Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03657

Experiment: 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03656 and MPMX20_03657 are separated by 77 nucleotidesMPMX20_03657 and MPMX20_03658 are separated by 15 nucleotides MPMX20_03656: MPMX20_03656 - Glycerate 2-kinase, at 3,849,755 to 3,850,900 _03656 MPMX20_03657: MPMX20_03657 - Glucarate dehydratase, at 3,850,978 to 3,852,315 _03657 MPMX20_03658: MPMX20_03658 - Glucarate dehydratase-related protein, at 3,852,331 to 3,853,671 _03658 Position (kb) 3850 3851 3852 3853Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3850.106 kb on + strand, within MPMX20_03656at 3850.132 kb on + strand, within MPMX20_03656at 3850.133 kb on - strand, within MPMX20_03656at 3850.133 kb on - strand, within MPMX20_03656at 3850.145 kb on + strand, within MPMX20_03656at 3850.200 kb on + strand, within MPMX20_03656at 3850.206 kb on + strand, within MPMX20_03656at 3850.240 kb on - strand, within MPMX20_03656at 3850.240 kb on - strand, within MPMX20_03656at 3850.282 kb on - strand, within MPMX20_03656at 3850.307 kb on + strand, within MPMX20_03656at 3850.312 kb on + strand, within MPMX20_03656at 3850.320 kb on - strand, within MPMX20_03656at 3850.321 kb on + strand, within MPMX20_03656at 3850.329 kb on - strand, within MPMX20_03656at 3850.356 kb on + strand, within MPMX20_03656at 3850.356 kb on + strand, within MPMX20_03656at 3850.356 kb on + strand, within MPMX20_03656at 3850.375 kb on + strand, within MPMX20_03656at 3850.375 kb on + strand, within MPMX20_03656at 3850.375 kb on + strand, within MPMX20_03656at 3850.388 kb on - strand, within MPMX20_03656at 3850.393 kb on - strand, within MPMX20_03656at 3850.412 kb on - strand, within MPMX20_03656at 3850.414 kb on + strand, within MPMX20_03656at 3850.414 kb on + strand, within MPMX20_03656at 3850.414 kb on + strand, within MPMX20_03656at 3850.422 kb on - strand, within MPMX20_03656at 3850.422 kb on - strand, within MPMX20_03656at 3850.444 kb on + strand, within MPMX20_03656at 3850.454 kb on - strand, within MPMX20_03656at 3850.527 kb on - strand, within MPMX20_03656at 3850.564 kb on + strand, within MPMX20_03656at 3850.572 kb on - strand, within MPMX20_03656at 3850.609 kb on + strand, within MPMX20_03656at 3850.609 kb on + strand, within MPMX20_03656at 3850.617 kb on - strand, within MPMX20_03656at 3850.617 kb on - strand, within MPMX20_03656at 3850.617 kb on - strand, within MPMX20_03656at 3850.617 kb on - strand, within MPMX20_03656at 3850.649 kb on + strand, within MPMX20_03656at 3850.651 kb on + strand, within MPMX20_03656at 3850.708 kb on - strand, within MPMX20_03656at 3850.720 kb on - strand, within MPMX20_03656at 3850.742 kb on + strand, within MPMX20_03656at 3850.770 kb on - strand, within MPMX20_03656at 3850.869 kb on - strandat 3850.915 kb on - strandat 3850.927 kb on - strandat 3850.927 kb on - strandat 3850.931 kb on + strandat 3850.931 kb on + strandat 3850.939 kb on - strandat 3850.939 kb on - strandat 3850.940 kb on - strandat 3851.021 kb on + strandat 3851.105 kb on + strandat 3851.105 kb on + strandat 3851.127 kb on + strand, within MPMX20_03657at 3851.138 kb on + strand, within MPMX20_03657at 3851.146 kb on - strand, within MPMX20_03657at 3851.218 kb on + strand, within MPMX20_03657at 3851.244 kb on + strand, within MPMX20_03657at 3851.252 kb on - strand, within MPMX20_03657at 3851.309 kb on + strand, within MPMX20_03657at 3851.309 kb on + strand, within MPMX20_03657at 3851.317 kb on - strand, within MPMX20_03657at 3851.322 kb on - strand, within MPMX20_03657at 3851.335 kb on + strand, within MPMX20_03657at 3851.335 kb on + strand, within MPMX20_03657at 3851.343 kb on - strand, within MPMX20_03657at 3851.343 kb on - strand, within MPMX20_03657at 3851.350 kb on + strand, within MPMX20_03657at 3851.356 kb on + strand, within MPMX20_03657at 3851.356 kb on + strand, within MPMX20_03657at 3851.364 kb on - strand, within MPMX20_03657at 3851.364 kb on - strand, within MPMX20_03657at 3851.374 kb on - strand, within MPMX20_03657at 3851.374 kb on - strand, within MPMX20_03657at 3851.404 kb on + strand, within MPMX20_03657at 3851.424 kb on - strand, within MPMX20_03657at 3851.424 kb on - strand, within MPMX20_03657at 3851.464 kb on + strand, within MPMX20_03657at 3851.520 kb on + strand, within MPMX20_03657at 3851.520 kb on + strand, within MPMX20_03657at 3851.528 kb on - strand, within MPMX20_03657at 3851.528 kb on - strand, within MPMX20_03657at 3851.593 kb on - strand, within MPMX20_03657at 3851.606 kb on + strand, within MPMX20_03657at 3851.703 kb on + strand, within MPMX20_03657at 3851.703 kb on + strand, within MPMX20_03657at 3851.738 kb on + strand, within MPMX20_03657at 3851.760 kb on + strand, within MPMX20_03657at 3851.904 kb on - strand, within MPMX20_03657at 3851.932 kb on + strand, within MPMX20_03657at 3851.956 kb on - strand, within MPMX20_03657at 3851.993 kb on - strand, within MPMX20_03657at 3852.003 kb on + strand, within MPMX20_03657at 3852.062 kb on + strand, within MPMX20_03657at 3852.062 kb on + strand, within MPMX20_03657at 3852.070 kb on - strand, within MPMX20_03657at 3852.114 kb on - strand, within MPMX20_03657at 3852.154 kb on + strand, within MPMX20_03657at 3852.182 kb on - strandat 3852.230 kb on + strandat 3852.279 kb on + strandat 3852.308 kb on + strandat 3852.340 kb on + strandat 3852.471 kb on + strand, within MPMX20_03658at 3852.483 kb on + strand, within MPMX20_03658at 3852.595 kb on + strand, within MPMX20_03658at 3852.603 kb on - strand, within MPMX20_03658at 3852.665 kb on + strand, within MPMX20_03658at 3852.665 kb on + strand, within MPMX20_03658at 3852.665 kb on + strand, within MPMX20_03658at 3852.665 kb on + strand, within MPMX20_03658at 3852.665 kb on + strand, within MPMX20_03658at 3852.665 kb on + strand, within MPMX20_03658at 3852.673 kb on - strand, within MPMX20_03658at 3852.673 kb on - strand, within MPMX20_03658at 3852.673 kb on - strand, within