Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03715

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03714 and MPMX20_03715 are separated by 313 nucleotidesMPMX20_03715 and MPMX20_03716 are separated by 63 nucleotides MPMX20_03714: MPMX20_03714 - Arabinose-proton symporter, at 3,915,927 to 3,917,342 _03714 MPMX20_03715: MPMX20_03715 - 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase, at 3,917,656 to 3,918,417 _03715 MPMX20_03716: MPMX20_03716 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase, at 3,918,481 to 3,919,317 _03716 Position (kb) 3917 3918 3919Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 3916.695 kb on - strand, within MPMX20_03714at 3916.838 kb on + strand, within MPMX20_03714at 3916.886 kb on + strand, within MPMX20_03714at 3916.887 kb on + strand, within MPMX20_03714at 3916.894 kb on - strand, within MPMX20_03714at 3916.936 kb on + strand, within MPMX20_03714at 3916.936 kb on + strand, within MPMX20_03714at 3916.951 kb on + strand, within MPMX20_03714at 3916.951 kb on + strand, within MPMX20_03714at 3916.951 kb on + strand, within MPMX20_03714at 3916.951 kb on + strand, within MPMX20_03714at 3916.951 kb on + strand, within MPMX20_03714at 3916.959 kb on - strand, within MPMX20_03714at 3916.959 kb on - strand, within MPMX20_03714at 3916.959 kb on - strand, within MPMX20_03714at 3916.962 kb on + strand, within MPMX20_03714at 3916.970 kb on + strand, within MPMX20_03714at 3916.983 kb on - strand, within MPMX20_03714at 3916.983 kb on - strand, within MPMX20_03714at 3916.993 kb on - strand, within MPMX20_03714at 3916.993 kb on - strand, within MPMX20_03714at 3916.995 kb on + strand, within MPMX20_03714at 3917.005 kb on + strand, within MPMX20_03714at 3917.094 kb on + strand, within MPMX20_03714at 3917.107 kb on + strand, within MPMX20_03714at 3917.107 kb on + strand, within MPMX20_03714at 3917.117 kb on - strand, within MPMX20_03714at 3917.170 kb on - strand, within MPMX20_03714at 3917.205 kb on - strandat 3917.224 kb on + strandat 3917.241 kb on + strandat 3917.250 kb on + strandat 3917.297 kb on + strandat 3917.317 kb on + strandat 3917.318 kb on + strandat 3917.318 kb on + strandat 3917.327 kb on + strandat 3917.395 kb on + strandat 3917.463 kb on - strandat 3917.582 kb on - strandat 3917.589 kb on - strandat 3917.623 kb on + strandat 3917.635 kb on + strandat 3917.643 kb on - strandat 3917.680 kb on - strandat 3917.688 kb on + strandat 3917.688 kb on + strandat 3917.688 kb on + strandat 3917.690 kb on + strandat 3917.693 kb on - strandat 3917.696 kb on - strandat 3917.698 kb on - strandat 3917.698 kb on - strandat 3917.750 kb on - strand, within MPMX20_03715at 3917.750 kb on - strand, within MPMX20_03715at 3917.778 kb on + strand, within MPMX20_03715at 3917.786 kb on - strand, within MPMX20_03715at 3917.798 kb on + strand, within MPMX20_03715at 3917.803 kb on + strand, within MPMX20_03715at 3917.808 kb on + strand, within MPMX20_03715at 3917.811 kb on - strand, within MPMX20_03715at 3917.816 kb on + strand, within MPMX20_03715at 3917.816 kb on - strand, within MPMX20_03715at 3917.831 kb on + strand, within MPMX20_03715at 3917.836 kb on + strand, within