Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03041

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03039 and MPMX20_03040 overlap by 4 nucleotidesMPMX20_03040 and MPMX20_03041 overlap by 1 nucleotidesMPMX20_03041 and MPMX20_03042 are separated by 22 nucleotides MPMX20_03039: MPMX20_03039 - hypothetical protein, at 3,176,783 to 3,178,000 _03039 MPMX20_03040: MPMX20_03040 - Serine acetyltransferase, at 3,177,997 to 3,178,488 _03040 MPMX20_03041: MPMX20_03041 - hypothetical protein, at 3,178,488 to 3,179,330 _03041 MPMX20_03042: MPMX20_03042 - Tyrosine-protein kinase wzc, at 3,179,353 to 3,181,515 _03042 Position (kb) 3178 3179 3180Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 3177.517 kb on + strand, within MPMX20_03039at 3177.525 kb on - strand, within MPMX20_03039at 3177.525 kb on - strand, within MPMX20_03039at 3177.582 kb on + strand, within MPMX20_03039at 3177.667 kb on + strand, within MPMX20_03039at 3177.686 kb on + strand, within MPMX20_03039at 3177.694 kb on - strand, within MPMX20_03039at 3177.767 kb on - strand, within MPMX20_03039at 3177.774 kb on + strand, within MPMX20_03039at 3177.774 kb on + strand, within MPMX20_03039at 3177.788 kb on + strand, within MPMX20_03039at 3177.931 kb on + strandat 3177.931 kb on + strandat 3177.939 kb on - strandat 3177.939 kb on - strandat 3177.939 kb on - strandat 3177.951 kb on - strandat 3178.028 kb on + strandat 3178.036 kb on - strandat 3178.057 kb on + strand, within MPMX20_03040at 3178.057 kb on + strand, within MPMX20_03040at 3178.065 kb on - strand, within MPMX20_03040at 3178.076 kb on - strand, within MPMX20_03040at 3178.108 kb on - strand, within MPMX20_03040at 3178.127 kb on + strand, within MPMX20_03040at 3178.133 kb on - strand, within MPMX20_03040at 3178.145 kb on - strand, within MPMX20_03040at 3178.168 kb on - strand, within MPMX20_03040at 3178.173 kb on - strand, within MPMX20_03040at 3178.173 kb on - strand, within MPMX20_03040at 3178.178 kb on + strand, within MPMX20_03040at 3178.264 kb on - strand, within MPMX20_03040at 3178.264 kb on - strand, within MPMX20_03040at 3178.269 kb on - strand, within MPMX20_03040at 3178.342 kb on + strand, within MPMX20_03040at 3178.372 kb on - strand, within MPMX20_03040at 3178.426 kb on + strand, within MPMX20_03040at 3178.446 kb on + strandat 3178.452 kb on + strandat 3178.452 kb on + strandat 3178.452 kb on + strandat 3178.452 kb on + strandat 3178.462 kb on - strandat 3178.510 kb on + strandat 3178.550 kb on + strandat 3178.578 kb on + strand, within MPMX20_03041at 3178.755 kb on + strand, within MPMX20_03041at 3178.788 kb on - strand, within MPMX20_03041at 3178.803 kb on - strand, within MPMX20_03041at 3178.803 kb on - strand, within MPMX20_03041at 3178.807 kb on + strand, within MPMX20_03041at 3178.823 kb on + strand, within MPMX20_03041at 3178.831 kb on - strand, within MPMX20_03041at 3178.843 kb on + strand, within MPMX20_03041at 3178.856 kb on - strand, within MPMX20_03041at 3178.999 kb on - strand, within MPMX20_03041at 3179.058 kb on + strand, within MPMX20_03041at 3179.059 kb on + strand, within MPMX20_03041at 3179.071 