MPMX20_03658at 3852.686 kb on + strand, within MPMX20_03658at 3852.686 kb on + strand, within MPMX20_03658at 3852.694 kb on - strand, within MPMX20_03658at 3852.694 kb on - strand, within MPMX20_03658at 3852.694 kb on - strand, within MPMX20_03658at 3852.720 kb on - strand, within MPMX20_03658at 3852.804 kb on + strand, within MPMX20_03658at 3852.904 kb on + strand, within MPMX20_03658at 3852.912 kb on - strand, within MPMX20_03658at 3852.935 kb on + strand, within MPMX20_03658at 3852.954 kb on + strand, within MPMX20_03658at 3852.954 kb on + strand, within MPMX20_03658at 3852.954 kb on + strand, within MPMX20_03658at 3852.962 kb on + strand, within MPMX20_03658at 3853.019 kb on + strand, within MPMX20_03658at 3853.146 kb on + strand, within MPMX20_03658at 3853.146 kb on + strand, within MPMX20_03658at 3853.146 kb on + strand, within MPMX20_03658at 3853.154 kb on - strand, within MPMX20_03658at 3853.246 kb on - strand, within MPMX20_03658at 3853.270 kb on - strand, within MPMX20_03658at 3853.272 kb on - strand, within MPMX20_03658at 3853.295 kb on + strand, within MPMX20_03658

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,850,106 + MPMX20_03656 0.31 +0.3
3,850,132 + MPMX20_03656 0.33 -1.1
3,850,133 - MPMX20_03656 0.33 -0.3
3,850,133 - MPMX20_03656 0.33 -1.1
3,850,145 + MPMX20_03656 0.34 +0.7
3,850,200 + MPMX20_03656 0.39 +0.8
3,850,206 + MPMX20_03656 0.39 -1.6
3,850,240 - MPMX20_03656 0.42 +0.5
3,850,240 - MPMX20_03656 0.42 -0.3
3,850,282 - MPMX20_03656 0.46 -0.5
3,850,307 + MPMX20_03656 0.48 -0.7
3,850,312 + MPMX20_03656 0.49 -1.1
3,850,320 - MPMX20_03656 0.49 -0.3
3,850,321 + MPMX20_03656 0.49 -1.8
3,850,329 - MPMX20_03656 0.50 +0.5
3,850,356 + MPMX20_03656 0.52 -1.7
3,850,356 + MPMX20_03656 0.52 +0.5
3,850,356 + MPMX20_03656 0.52 +0.8
3,850,375 + MPMX20_03656 0.54 -0.9
3,850,375 + MPMX20_03656 0.54 +0.5
3,850,375 + MPMX20_03656 0.54 -1.0
3,850,388 - MPMX20_03656 0.55 +1.1
3,850,393 - MPMX20_03656 0.56 -1.6
3,850,412 - MPMX20_03656 0.57 -0.4
3,850,414 + MPMX20_03656 0.58 -1.1
3,850,414 + MPMX20_03656 0.58 -0.3
3,850,414 + MPMX20_03656 0.58 -0.3
3,850,422 - MPMX20_03656 0.58 -0.5
3,850,422 - MPMX20_03656 0.58 -0.4
3,850,444 + MPMX20_03656 0.60 -1.1
3,850,454 - MPMX20_03656 0.61 -0.3
3,850,527 - MPMX20_03656 0.67 -1.0
3,850,564 + MPMX20_03656 0.71 -1.9
3,850,572 - MPMX20_03656 0.71 -1.5
3,850,609 + MPMX20_03656 0.75 -0.7
3,850,609 + MPMX20_03656 0.75 -0.7
3,850,617 - MPMX20_03656 0.75 +0.1
3,850,617 - MPMX20_03656 0.75 +0.8
3,850,617 - MPMX20_03656 0.75 +0.2
3,850,617 - MPMX20_03656 0.75 +0.5
3,850,649 + MPMX20_03656 0.78 +1.0
3,850,651 + MPMX20_03656 0.78 +0.7
3,850,708 - MPMX20_03656 0.83 +0.1
3,850,720 - MPMX20_03656 0.84 -1.6
3,850,742 + MPMX20_03656 0.86 +0.0
3,850,770 - MPMX20_03656 0.89 -3.5
3,850,869 - -0.5
3,850,915 - -0.4
3,850,927 - +0.1
3,850,927 - +0.5
3,850,931 + +1.6
3,850,931 + +1.5
3,850,939 - -0.7
3,850,939 - -0.1
3,850,940 - -1.1
3,851,021 + -1.2
3,851,105 + +0.1
3,851,105 + -0.9
