Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02081

Experiment: 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02080 and MPMX20_02081 are separated by 18 nucleotidesMPMX20_02081 and MPMX20_02082 are separated by 42 nucleotidesMPMX20_02082 and MPMX20_02083 are separated by 1 nucleotides MPMX20_02080: MPMX20_02080 - Allophanate hydrolase, at 2,174,694 to 2,176,493 _02080 MPMX20_02081: MPMX20_02081 - Tat proofreading chaperone DmsD, at 2,176,512 to 2,177,126 _02081 MPMX20_02082: MPMX20_02082 - Anaerobic dimethyl sulfoxide reductase chain C, at 2,177,169 to 2,178,023 _02082 MPMX20_02083: MPMX20_02083 - Anaerobic dimethyl sulfoxide reductase chain B, at 2,178,025 to 2,178,642 _02083 Position (kb) 2176 2177 2178Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 2175.521 kb on + strand, within MPMX20_02080at 2175.616 kb on - strand, within MPMX20_02080at 2175.627 kb on - strand, within MPMX20_02080at 2175.681 kb on + strand, within MPMX20_02080at 2175.683 kb on + strand, within MPMX20_02080at 2175.752 kb on + strand, within MPMX20_02080at 2175.760 kb on - strand, within MPMX20_02080at 2175.760 kb on - strand, within MPMX20_02080at 2175.767 kb on + strand, within MPMX20_02080at 2175.767 kb on + strand, within MPMX20_02080at 2175.767 kb on + strand, within MPMX20_02080at 2175.767 kb on + strand, within MPMX20_02080at 2175.767 kb on + strand, within MPMX20_02080at 2175.775 kb on - strand, within MPMX20_02080at 2175.775 kb on - strand, within MPMX20_02080at 2175.775 kb on - strand, within MPMX20_02080at 2175.775 kb on - strand, within MPMX20_02080at 2175.989 kb on - strand, within MPMX20_02080at 2175.989 kb on - strand, within MPMX20_02080at 2176.082 kb on - strand, within MPMX20_02080at 2176.084 kb on - strand, within MPMX20_02080at 2176.091 kb on + strand, within MPMX20_02080at 2176.104 kb on + strand, within MPMX20_02080at 2176.112 kb on - strand, within MPMX20_02080at 2176.112 kb on - strand, within MPMX20_02080at 2176.127 kb on + strand, within MPMX20_02080at 2176.140 kb on + strand, within MPMX20_02080at 2176.148 kb on - strand, within MPMX20_02080at 2176.148 kb on - strand, within MPMX20_02080at 2176.164 kb on + strand, within MPMX20_02080at 2176.183 kb on + strand, within MPMX20_02080at 2176.215 kb on + strand, within MPMX20_02080at 2176.253 kb on + strand, within MPMX20_02080at 2176.283 kb on - strand, within MPMX20_02080at 2176.311 kb on + strand, within MPMX20_02080at 2176.319 kb on - strandat 2176.425 kb on + strandat 2176.427 kb on + strandat 2176.433 kb on - strandat 2176.433 kb on - strandat 2176.497 kb on + strandat 2176.500 kb on - strandat 2176.503 kb on + strandat 2176.505 kb on - strandat 2176.511 kb on - strandat 2176.563 kb on + strandat 2176.578 kb on + strand, within MPMX20_02081at 2176.585 kb on + strand, within MPMX20_02081at 2176.600 kb on + strand, within MPMX20_02081at 2176.600 kb