kb on + strand, within MPMX20_03041at 3179.071 kb on + strand, within MPMX20_03041at 3179.071 kb on + strand, within MPMX20_03041at 3179.079 kb on - strand, within MPMX20_03041at 3179.079 kb on - strand, within MPMX20_03041at 3179.094 kb on + strand, within MPMX20_03041at 3179.102 kb on - strand, within MPMX20_03041at 3179.102 kb on - strand, within MPMX20_03041at 3179.132 kb on - strand, within MPMX20_03041at 3179.200 kb on - strand, within MPMX20_03041at 3179.202 kb on + strand, within MPMX20_03041at 3179.202 kb on + strand, within MPMX20_03041at 3179.204 kb on + strand, within MPMX20_03041at 3179.230 kb on + strand, within MPMX20_03041at 3179.316 kb on + strandat 3179.326 kb on + strandat 3179.326 kb on + strandat 3179.326 kb on + strandat 3179.334 kb on - strandat 3179.334 kb on - strandat 3179.334 kb on - strandat 3179.334 kb on - strandat 3179.348 kb on + strandat 3179.360 kb on + strandat 3179.360 kb on - strandat 3179.433 kb on + strandat 3179.481 kb on - strandat 3179.490 kb on - strandat 3179.626 kb on + strand, within MPMX20_03042at 3179.626 kb on + strand, within MPMX20_03042at 3179.663 kb on + strand, within MPMX20_03042at 3179.688 kb on - strand, within MPMX20_03042at 3179.693 kb on - strand, within MPMX20_03042at 3179.744 kb on - strand, within MPMX20_03042at 3179.747 kb on + strand, within MPMX20_03042at 3179.789 kb on + strand, within MPMX20_03042at 3179.797 kb on - strand, within MPMX20_03042at 3179.806 kb on + strand, within MPMX20_03042at 3179.806 kb on + strand, within MPMX20_03042at 3179.807 kb on + strand, within MPMX20_03042at 3179.807 kb on + strand, within MPMX20_03042at 3179.807 kb on + strand, within MPMX20_03042at 3179.813 kb on + strand, within MPMX20_03042at 3179.815 kb on - strand, within MPMX20_03042at 3179.823 kb on + strand, within MPMX20_03042at 3179.823 kb on + strand, within MPMX20_03042at 3179.831 kb on - strand, within MPMX20_03042at 3179.875 kb on - strand, within MPMX20_03042at 3179.885 kb on - strand, within MPMX20_03042at 3179.887 kb on + strand, within MPMX20_03042at 3179.915 kb on + strand, within MPMX20_03042at 3179.934 kb on - strand, within MPMX20_03042at 3180.006 kb on - strand, within MPMX20_03042at 3180.113 kb on + strand, within MPMX20_03042at 3180.128 kb on - strand, within MPMX20_03042at 3180.164 kb on + strand, within MPMX20_03042at 3180.224 kb on - strand, within MPMX20_03042at 3180.224 kb on - strand, within MPMX20_03042at 3180.234 kb on - strand, within MPMX20_03042at 3180.243 kb on - strand, within MPMX20_03042at 3180.260 kb on + strand, within MPMX20_03042at 3180.261 kb on + strand, within MPMX20_03042at 3180.282 kb on + strand, within MPMX20_03042at 3180.282 kb on + strand, within MPMX20_03042at 3180.299 kb on + strand, within MPMX20_03042at 3180.308 kb on + strand, within MPMX20_03042at 3180.308 kb on + strand, within MPMX20_03042at 3180.308 kb on + strand, within MPMX20_03042

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,177,517 + MPMX20_03039 0.60 -0.3
3,177,525 - MPMX20_03039 0.61 -0.9
3,177,525 - MPMX20_03039 0.61 +0.5
3,177,582 + MPMX20_03039 0.66 -2.2