MPMX20_03715at 3917.839 kb on - strand, within MPMX20_03715at 3917.845 kb on + strand, within MPMX20_03715at 3917.856 kb on + strand, within MPMX20_03715at 3917.869 kb on + strand, within MPMX20_03715at 3917.884 kb on - strand, within MPMX20_03715at 3917.893 kb on + strand, within MPMX20_03715at 3917.897 kb on + strand, within MPMX20_03715at 3917.942 kb on + strand, within MPMX20_03715at 3917.942 kb on + strand, within MPMX20_03715at 3917.955 kb on + strand, within MPMX20_03715at 3917.979 kb on + strand, within MPMX20_03715at 3917.979 kb on + strand, within MPMX20_03715at 3917.979 kb on + strand, within MPMX20_03715at 3918.001 kb on + strand, within MPMX20_03715at 3918.021 kb on - strand, within MPMX20_03715at 3918.041 kb on + strand, within MPMX20_03715at 3918.070 kb on - strand, within MPMX20_03715at 3918.070 kb on - strand, within MPMX20_03715at 3918.083 kb on - strand, within MPMX20_03715at 3918.089 kb on + strand, within MPMX20_03715at 3918.100 kb on - strand, within MPMX20_03715at 3918.135 kb on + strand, within MPMX20_03715at 3918.143 kb on - strand, within MPMX20_03715at 3918.187 kb on + strand, within MPMX20_03715at 3918.187 kb on + strand, within MPMX20_03715at 3918.195 kb on + strand, within MPMX20_03715at 3918.195 kb on + strand, within MPMX20_03715at 3918.195 kb on + strand, within MPMX20_03715at 3918.195 kb on - strand, within MPMX20_03715at 3918.203 kb on - strand, within MPMX20_03715at 3918.203 kb on - strand, within MPMX20_03715at 3918.282 kb on - strand, within MPMX20_03715at 3918.301 kb on - strand, within MPMX20_03715at 3918.301 kb on - strand, within MPMX20_03715at 3918.338 kb on + strand, within MPMX20_03715at 3918.343 kb on + strandat 3918.344 kb on + strandat 3918.344 kb on + strandat 3918.351 kb on - strandat 3918.383 kb on + strandat 3918.383 kb on + strandat 3918.383 kb on + strandat 3918.391 kb on - strandat 3918.391 kb on - strandat 3918.441 kb on + strandat 3918.444 kb on + strandat 3918.444 kb on + strandat 3918.466 kb on - strandat 3918.466 kb on - strandat 3918.488 kb on + strandat 3918.585 kb on + strand, within MPMX20_03716at 3918.593 kb on - strand, within MPMX20_03716at 3918.718 kb on + strand, within MPMX20_03716at 3918.743 kb on + strand, within MPMX20_03716at 3918.751 kb on - strand, within MPMX20_03716at 3918.751 kb on - strand, within MPMX20_03716at 3918.757 kb on + strand, within MPMX20_03716at 3918.762 kb on + strand, within MPMX20_03716at 3918.767 kb on + strand, within MPMX20_03716at 3918.767 kb on + strand, within MPMX20_03716at 3918.770 kb on - strand, within MPMX20_03716at 3918.775 kb on - strand, within MPMX20_03716at 3918.777 kb on + strand, within MPMX20_03716at 3918.777 kb on + strand, within MPMX20_03716at 3918.777 kb on + strand, within MPMX20_03716at 3918.777 kb on + strand, within MPMX20_03716at 3918.777 kb on + strand, within MPMX20_03716at 3918.785 kb on - strand, within MPMX20_03716at 3918.785 kb on - strand, within MPMX20_03716at 3918.785 kb on - strand, within MPMX20_03716at 3918.785 kb on - strand, within MPMX20_03716at 3918.790 kb on - strand, within MPMX20_03716at 3918.796 kb on + strand, within MPMX20_03716at 3918.797 kb on - strand, within MPMX20_03716at 3918.912 kb on + strand, within MPMX20_03716at 3918.914 kb on + strand, within MPMX20_03716at 3918.920 kb on - strand, within MPMX20_03716at 3918.951 kb on + strand, within MPMX20_03716at 3918.964 kb on - strand, within MPMX20_03716at 3918.984 kb on + strand, within MPMX20_03716at 3919.000 kb on - strand, within MPMX20_03716at 3919.028 kb on + strand, within MPMX20_03716at 3919.028 kb on + strand, within MPMX20_03716at 3919.080 kb on - strand, within MPMX20_03716at 3919.126 kb on + strand, within MPMX20_03716at 3919.127 kb on - strand, within MPMX20_03716at 3919.151 kb on - strand, within MPMX20_03716at 3919.157 kb on - strand, within MPMX20_03716at 3919.163 kb on + strand, within MPMX20_03716at 3919.164 kb on + strand, within MPMX20_03716at 3919.164 kb on + strand, within MPMX20_03716at 3919.172 kb on - strand, within MPMX20_03716at 3919.198 kb on + strand, within MPMX20_03716at 3919.198 kb on + strand, within MPMX20_03716at 3919.198 kb on + strand, within MPMX20_03716at 3919.198 kb on + strand, within MPMX20_03716at 3919.198 kb on + strand, within MPMX20_03716at 3919.198 kb on + strand, within MPMX20_03716at 3919.198 kb on + strand, within MPMX20_03716at 3919.198 kb on + strand, within MPMX20_03716at 3919.199 kb on + strand, within MPMX20_03716at 3919.206 kb on - strand, within MPMX20_03716at 3919.206 kb on - strand, within MPMX20_03716at 3919.206 kb on - strand, within MPMX20_03716at 3919.207 kb on - strand, within MPMX20_03716at 3919.208 kb on + strand, within MPMX20_03716at 3919.216 kb on - strand, within MPMX20_03716at 3919.216 kb on - strand, within MPMX20_03716at 3919.223 kb on + strand, within MPMX20_03716at 3919.231 kb on + strand, within MPMX20_03716at 3919.231 kb on - strand, within MPMX20_03716at 3919.239 kb on - strandat 3919.260 kb on + strandat 3919.260 kb on + strandat 3919.260 kb on + strandat 3919.268 kb on + strandat 3919.268 kb on - strandat 3919.268 kb on - strandat 3919.268 kb on - strandat 3919.276 kb on - strandat 3919.277 kb on + strandat 3919.277 kb on + strandat 3919.285 kb on - strandat 3919.292 kb on + strandat 3919.292 kb on + strandat 3919.292 kb on + strandat 3919.299 kb on + strandat 3919.300 kb on + strandat 3919.323 kb on + strandat 3919.333 kb on + strandat 3919.387 kb on + strandat 3919.390 kb on + strandat 3919.390 kb on + strandat 3919.391 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.392 kb on + strandat 3919.399 kb on - strandat 3919.400 kb on - strandat 3919.400 kb on - strandat 3919.400 kb on - strandat 3919.400 kb on - strandat 3919.400 kb on - strandat 3919.400 kb on - strandat 3919.400 kb on - strandat 3919.400 kb on - strandat 3919.400 kb on - strandat 3919.400 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,916,695 - MPMX20_03714 0.54 +1.1
3,916,838 + MPMX20_03714 0.64 +0.4
3,916,886 + MPMX20_03714 0.68 -0.9
3,916,887 + MPMX20_03714 0.68 +0.1
3,916,894 - MPMX20_03714 0.68 -0.1
3,916,936 + MPMX20_03714 0.71 +0.3
3,916,936 + MPMX20_03714 0.71 +0.7
3,916,951 + MPMX20_03714 0.72 -2.3
3,916,951 + MPMX20_03714 0.72 -0.1
3,916,951 + MPMX20_03714 0.72 -0.3
3,916,951 + MPMX20_03714 0.72 -0.3
3,916,951 + MPMX20_03714 0.72 +0.1