on + strand, within MPMX20_02081at 2176.603 kb on - strand, within MPMX20_02081at 2176.608 kb on - strand, within MPMX20_02081at 2176.651 kb on + strand, within MPMX20_02081at 2176.809 kb on - strand, within MPMX20_02081at 2176.809 kb on - strand, within MPMX20_02081at 2176.817 kb on + strand, within MPMX20_02081at 2176.817 kb on + strand, within MPMX20_02081at 2176.825 kb on - strand, within MPMX20_02081at 2176.873 kb on + strand, within MPMX20_02081at 2176.873 kb on + strand, within MPMX20_02081at 2176.881 kb on - strand, within MPMX20_02081at 2176.893 kb on - strand, within MPMX20_02081at 2176.992 kb on + strand, within MPMX20_02081at 2177.000 kb on - strand, within MPMX20_02081at 2177.008 kb on + strand, within MPMX20_02081at 2177.028 kb on - strand, within MPMX20_02081at 2177.086 kb on - strandat 2177.166 kb on + strandat 2177.166 kb on + strandat 2177.166 kb on + strandat 2177.196 kb on - strandat 2177.199 kb on + strandat 2177.398 kb on + strand, within MPMX20_02082at 2177.425 kb on - strand, within MPMX20_02082at 2177.451 kb on + strand, within MPMX20_02082at 2177.451 kb on + strand, within MPMX20_02082at 2177.451 kb on + strand, within MPMX20_02082at 2177.451 kb on + strand, within MPMX20_02082at 2177.451 kb on + strand, within MPMX20_02082at 2177.451 kb on + strand, within MPMX20_02082at 2177.451 kb on + strand, within MPMX20_02082at 2177.451 kb on + strand, within MPMX20_02082at 2177.459 kb on - strand, within MPMX20_02082at 2177.459 kb on - strand, within MPMX20_02082at 2177.459 kb on - strand, within MPMX20_02082at 2177.459 kb on - strand, within MPMX20_02082at 2177.459 kb on - strand, within MPMX20_02082at 2177.527 kb on + strand, within MPMX20_02082at 2177.533 kb on - strand, within MPMX20_02082at 2177.545 kb on + strand, within MPMX20_02082at 2177.545 kb on + strand, within MPMX20_02082at 2177.573 kb on + strand, within MPMX20_02082at 2177.584 kb on + strand, within MPMX20_02082at 2177.603 kb on - strand, within MPMX20_02082at 2177.603 kb on - strand, within MPMX20_02082at 2177.645 kb on - strand, within MPMX20_02082at 2177.654 kb on + strand, within MPMX20_02082at 2177.696 kb on + strand, within MPMX20_02082at 2177.812 kb on + strand, within MPMX20_02082at 2177.819 kb on - strand, within MPMX20_02082at 2177.860 kb on + strand, within MPMX20_02082at 2177.929 kb on + strand, within MPMX20_02082at 2177.980 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,175,521 + MPMX20_02080 0.46 +0.5
2,175,616 - MPMX20_02080 0.51 -0.6
2,175,627 - MPMX20_02080 0.52 +0.4
2,175,681 + MPMX20_02080 0.55 -1.8
2,175,683 + MPMX20_02080 0.55 -0.7
2,175,752 + MPMX20_02080 0.59 +0.8
2,175,760 - MPMX20_02080 0.59 +0.5
2,175,760 - MPMX20_02080 0.59 +0.5
2,175,767 + MPMX20_02080 0.60 -0.4
2,175,767 + MPMX20_02080 0.60 -1.0
2,175,767 + MPMX20_02080 0.60 -0.0
2,175,767 + MPMX20_02080 0.60 +1.0
2,175,767 + MPMX20_02080 0.60 -1.2
