand, within MPMX20_03817 at 4019.820 kb on - strand, within MPMX20_03817 at 4019.831 kb on - strand, within MPMX20_03817 at 4019.838 kb on + strand, within MPMX20_03817 at 4019.838 kb on + strand, within MPMX20_03817 at 4019.841 kb on - strand, within MPMX20_03817 at 4019.841 kb on - strand, within MPMX20_03817 at 4019.846 kb on - strand, within MPMX20_03817 at 4019.846 kb on - strand, within MPMX20_03817 at 4019.846 kb on - strand, within MPMX20_03817 at 4019.846 kb on - strand, within MPMX20_03817 at 4019.862 kb on - strand, within MPMX20_03817 at 4019.956 kb on + strand, within MPMX20_03817 at 4019.963 kb on - strand, within MPMX20_03817 at 4019.964 kb on - strand, within MPMX20_03817 at 4019.984 kb on - strand, within MPMX20_03817 at 4020.063 kb on - strand at 4020.186 kb on - strand at 4020.207 kb on - strand at 4020.223 kb on - strand at 4020.225 kb on + strand at 4020.292 kb on + strand at 4020.292 kb on + strand at 4020.292 kb on + strand at 4020.300 kb on - strand at 4020.325 kb on + strand at 4020.369 kb on - strand at 4020.369 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,018,110 + MPMX20_03814 0.64 +0.7 4,018,112 - MPMX20_03814 0.64 -1.8 4,018,217 + -1.1 4,018,217 + -0.5 4,018,224 - -0.8 4,018,225 - -0.3 4,018,247 - -2.1 4,018,256 + -1.1 4,018,279 - -3.7 4,018,279 - +0.4 4,018,283 + +0.3 4,018,283 + -2.5 4,018,283 + -0.4 4,018,283 + -0.3 4,018,283 + +1.0 4,018,283 + -1.4 4,018,283 + -0.7 4,018,283 + -2.3 4,018,283 + -1.0 4,018,285 + +0.2 4,018,291 - -0.5 4,018,291 - +0.6 4,018,291 - -2.1 4,018,291 - +0.7 4,018,291 - -0.9 4,018,291 - -0.7 4,018,292 - -1.4 4,018,312 + +0.4 4,018,434 + MPMX20_03815 0.18 -0.2 4,018,434 + MPMX20_03815 0.18 -0.1 4,018,443 + MPMX20_03815 0.20 -0.3 4,018,482 - MPMX20_03815 0.25 -0.5 4,018,486 + MPMX20_03815 0.26 -0.7 4,018,494 - MPMX20_03815 0.27 +1.0 4,018,502 + MPMX20_03815 0.28 +4.8 4,018,502 + MPMX20_03815 0.28 +0.3 4,018,569 - MPMX20_03815 0.37 -1.6 4,018,573 - MPMX20_03815 0.38 -0.3 4,018,648 + MPMX20_03815 0.48 +0.7 4,018,654 + MPMX20_03815 0.49 +0.3 4,018,694 + MPMX20_03815 0.55 +2.0 4,018,751 - MPMX20_03815 0.63 -1.6 4,018,756 - MPMX20_03815 0.63 -0.5 4,018,770 - MPMX20_03815 0.65 +2.0 4,018,825 - MPMX20_03815 0.73 +2.0 4,018,894 + MPMX20_03815 0.83 -1.3 4,018,894 + MPMX20_03815 0.83 -0.2 4,018,894 + MPMX20_03815 0.83 +0.4 4,018,894 + MPMX20_03815 0.83 +0.2 4,018,894 + MPMX20_03815 0.83 -1.1 4,018,894 + MPMX20_03815 0.83 -1.4 4,018,894 + MPMX20_03815 0.83 +1.0 4,018,894 + MPMX20_03815 0.83 -1.1 4,018,902 - MPMX20_03815 0.84 +0.8 4,018,902 - MPMX20_03815 0.84 -0.2 4,018,959 - +0.1 4,018,959 - -0.6 4,019,048 + +0.2 4,019,056 - -3.5 4,019,190 + MPMX20_03816 0.35 -1.9 4,019,193 - MPMX20_03816 0.36 +2.7 4,019,195 + MPMX20_03816 0.37 -0.8 4,019,195 + MPMX20_03816 0.37 -0.6 4,019,202 - MPMX20_03816 0.39 -2.6 4,019,203 - MPMX20_03816 0.39 -1.0 4,019,203 - MPMX20_03816 0.39 -0.8 4,019,203 - MPMX20_03816 0.39 -1.2 4,019,274 + MPMX20_03816 0.61 +0.5 4,019,293 + MPMX20_03816 0.67 -2.4 4,019,293 + MPMX20_03816 0.67 -0.8 4,019,293 + MPMX20_03816 0.67 -0.1 4,019,293 + MPMX20_03816 0.67 -0.4 4,019,293 + MPMX20_03816 0.67 +1.0 4,019,293 + MPMX20_03816 0.67 -0.8 4,019,293 + MPMX20_03816 0.67 -0.6 4,019,293 + MPMX20_03816 0.67 -0.0 4,019,293 + MPMX20_03816 0.67 +1.4 4,019,293 + MPMX20_03816 0.67 +0.2 4,019,293 + MPMX20_03816 0.67 +0.8 4,019,301 - MPMX20_03816 0.69 -0.7 4,019,301 - MPMX20_03816 0.69 +0.7 4,019,301 - MPMX20_03816 0.69 +0.1 4,019,301 - MPMX20_03816 0.69 +1.6 4,019,301 - MPMX20_03816 0.69 +1.1 4,019,301 - MPMX20_03816 0.69 -1.7 4,019,385 - +1.0 4,019,419 + -0.2 4,019,496 + MPMX20_03817 0.13 -0.7 4,019,504 - MPMX20_03817 0.14 +1.4 4,019,573 + MPMX20_03817 0.24 +0.4 4,019,582 - MPMX20_03817 0.25 +2.6 4,019,621 + MPMX20_03817 0.31 -0.0 4,019,629 - MPMX20_03817 0.32 -0.7 4,019,701 + MPMX20_03817 0.42 -1.0 4,019,756 - MPMX20_03817 0.49 +1.0 4,019,756 - MPMX20_03817 0.49 +0.2 4,019,761 + MPMX20_03817 0.50 -0.2 4,019,799 - MPMX20_03817 0.55 +1.0 4,019,820 - MPMX20_03817 0.58 -0.2 4,019,831 - MPMX20_03817 0.60 +0.8 4,019,838 + MPMX20_03817 0.61 -0.6 4,019,838 + MPMX20_03817 0.61 +0.3 4,019,841 - MPMX20_03817 0.61 +0.6 4,019,841 - MPMX20_03817 0.61 +0.7 4,019,846 - MPMX20_03817 0.62 +0.9 4,019,846 - MPMX20_03817 0.62 -0.2 4,019,846 - MPMX20_03817 0.62 +1.6 4,019,846 - MPMX20_03817 0.62 +0.2 4,019,862 - MPMX20_03817 0.64 -1.2 4,019,956 + MPMX20_03817 0.77 +0.4 4,019,963 - MPMX20_03817 0.78 -1.1 4,019,964 - MPMX20_03817 0.78 -0.6 4,019,984 - MPMX20_03817 0.81 +1.0 4,020,063 - -0.4 4,020,186 - +0.4 4,020,207 - +2.0 4,020,223 - +0.7 4,020,225 + +0.4 4,020,292 + -0.4 4,020,292 + +0.4 4,020,292 + -0.1 4,020,300 - -0.8 4,020,325 + -0.8 4,020,369 - -1.6 4,020,369 - +2.8
Or see this region's nucleotide sequence