3,916,959 - MPMX20_03714 0.73 -2.5
3,916,959 - MPMX20_03714 0.73 +0.4
3,916,959 - MPMX20_03714 0.73 +2.1
3,916,962 + MPMX20_03714 0.73 -0.4
3,916,970 + MPMX20_03714 0.74 +1.7
3,916,983 - MPMX20_03714 0.75 +0.0
3,916,983 - MPMX20_03714 0.75 +0.7
3,916,993 - MPMX20_03714 0.75 +1.1
3,916,993 - MPMX20_03714 0.75 +0.1
3,916,995 + MPMX20_03714 0.75 -0.6
3,917,005 + MPMX20_03714 0.76 -1.7
3,917,094 + MPMX20_03714 0.82 +0.7
3,917,107 + MPMX20_03714 0.83 -0.2
3,917,107 + MPMX20_03714 0.83 -0.9
3,917,117 - MPMX20_03714 0.84 -0.7
3,917,170 - MPMX20_03714 0.88 +0.2
3,917,205 - -1.3
3,917,224 + +0.9
3,917,241 + +1.7
3,917,250 + +2.2
3,917,297 + +1.1
3,917,317 + +0.1
3,917,318 + -2.4
3,917,318 + +0.9
3,917,327 + -1.2
3,917,395 + +2.7
3,917,463 - +0.7
3,917,582 - +0.1
3,917,589 - +1.1
3,917,623 + -0.1
3,917,635 + +0.8
3,917,643 - +1.1
3,917,680 - -0.1
3,917,688 + +0.4
3,917,688 + -2.6
3,917,688 + +2.1
3,917,690 + +4.9
3,917,693 - +1.9
3,917,696 - +0.8
3,917,698 - -0.4
3,917,698 - -0.4
3,917,750 - MPMX20_03715 0.12 +0.1
3,917,750 - MPMX20_03715 0.12 -0.1
3,917,778 + MPMX20_03715 0.16 +0.7
3,917,786 - MPMX20_03715 0.17 +1.1
3,917,798 + MPMX20_03715 0.19 +0.5
3,917,803 + MPMX20_03715 0.19 -1.1
3,917,808 + MPMX20_03715 0.20 -0.7
3,917,811 - MPMX20_03715 0.20 -0.3
3,917,816 + MPMX20_03715 0.21 -0.1
3,917,816 - MPMX20_03715 0.21 +1.1
3,917,831 + MPMX20_03715 0.23 +0.4
3,917,836 + MPMX20_03715 0.24 -0.7
3,917,839 - MPMX20_03715 0.24 -1.4
3,917,845 + MPMX20_03715 0.25 +1.7
3,917,856 + MPMX20_03715 0.26 -0.5
3,917,869 + MPMX20_03715 0.28 +0.7
3,917,884 - MPMX20_03715 0.30 +2.7
3,917,893 + MPMX20_03715 0.31 +0.7
3,917,897 + MPMX20_03715 0.32 -0.6
3,917,942 + MPMX20_03715 0.38 -0.1
3,917,942 + MPMX20_03715 0.38 -0.3
3,917,955 + MPMX20_03715 0.39 +0.5
3,917,979 + MPMX20_03715 0.42 +1.1
3,917,979 + MPMX20_03715 0.42 -2.3
3,917,979 + MPMX20_03715 0.42 +0.5
3,918,001 + MPMX20_03715 0.45 +1.7
3,918,021 - MPMX20_03715 0.48 -2.2
3,918,041 + MPMX20_03715 0.51 -0.8
3,918,070 - MPMX20_03715 0.54 -0.6
3,918,070 - MPMX20_03715 0.54 -0.9
3,918,083 - MPMX20_03715 0.56 -0.4
3,918,089 + MPMX20_03715 0.57 -0.4
3,918,100 - MPMX20_03715 0.58 +2.7
3,918,135 + MPMX20_03715 0.63 +1.4
3,918,143 - MPMX20_03715 0.64 +0.4
3,918,187 + MPMX20_03715 0.70 +1.7
3,918,187 + MPMX20_03715 0.70 -0.7
3,918,195 + MPMX20_03715 0.71 -2.2
3,918,195 + MPMX20_03715 0.71 -1.0
3,918,195 + MPMX20_03715 0.71 -0.4
3,918,195 - MPMX20_03715 0.71 -1.7
3,918,203 - MPMX20_03715 0.72 +0.0
3,918,203 - MPMX20_03715 0.72 -1.2
3,918,282 - MPMX20_03715 0.82 +0.4
3,918,301 - MPMX20_03715 0.85 -0.7
3,918,301 - MPMX20_03715 0.85 +1.9
3,918,338 + MPMX20_03715 0.90 -0.3
3,918,343 + -1.2
3,918,344 + -1.6
3,918,344 + -1.6
3,918,351 - -0.1
3,918,383 + +0.7
3,918,383 + +0.2
3,918,383 + +2.3
3,918,391 - -0.4
3,918,391 - -0.0
3,918,441 + +0.1
3,918,444 + +3.6
3,918,444 + +1.7
3,918,466 - +2.7
3,918,466 - -2.6
3,918,488 + -1.9
3,918,585 + MPMX20_03716 0.12 +0.1
3,918,593 - MPMX20_03716 0.13 +2.1
3,918,718 + MPMX20_03716 0.28 +0.5
3,918,743 + MPMX20_03716 0.31 -1.7
3,918,751 - MPMX20_03716 0.32 -0.6
3,918,751 - MPMX20_03716 0.32 -1.0
3,918,757 + MPMX20_03716 0.33 -2.2
3,918,762 + MPMX20_03716 0.34 +3.1