3,851,127 + MPMX20_03657 0.11 -1.0
3,851,138 + MPMX20_03657 0.12 -0.5
3,851,146 - MPMX20_03657 0.13 -0.9
3,851,218 + MPMX20_03657 0.18 +0.5
3,851,244 + MPMX20_03657 0.20 +0.1
3,851,252 - MPMX20_03657 0.20 +1.2
3,851,309 + MPMX20_03657 0.25 +0.4
3,851,309 + MPMX20_03657 0.25 -1.3
3,851,317 - MPMX20_03657 0.25 -1.1
3,851,322 - MPMX20_03657 0.26 -0.3
3,851,335 + MPMX20_03657 0.27 -0.4
3,851,335 + MPMX20_03657 0.27 -0.7
3,851,343 - MPMX20_03657 0.27 +2.1
3,851,343 - MPMX20_03657 0.27 -0.0
3,851,350 + MPMX20_03657 0.28 -0.4
3,851,356 + MPMX20_03657 0.28 +1.1
3,851,356 + MPMX20_03657 0.28 -1.1
3,851,364 - MPMX20_03657 0.29 +0.1
3,851,364 - MPMX20_03657 0.29 -1.9
3,851,374 - MPMX20_03657 0.30 -1.3
3,851,374 - MPMX20_03657 0.30 +2.1
3,851,404 + MPMX20_03657 0.32 +1.2
3,851,424 - MPMX20_03657 0.33 +0.5
3,851,424 - MPMX20_03657 0.33 -0.6
3,851,464 + MPMX20_03657 0.36 +0.6
3,851,520 + MPMX20_03657 0.41 -0.2
3,851,520 + MPMX20_03657 0.41 -0.2
3,851,528 - MPMX20_03657 0.41 +0.5
3,851,528 - MPMX20_03657 0.41 -0.7
3,851,593 - MPMX20_03657 0.46 +2.1
3,851,606 + MPMX20_03657 0.47 +0.1
3,851,703 + MPMX20_03657 0.54 +1.0
3,851,703 + MPMX20_03657 0.54 +0.1
3,851,738 + MPMX20_03657 0.57 +2.1
3,851,760 + MPMX20_03657 0.58 +0.4
3,851,904 - MPMX20_03657 0.69 +0.2
3,851,932 + MPMX20_03657 0.71 +1.1
3,851,956 - MPMX20_03657 0.73 +0.5
3,851,993 - MPMX20_03657 0.76 +0.3
3,852,003 + MPMX20_03657 0.77 -0.0
3,852,062 + MPMX20_03657 0.81 -0.6
3,852,062 + MPMX20_03657 0.81 +1.6
3,852,070 - MPMX20_03657 0.82 -3.1
3,852,114 - MPMX20_03657 0.85 -2.0
3,852,154 + MPMX20_03657 0.88 -1.3
3,852,182 - -1.8
3,852,230 + -0.8
3,852,279 + -0.5
3,852,308 + -1.6
3,852,340 + -2.9
3,852,471 + MPMX20_03658 0.10 +2.5
3,852,483 + MPMX20_03658 0.11 +3.1
3,852,595 + MPMX20_03658 0.20 +1.1
3,852,603 - MPMX20_03658 0.20 -0.7
3,852,665 + MPMX20_03658 0.25 +0.9
3,852,665 + MPMX20_03658 0.25 -0.2
3,852,665 + MPMX20_03658 0.25 -1.7
3,852,665 + MPMX20_03658 0.25 -0.9
3,852,665 + MPMX20_03658 0.25 -1.5
3,852,665 + MPMX20_03658 0.25 +0.8
3,852,673 - MPMX20_03658 0.26 -3.7
3,852,673 - MPMX20_03658 0.26 -0.4
3,852,673 - MPMX20_03658 0.26 -0.8
3,852,686 + MPMX20_03658 0.26 +0.1
3,852,686 + MPMX20_03658 0.26 -1.1
3,852,694 - MPMX20_03658 0.27 +0.8
3,852,694 - MPMX20_03658 0.27 +1.2
3,852,694 - MPMX20_03658 0.27 +1.4
3,852,720 - MPMX20_03658 0.29 -0.5
3,852,804 + MPMX20_03658 0.35 -0.7
3,852,904 + MPMX20_03658 0.43 +0.5
3,852,912 - MPMX20_03658 0.43 +0.6
3,852,935 + MPMX20_03658 0.45 -0.0
3,852,954 + MPMX20_03658 0.46 -0.3
3,852,954 + MPMX20_03658 0.46 -0.3
3,852,954 + MPMX20_03658 0.46 +0.7
3,852,962 + MPMX20_03658 0.47 -1.9
3,853,019 + MPMX20_03658 0.51 -0.5
3,853,146 + MPMX20_03658 0.61 +1.7
3,853,146 + MPMX20_03658 0.61 +1.1
3,853,146 + MPMX20_03658 0.61 +0.4
3,853,154 - MPMX20_03658 0.61 +0.5
3,853,246 - MPMX20_03658 0.68 +0.6
3,853,270 - MPMX20_03658 0.70 -1.0
3,853,272 - MPMX20_03658 0.70 -0.5
3,853,295 + MPMX20_03658 0.72 -0.6

Or see this region's nucleotide sequence