2,175,775 - MPMX20_02080 0.60 +0.0
2,175,775 - MPMX20_02080 0.60 -0.3
2,175,775 - MPMX20_02080 0.60 -1.3
2,175,775 - MPMX20_02080 0.60 -1.7
2,175,989 - MPMX20_02080 0.72 +2.9
2,175,989 - MPMX20_02080 0.72 -0.4
2,176,082 - MPMX20_02080 0.77 -0.6
2,176,084 - MPMX20_02080 0.77 +1.0
2,176,091 + MPMX20_02080 0.78 -0.2
2,176,104 + MPMX20_02080 0.78 -1.2
2,176,112 - MPMX20_02080 0.79 +2.1
2,176,112 - MPMX20_02080 0.79 -0.9
2,176,127 + MPMX20_02080 0.80 -0.9
2,176,140 + MPMX20_02080 0.80 -0.6
2,176,148 - MPMX20_02080 0.81 -0.8
2,176,148 - MPMX20_02080 0.81 -1.2
2,176,164 + MPMX20_02080 0.82 -2.2
2,176,183 + MPMX20_02080 0.83 +0.8
2,176,215 + MPMX20_02080 0.84 -0.5
2,176,253 + MPMX20_02080 0.87 -0.6
2,176,283 - MPMX20_02080 0.88 +1.0
2,176,311 + MPMX20_02080 0.90 +0.1
2,176,319 - -0.4
2,176,425 + -1.7
2,176,427 + -1.0
2,176,433 - -0.1
2,176,433 - +0.9
2,176,497 + -1.0
2,176,500 - -0.7
2,176,503 + -0.6
2,176,505 - -0.7
2,176,511 - +1.5
2,176,563 + +0.5
2,176,578 + MPMX20_02081 0.11 +0.6
2,176,585 + MPMX20_02081 0.12 +0.3
2,176,600 + MPMX20_02081 0.14 +0.3
2,176,600 + MPMX20_02081 0.14 +0.1
2,176,603 - MPMX20_02081 0.15 +1.1
2,176,608 - MPMX20_02081 0.16 -0.9
2,176,651 + MPMX20_02081 0.23 +1.7
2,176,809 - MPMX20_02081 0.48 +1.1
2,176,809 - MPMX20_02081 0.48 +0.6
2,176,817 + MPMX20_02081 0.50 +3.1
2,176,817 + MPMX20_02081 0.50 +1.4
2,176,825 - MPMX20_02081 0.51 +1.3
2,176,873 + MPMX20_02081 0.59 +1.8
2,176,873 + MPMX20_02081 0.59 +1.6
2,176,881 - MPMX20_02081 0.60 -1.2
2,176,893 - MPMX20_02081 0.62 +1.0
2,176,992 + MPMX20_02081 0.78 +0.7
2,177,000 - MPMX20_02081 0.79 +1.1
2,177,008 + MPMX20_02081 0.81 -0.5
2,177,028 - MPMX20_02081 0.84 +1.1
2,177,086 - +1.1
2,177,166 + +0.3
2,177,166 + -1.4
2,177,166 + -0.3
2,177,196 - -1.8
2,177,199 + -1.3
2,177,398 + MPMX20_02082 0.27 -0.5
2,177,425 - MPMX20_02082 0.30 -0.0
2,177,451 + MPMX20_02082 0.33 -0.6
2,177,451 + MPMX20_02082 0.33 +2.9
2,177,451 + MPMX20_02082 0.33 -1.0
2,177,451 + MPMX20_02082 0.33 +1.0
2,177,451 + MPMX20_02082 0.33 -1.0
2,177,451 + MPMX20_02082 0.33 -0.3
2,177,451 + MPMX20_02082 0.33 -0.4
2,177,451 + MPMX20_02082 0.33 +0.5
2,177,459 - MPMX20_02082 0.34 -1.8
2,177,459 - MPMX20_02082 0.34 -2.4
2,177,459 - MPMX20_02082 0.34 +0.8
2,177,459 - MPMX20_02082 0.34 +1.3
2,177,459 - MPMX20_02082 0.34 -1.2
2,177,527 + MPMX20_02082 0.42 -1.3
2,177,533 - MPMX20_02082 0.43 -0.4
2,177,545 + MPMX20_02082 0.44 +1.9
2,177,545 + MPMX20_02082 0.44 -2.0
2,177,573 + MPMX20_02082 0.47 +1.3
2,177,584 + MPMX20_02082 0.49 +0.9
2,177,603 - MPMX20_02082 0.51 +0.0
2,177,603 - MPMX20_02082 0.51 +1.1
2,177,645 - MPMX20_02082 0.56 +0.5
2,177,654 + MPMX20_02082 0.57 +0.0
2,177,696 + MPMX20_02082 0.62 -0.3
2,177,812 + MPMX20_02082 0.75 +0.9
2,177,819 - MPMX20_02082 0.76 +0.2
2,177,860 + MPMX20_02082 0.81 +6.3
2,177,929 + MPMX20_02082 0.89 +0.5
2,177,980 - +2.9

Or see this region's nucleotide sequence