Experiment: 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01014 and MPMX20_01015 are separated by 45 nucleotides MPMX20_01015 and MPMX20_01016 overlap by 38 nucleotides
MPMX20_01014: MPMX20_01014 - tRNA sulfurtransferase, at 1,066,740 to 1,068,188
_01014
MPMX20_01015: MPMX20_01015 - Protein/nucleic acid deglycase 3, at 1,068,234 to 1,068,827
_01015
MPMX20_01016: MPMX20_01016 - 2-dehydropantoate 2-reductase, at 1,068,790 to 1,069,701
_01016
Position (kb)
1068
1069 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1067.320 kb on + strand, within MPMX20_01014 at 1067.331 kb on - strand, within MPMX20_01014 at 1067.360 kb on - strand, within MPMX20_01014 at 1067.380 kb on - strand, within MPMX20_01014 at 1067.426 kb on - strand, within MPMX20_01014 at 1067.534 kb on - strand, within MPMX20_01014 at 1067.570 kb on + strand, within MPMX20_01014 at 1067.570 kb on + strand, within MPMX20_01014 at 1067.578 kb on - strand, within MPMX20_01014 at 1067.604 kb on + strand, within MPMX20_01014 at 1067.610 kb on + strand, within MPMX20_01014 at 1067.623 kb on + strand, within MPMX20_01014 at 1068.073 kb on + strand at 1068.081 kb on - strand at 1068.106 kb on - strand at 1068.117 kb on + strand at 1068.117 kb on + strand at 1068.117 kb on + strand at 1068.150 kb on + strand at 1068.181 kb on - strand at 1068.239 kb on - strand at 1068.454 kb on + strand, within MPMX20_01015 at 1068.533 kb on - strand, within MPMX20_01015 at 1068.614 kb on + strand, within MPMX20_01015 at 1068.677 kb on - strand, within MPMX20_01015 at 1068.783 kb on - strand at 1068.810 kb on - strand at 1068.820 kb on - strand at 1068.833 kb on - strand at 1068.837 kb on + strand at 1068.837 kb on + strand at 1068.850 kb on - strand at 1068.922 kb on + strand, within MPMX20_01016 at 1069.018 kb on + strand, within MPMX20_01016 at 1069.074 kb on - strand, within MPMX20_01016 at 1069.207 kb on - strand, within MPMX20_01016 at 1069.207 kb on - strand, within MPMX20_01016 at 1069.379 kb on + strand, within MPMX20_01016 at 1069.379 kb on + strand, within MPMX20_01016 at 1069.422 kb on + strand, within MPMX20_01016 at 1069.422 kb on + strand, within MPMX20_01016 at 1069.472 kb on + strand, within MPMX20_01016 at 1069.484 kb on + strand, within MPMX20_01016 at 1069.560 kb on - strand, within MPMX20_01016 at 1069.589 kb on - strand, within MPMX20_01016 at 1069.597 kb on + strand, within MPMX20_01016 at 1069.605 kb on - strand, within MPMX20_01016 at 1069.605 kb on - strand, within MPMX20_01016 at 1069.618 kb on + strand at 1069.618 kb on + strand at 1069.618 kb on + strand at 1069.618 kb on + strand at 1069.618 kb on + strand at 1069.626 kb on + strand at 1069.626 kb on - strand at 1069.626 kb on - strand at 1069.626 kb on - strand at 1069.655 kb on + strand at 1069.663 kb on - strand at 1069.663 kb on - strand at 1069.673 kb on - strand at 1069.673 kb on - strand at 1069.679 kb on + strand at 1069.687 kb on - strand at 1069.744 kb on + strand at 1069.797 kb on + strand at 1069.801 kb on + strand at 1069.816 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,067,320 + MPMX20_01014 0.40 -0.5 1,067,331 - MPMX20_01014 0.41 +2.5 1,067,360 - MPMX20_01014 0.43 -0.5 1,067,380 - MPMX20_01014 0.44 +3.0 1,067,426 - MPMX20_01014 0.47 -2.3 1,067,534 - MPMX20_01014 0.55 -0.3 1,067,570 + MPMX20_01014 0.57 +0.6 1,067,570 + MPMX20_01014 0.57 -0.8 1,067,578 - MPMX20_01014 0.58 +0.5 1,067,604 + MPMX20_01014 0.60 +0.0 1,067,610 + MPMX20_01014 0.60 -0.9 1,067,623 + MPMX20_01014 0.61 -1.5 1,068,073 + +1.6 1,068,081 - +3.0 1,068,106 - +0.2 1,068,117 + -0.3 1,068,117 + +0.5 1,068,117 + -0.4 1,068,150 + +0.7 1,068,181 - +0.2 1,068,239 - -2.4 1,068,454 + MPMX20_01015 0.37 +0.5 1,068,533 - MPMX20_01015 0.50 -1.9 1,068,614 + MPMX20_01015 0.64 -1.7 1,068,677 - MPMX20_01015 0.75 +1.5 1,068,783 - -0.6 1,068,810 - -0.3 1,068,820 - -1.3 1,068,833 - -0.8 1,068,837 + -2.5 1,068,837 + -1.8 1,068,850 - -0.3 1,068,922 + MPMX20_01016 0.14 -0.3 1,069,018 + MPMX20_01016 0.25 +1.1 1,069,074 - MPMX20_01016 0.31 -0.5 1,069,207 - MPMX20_01016 0.46 -0.5 1,069,207 - MPMX20_01016 0.46 +1.0 1,069,379 + MPMX20_01016 0.65 -0.7 1,069,379 + MPMX20_01016 0.65 -1.3 1,069,422 + MPMX20_01016 0.69 +2.9 1,069,422 + MPMX20_01016 0.69 -2.2 1,069,472 + MPMX20_01016 0.75 +1.4 1,069,484 + MPMX20_01016 0.76 -1.7 1,069,560 - MPMX20_01016 0.84 +4.9 1,069,589 - MPMX20_01016 0.88 -1.5 1,069,597 + MPMX20_01016 0.88 +1.5 1,069,605 - MPMX20_01016 0.89 -0.8 1,069,605 - MPMX20_01016 0.89 -0.5 1,069,618 + -1.0 1,069,618 + -1.8 1,069,618 + -1.0 1,069,618 + -0.3 1,069,618 + -1.0 1,069,626 + +3.0 1,069,626 - -1.7 1,069,626 - -0.3 1,069,626 - +1.0 1,069,655 + +0.6 1,069,663 - +0.2 1,069,663 - +2.0 1,069,673 - -0.3 1,069,673 - +0.0 1,069,679 + +0.8 1,069,687 - +0.8 1,069,744 + -1.1 1,069,797 + +0.5 1,069,801 + -0.3 1,069,816 + +0.0
Or see this region's nucleotide sequence