Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04248

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04246 and MPMX20_04247 are separated by 15 nucleotidesMPMX20_04247 and MPMX20_04248 overlap by 12 nucleotidesMPMX20_04248 and MPMX20_04249 overlap by 1 nucleotidesMPMX20_04249 and MPMX20_04250 are separated by 2 nucleotides MPMX20_04246: MPMX20_04246 - putative ABC transporter ATP-binding protein YheS, at 4,428,950 to 4,430,854 _04246 MPMX20_04247: MPMX20_04247 - HTH-type transcriptional regulator GltC, at 4,430,870 to 4,431,820 _04247 MPMX20_04248: MPMX20_04248 - Malonyl CoA-acyl carrier protein transacylase, at 4,431,809 to 4,432,705 _04248 MPMX20_04249: MPMX20_04249 - Phosphoribosyl-dephospho-CoA transferase, at 4,432,705 to 4,433,322 _04249 MPMX20_04250: MPMX20_04250 - hypothetical protein, at 4,433,325 to 4,434,284 _04250 Position (kb) 4431 4432 4433Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 4430.827 kb on + strandat 4430.892 kb on + strandat 4430.972 kb on - strand, within MPMX20_04247at 4430.984 kb on + strand, within MPMX20_04247at 4430.992 kb on - strand, within MPMX20_04247at 4431.067 kb on + strand, within MPMX20_04247at 4431.075 kb on - strand, within MPMX20_04247at 4431.134 kb on - strand, within MPMX20_04247at 4431.153 kb on + strand, within MPMX20_04247at 4431.153 kb on + strand, within MPMX20_04247at 4431.158 kb on + strand, within MPMX20_04247at 4431.161 kb on - strand, within MPMX20_04247at 4431.166 kb on - strand, within MPMX20_04247at 4431.243 kb on + strand, within MPMX20_04247at 4431.278 kb on + strand, within MPMX20_04247at 4431.281 kb on - strand, within MPMX20_04247at 4431.307 kb on - strand, within MPMX20_04247at 4431.321 kb on - strand, within MPMX20_04247at 4431.326 kb on - strand, within MPMX20_04247at 4431.361 kb on - strand, within MPMX20_04247at 4431.363 kb on + strand, within MPMX20_04247at 4431.371 kb on - strand, within MPMX20_04247at 4431.371 kb on - strand, within MPMX20_04247at 4431.380 kb on - strand, within MPMX20_04247at 4431.417 kb on + strand, within MPMX20_04247at 4431.484 kb on + strand, within MPMX20_04247at 4431.596 kb on - strand, within MPMX20_04247at 4431.641 kb on + strand, within MPMX20_04247at 4431.643 kb on - strand, within MPMX20_04247at 4431.649 kb on - strand, within MPMX20_04247at 4431.667 kb on - strand, within MPMX20_04247at 4431.673 kb on + strand, within MPMX20_04247at 4431.718 kb on - strand, within MPMX20_04247at 4431.743 kb on - strandat 4431.808 kb on - strandat 4431.808 kb on - strandat 4431.833 kb on + strandat 4431.845 kb on + strandat 4431.849 kb on + strandat 4431.908 kb on + strand, within MPMX20_04248at 4431.908 kb on + strand, within MPMX20_04248at 4431.908 kb on + strand, within MPMX20_04248at 4431.908 kb on + strand, within MPMX20_04248at 4431.908 kb on + strand, within MPMX20_04248at 4431.916 kb on - strand, within MPMX20_04248at 4431.984 kb on - strand, within MPMX20_04248at 4432.069 kb on + strand, within MPMX20_04248at 4432.069 kb on + strand, within MPMX20_04248at 4432.069 kb on + strand, within MPMX20_04248at 4432.077 kb on - strand, within MPMX20_04248at 4432.077 kb on - strand, within MPMX20_04248at 4432.077 kb on - strand, within MPMX20_04248at 4432.077 kb on - strand, within MPMX20_04248at 4432.077 kb on - strand, within MPMX20_04248at 4432.237 kb on - strand, within MPMX20_04248at 4432.237 kb on - strand, within MPMX20_04248at 4432.308 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.348 kb on + strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.356 