3,918,767 + MPMX20_03716 0.34 -1.7
3,918,767 + MPMX20_03716 0.34 +1.1
3,918,770 - MPMX20_03716 0.35 -0.1
3,918,775 - MPMX20_03716 0.35 -1.5
3,918,777 + MPMX20_03716 0.35 +0.7
3,918,777 + MPMX20_03716 0.35 -2.1
3,918,777 + MPMX20_03716 0.35 -1.0
3,918,777 + MPMX20_03716 0.35 -0.5
3,918,777 + MPMX20_03716 0.35 -2.7
3,918,785 - MPMX20_03716 0.36 +1.2
3,918,785 - MPMX20_03716 0.36 +0.1
3,918,785 - MPMX20_03716 0.36 -0.3
3,918,785 - MPMX20_03716 0.36 -0.4
3,918,790 - MPMX20_03716 0.37 +0.7
3,918,796 + MPMX20_03716 0.38 +1.7
3,918,797 - MPMX20_03716 0.38 -3.1
3,918,912 + MPMX20_03716 0.51 +0.4
3,918,914 + MPMX20_03716 0.52 -0.9
3,918,920 - MPMX20_03716 0.52 -3.5
3,918,951 + MPMX20_03716 0.56 +0.9
3,918,964 - MPMX20_03716 0.58 +0.7
3,918,984 + MPMX20_03716 0.60 -0.9
3,919,000 - MPMX20_03716 0.62 -0.4
3,919,028 + MPMX20_03716 0.65 +0.4
3,919,028 + MPMX20_03716 0.65 +0.4
3,919,080 - MPMX20_03716 0.72 -0.4
3,919,126 + MPMX20_03716 0.77 -1.1
3,919,127 - MPMX20_03716 0.77 -1.6
3,919,151 - MPMX20_03716 0.80 +1.1
3,919,157 - MPMX20_03716 0.81 -1.6
3,919,163 + MPMX20_03716 0.81 +2.7
3,919,164 + MPMX20_03716 0.82 +0.1
3,919,164 + MPMX20_03716 0.82 -0.1
3,919,172 - MPMX20_03716 0.83 -1.2
3,919,198 + MPMX20_03716 0.86 +1.9
3,919,198 + MPMX20_03716 0.86 +0.1
3,919,198 + MPMX20_03716 0.86 -0.1
3,919,198 + MPMX20_03716 0.86 -1.8
3,919,198 + MPMX20_03716 0.86 -0.9
3,919,198 + MPMX20_03716 0.86 -1.2
3,919,198 + MPMX20_03716 0.86 -0.7
3,919,198 + MPMX20_03716 0.86 -0.7
3,919,199 + MPMX20_03716 0.86 +0.1
3,919,206 - MPMX20_03716 0.87 +0.4
3,919,206 - MPMX20_03716 0.87 -0.2
3,919,206 - MPMX20_03716 0.87 -4.0
3,919,207 - MPMX20_03716 0.87 -0.9
3,919,208 + MPMX20_03716 0.87 -0.3
3,919,216 - MPMX20_03716 0.88 -1.1
3,919,216 - MPMX20_03716 0.88 -0.6
3,919,223 + MPMX20_03716 0.89 -0.2
3,919,231 + MPMX20_03716 0.90 +4.3
3,919,231 - MPMX20_03716 0.90 +0.2
3,919,239 - -1.6
3,919,260 + +1.7
3,919,260 + +0.1
3,919,260 + -2.2
3,919,268 + -0.5
3,919,268 - +0.1
3,919,268 - +3.1
3,919,268 - +0.7
3,919,276 - +2.7
3,919,277 + -1.0
3,919,277 + +1.7
3,919,285 - -1.6
3,919,292 + -1.0
3,919,292 + -0.5
3,919,292 + +0.1
3,919,299 + +1.1
3,919,300 + -2.0
3,919,323 + -0.6
3,919,333 + -0.5
3,919,387 + +1.7
3,919,390 + -1.3
3,919,390 + +1.1
3,919,391 + +1.4
3,919,392 + +2.7
3,919,392 + -0.4
3,919,392 + +0.5
3,919,392 + +0.1
3,919,392 + -0.9
3,919,392 + +0.7
3,919,392 + +1.0
3,919,392 + +2.1
3,919,392 + -1.7
3,919,392 + +0.5
3,919,392 + -3.9
3,919,392 + -0.7
3,919,392 + -0.4
3,919,392 + +0.4
3,919,392 + +0.6
3,919,392 + -1.4
3,919,392 + -0.9
3,919,392 + +4.3
3,919,392 + +0.3
3,919,392 + -2.7
3,919,392 + -0.3
3,919,392 + -1.8
3,919,392 + -2.8
3,919,392 + -1.2
3,919,392 + +0.2
3,919,392 + +0.7
3,919,392 + -2.7
3,919,392 + +1.7
3,919,392 + -0.2
3,919,392 + -2.6
3,919,392 + +1.4
3,919,392 + -0.9
3,919,392 + -1.5
3,919,392 + +1.1
3,919,392 + -1.0
3,919,392 + +2.7
3,919,392 + -0.6
3,919,392 + -1.1
3,919,392 + -0.6
3,919,399 - +0.1
3,919,400 - +0.4
3,919,400 - -1.4
3,919,400 - -0.3
3,919,400 - -0.6
3,919,400 - +1.1
3,919,400 - -0.9
3,919,400 - +1.1
3,919,400 - -0.1
3,919,400 - +1.7
3,919,400 - +0.4

Or see this region's nucleotide sequence