kb on - strand, within MPMX20_04248at 4432.367 kb on + strand, within MPMX20_04248at 4432.375 kb on - strand, within MPMX20_04248at 4432.375 kb on - strand, within MPMX20_04248at 4432.466 kb on - strand, within MPMX20_04248at 4432.501 kb on + strand, within MPMX20_04248at 4432.501 kb on + strand, within MPMX20_04248at 4432.522 kb on - strand, within MPMX20_04248at 4432.554 kb on + strand, within MPMX20_04248at 4432.562 kb on - strand, within MPMX20_04248at 4432.573 kb on + strand, within MPMX20_04248at 4432.612 kb on - strand, within MPMX20_04248at 4432.645 kb on + strandat 4432.678 kb on + strandat 4432.678 kb on + strandat 4432.686 kb on - strandat 4432.754 kb on - strandat 4432.806 kb on + strand, within MPMX20_04249at 4432.961 kb on + strand, within MPMX20_04249at 4432.962 kb on - strand, within MPMX20_04249at 4432.968 kb on - strand, within MPMX20_04249at 4433.093 kb on + strand, within MPMX20_04249at 4433.101 kb on - strand, within MPMX20_04249at 4433.119 kb on - strand, within MPMX20_04249at 4433.160 kb on - strand, within MPMX20_04249at 4433.222 kb on + strand, within MPMX20_04249at 4433.235 kb on - strand, within MPMX20_04249at 4433.235 kb on - strand, within MPMX20_04249at 4433.237 kb on + strand, within MPMX20_04249at 4433.248 kb on + strand, within MPMX20_04249at 4433.280 kb on + strandat 4433.280 kb on + strandat 4433.332 kb on + strandat 4433.340 kb on - strandat 4433.375 kb on + strandat 4433.415 kb on - strandat 4433.422 kb on + strand, within MPMX20_04250at 4433.423 kb on - strand, within MPMX20_04250at 4433.441 kb on - strand, within MPMX20_04250at 4433.472 kb on + strand, within MPMX20_04250at 4433.477 kb on + strand, within MPMX20_04250at 4433.480 kb on - strand, within MPMX20_04250at 4433.492 kb on + strand, within MPMX20_04250at 4433.492 kb on + strand, within MPMX20_04250at 4433.500 kb on - strand, within MPMX20_04250at 4433.505 kb on - strand, within MPMX20_04250at 4433.507 kb on - strand, within MPMX20_04250at 4433.555 kb on + strand, within MPMX20_04250at 4433.564 kb on + strand, within MPMX20_04250at 4433.592 kb on - strand, within MPMX20_04250at 4433.621 kb on - strand, within MPMX20_04250at 4433.623 kb on + strand, within MPMX20_04250at 4433.623 kb on + strand, within MPMX20_04250at 4433.623 kb on + strand, within MPMX20_04250at 4433.623 kb on + strand, within MPMX20_04250at 4433.631 kb on - strand, within MPMX20_04250at 4433.631 kb on - strand, within MPMX20_04250at 4433.631 kb on - strand, within MPMX20_04250

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,430,827 + +0.0
4,430,892 + +2.2
4,430,972 - MPMX20_04247 0.11 +1.2
4,430,984 + MPMX20_04247 0.12 +0.0
4,430,992 - MPMX20_04247 0.13 +1.1
4,431,067 + MPMX20_04247 0.21 -0.2
4,431,075 - MPMX20_04247 0.22 -0.2
4,431,134 - MPMX20_04247 0.28 +2.8
4,431,153 + MPMX20_04247 0.30 -0.2
4,431,153 + MPMX20_04247 0.30 +0.5
4,431,158 + MPMX20_04247 0.30 +2.8
4,431,161 - MPMX20_04247 0.31 +6.4
4,431,166 - MPMX20_04247 0.31 -0.1
4,431,243 + MPMX20_04247 0.39 +1.2
4,431,278 + MPMX20_04247 0.43 +0.6
4,431,281 - MPMX20_04247 0.43 -2.4
4,431,307 - MPMX20_04247 0.46 -0.1
4,431,321 - MPMX20_04247 0.47 -1.5
4,431,326 - MPMX20_04247 0.48 -0.7
4,431,361 - MPMX20_04247 0.52 +1.2
4,431,363 + MPMX20_04247 0.52 -2.6
4,431,371 - MPMX20_04247 0.53 +0.1
4,431,371 - MPMX20_04247 0.53 -0.7
4,431,380 - MPMX20_04247 0.54 +0.8
4,431,417 + MPMX20_04247 0.58 +0.3
4,431,484 + MPMX20_04247 0.65 +1.4
4,431,596 - MPMX20_04247 0.76 +0.5
4,431,641 + MPMX20_04247 0.81 +0.2
4,431,643 - MPMX20_04247 0.81 +1.2
4,431,649 - MPMX20_04247 0.82 -0.3
4,431,667 - MPMX20_04247 0.84 +2.1
4,431,673 + MPMX20_04247 0.84 +0.2
4,431,718 - MPMX20_04247 0.89 -2.1
4,431,743 - -2.8
4,431,808 - +0.1
4,431,808 - -1.3
4,431,833 + +1.2
4,431,845 + -1.1
4,431,849 + -1.3
4,431,908 + MPMX20_04248 0.11 -1.9
4,431,908 + MPMX20_04248 0.11 +2.5
4,431,908 + MPMX20_04248 0.11 +1.8
4,431,908 + MPMX20_04248 0.11 +0.2
4,431,908 + MPMX20_04248 0.11 -0.5
4,431,916 - MPMX20_04248 0.12 +1.2
4,431,984 - MPMX20_04248 0.20 +1.7
4,432,069 + MPMX20_04248 0.29 -2.0
4,432,069 + MPMX20_04248 0.29 +1.0
4,432,069 + MPMX20_04248 0.29 -1.2
4,432,077 - MPMX20_04248 0.30 -0.6
4,432,077 - MPMX20_04248 0.30 +0.8
4,432,077 - MPMX20_04248 0.30 -1.4
4,432,077 - MPMX20_04248 0.30 +0.8
4,432,077 - MPMX20_04248 0.30 -1.2
4,432,237 - MPMX20_04248 0.48 +1.4
4,432,237 - MPMX20_04248 0.48 +0.8
4,432,308 + MPMX20_04248 0.56 +1.2
4,432,348 + MPMX20_04248 0.60 +1.2
4,432,348 + MPMX20_04248 0.60 -1.5
4,432,348 + MPMX20_04248 0.60 -1.8
4,432,348 + MPMX20_04248 0.60 -0.0
4,432,348 + MPMX20_04248 0.60 +0.2
4,432,348 + MPMX20_04248 0.60 -3.2
4,432,348 + MPMX20_04248 0.60 +0.3
4,432,348 + MPMX20_04248 0.60 +1.7
4,432,348 + MPMX20_04248 0.60 -2.2
4,432,348 + MPMX20_04248 0.60 -0.2
4,432,348 + MPMX20_04248 0.60 +0.2
4,432,356 - MPMX20_04248 0.61 +1.7
4,432,356 - MPMX20_04248 0.61 -2.4
4,432,356 - MPMX20_04248 0.61 +0.8
4,432,356 - MPMX20_04248 0.61 -0.3
4,432,356 - MPMX20_04248 0.61 +1.3
4,432,356 - MPMX20_04248 0.61 -2.0
4,432,356 - MPMX20_04248 0.61 +2.4
4,432,356 - MPMX20_04248 0.61 -1.0
4,432,356 - MPMX20_04248 0.61 -1.7
4,432,356 - MPMX20_04248 0.61 +1.4
4,432,356 - MPMX20_04248 0.61 -0.7
4,432,356 - MPMX20_04248 0.61 -1.1
4,432,367 + MPMX20_04248 0.62 -1.0
4,432,375 - MPMX20_04248 0.63 -0.4
4,432,375 - MPMX20_04248 0.63 +1.2
4,432,466 - MPMX20_04248 0.73 -0.6
4,432,501 + MPMX20_04248 0.77 +0.0
4,432,501 + MPMX20_04248 0.77 +1.2
4,432,522 - MPMX20_04248 0.79 +0.8
4,432,554 + MPMX20_04248 0.83 -1.8
4,432,562 - MPMX20_04248 0.84 -0.9
4,432,573 + MPMX20_04248 0.85 -1.3
4,432,612 - MPMX20_04248 0.90 +2.4
4,432,645 + -0.6
4,432,678 + +0.4
4,432,678 + +1.2
4,432,686 - -0.8
4,432,754 - -0.3
4,432,806 + MPMX20_04249 0.16 +2.8
4,432,961 + MPMX20_04249 0.41 -1.2
4,432,962 - MPMX20_04249 0.42 +0.8
4,432,968 - MPMX20_04249 0.43 +0.0
4,433,093 + MPMX20_04249 0.63 -1.3
4,433,101 - MPMX20_04249 0.64 +0.8
4,433,119 - MPMX20_04249 0.67 -0.6
4,433,160 - MPMX20_04249 0.74 +2.8
4,433,222 + MPMX20_04249 0.84 -1.4
4,433,235 - MPMX20_04249 0.86 -1.4
4,433,235 - MPMX20_04249 0.86 -2.3
4,433,237 + MPMX20_04249 0.86 +2.2
4,433,248 + MPMX20_04249 0.88 -0.8
4,433,280 + -2.1
4,433,280 + +1.1
4,433,332 + -0.6
4,433,340 - -0.3
4,433,375 + -2.4
4,433,415 - -1.0
4,433,422 + MPMX20_04250 0.10 +0.5
4,433,423 - MPMX20_04250 0.10 +0.8
4,433,441 - MPMX20_04250 0.12 +0.4
4,433,472 + MPMX20_04250 0.15 +1.2
4,433,477 + MPMX20_04250 0.16 -1.2
4,433,480 - MPMX20_04250 0.16 +1.4
4,433,492 + MPMX20_04250 0.17 -2.2
4,433,492 + MPMX20_04250 0.17 -0.8
4,433,500 - MPMX20_04250 0.18 -0.6
4,433,505 - MPMX20_04250 0.19 -2.6
4,433,507 - MPMX20_04250 0.19 +0.8
4,433,555 + MPMX20_04250 0.24 -2.0
4,433,564 + MPMX20_04250 0.25 +1.2
4,433,592 - MPMX20_04250 0.28 -2.2
4,433,621 - MPMX20_04250 0.31 -0.6
4,433,623 + MPMX20_04250 0.31 +0.8
4,433,623 + MPMX20_04250 0.31 -1.0
4,433,623 + MPMX20_04250 0.31 -1.0
4,433,623 + MPMX20_04250 0.31 +0.2
4,433,631 - MPMX20_04250 0.32 -1.5
4,433,631 - MPMX20_04250 0.32 -1.6
4,433,631 - MPMX20_04250 0.32 -1.8

Or see this region's nucleotide sequence