3,177,667 + MPMX20_03039 0.73 +1.0
3,177,686 + MPMX20_03039 0.74 -0.5
3,177,694 - MPMX20_03039 0.75 +1.1
3,177,767 - MPMX20_03039 0.81 -2.1
3,177,774 + MPMX20_03039 0.81 -1.6
3,177,774 + MPMX20_03039 0.81 -1.0
3,177,788 + MPMX20_03039 0.83 -0.6
3,177,931 + -0.6
3,177,931 + +1.7
3,177,939 - +0.1
3,177,939 - +1.1
3,177,939 - -0.6
3,177,951 - +0.5
3,178,028 + +1.8
3,178,036 - -0.1
3,178,057 + MPMX20_03040 0.12 +0.1
3,178,057 + MPMX20_03040 0.12 -0.9
3,178,065 - MPMX20_03040 0.14 +0.4
3,178,076 - MPMX20_03040 0.16 +0.3
3,178,108 - MPMX20_03040 0.23 -0.0
3,178,127 + MPMX20_03040 0.26 -1.6
3,178,133 - MPMX20_03040 0.28 +1.1
3,178,145 - MPMX20_03040 0.30 -0.6
3,178,168 - MPMX20_03040 0.35 +0.4
3,178,173 - MPMX20_03040 0.36 +1.0
3,178,173 - MPMX20_03040 0.36 -0.5
3,178,178 + MPMX20_03040 0.37 -2.3
3,178,264 - MPMX20_03040 0.54 -1.0
3,178,264 - MPMX20_03040 0.54 -0.9
3,178,269 - MPMX20_03040 0.55 -2.1
3,178,342 + MPMX20_03040 0.70 +2.0
3,178,372 - MPMX20_03040 0.76 -1.6
3,178,426 + MPMX20_03040 0.87 +0.1
3,178,446 + -0.3
3,178,452 + -1.3
3,178,452 + -0.5
3,178,452 + +1.7
3,178,452 + -1.8
3,178,462 - +3.3
3,178,510 + -0.1
3,178,550 + -1.1
3,178,578 + MPMX20_03041 0.11 +4.9
3,178,755 + MPMX20_03041 0.32 +2.7
3,178,788 - MPMX20_03041 0.36 -2.5
3,178,803 - MPMX20_03041 0.37 -3.1
3,178,803 - MPMX20_03041 0.37 -1.1
3,178,807 + MPMX20_03041 0.38 -0.9
3,178,823 + MPMX20_03041 0.40 +1.3
3,178,831 - MPMX20_03041 0.41 +2.7
3,178,843 + MPMX20_03041 0.42 -0.4
3,178,856 - MPMX20_03041 0.44 -3.2
3,178,999 - MPMX20_03041 0.61 -2.4
3,179,058 + MPMX20_03041 0.68 -2.2
3,179,059 + MPMX20_03041 0.68 +0.1
3,179,071 + MPMX20_03041 0.69 +1.4
3,179,071 + MPMX20_03041 0.69 -1.0
3,179,071 + MPMX20_03041 0.69 -0.2
3,179,079 - MPMX20_03041 0.70 -0.1
3,179,079 - MPMX20_03041 0.70 +0.9
3,179,094 + MPMX20_03041 0.72 +1.7
3,179,102 - MPMX20_03041 0.73 +1.6
3,179,102 - MPMX20_03041 0.73 +0.1
3,179,132 - MPMX20_03041 0.76 -0.8
3,179,200 - MPMX20_03041 0.84 +0.1
3,179,202 + MPMX20_03041 0.85 +0.4
3,179,202 + MPMX20_03041 0.85 +1.7
3,179,204 + MPMX20_03041 0.85 -0.8
3,179,230 + MPMX20_03041 0.88 +1.1
3,179,316 + +2.7
3,179,326 + -3.0
3,179,326 + -0.1
3,179,326 + -1.8
3,179,334 - +1.0
3,179,334 - +1.6
3,179,334 - +0.9
3,179,334 - +0.1
3,179,348 + -3.1
3,179,360 + +1.5
3,179,360 - -0.4
3,179,433 + -1.8
3,179,481 - -0.1
3,179,490 - +0.4
3,179,626 + MPMX20_03042 0.13 -1.2
3,179,626 + MPMX20_03042 0.13 +1.7
3,179,663 + MPMX20_03042 0.14 +0.9
3,179,688 - MPMX20_03042 0.15 -0.5
3,179,693 - MPMX20_03042 0.16 -1.2
3,179,744 - MPMX20_03042 0.18 +0.9
3,179,747 + MPMX20_03042 0.18 -0.5
3,179,789 + MPMX20_03042 0.20 +1.4
3,179,797 - MPMX20_03042 0.21 -1.2
3,179,806 + MPMX20_03042 0.21 -1.8
3,179,806 + MPMX20_03042 0.21 -0.3
3,179,807 + MPMX20_03042 0.21 +0.9
3,179,807 + MPMX20_03042 0.21 +1.1
3,179,807 + MPMX20_03042 0.21 +0.8
3,179,813 + MPMX20_03042 0.21 +4.0
3,179,815 - MPMX20_03042 0.21 +0.1
3,179,823 + MPMX20_03042 0.22 +0.4
3,179,823 + MPMX20_03042 0.22 -0.8
3,179,831 - MPMX20_03042 0.22 +3.7
3,179,875 - MPMX20_03042 0.24 +3.7
3,179,885 - MPMX20_03042 0.25 -1.2
3,179,887 + MPMX20_03042 0.25 +2.4
3,179,915 + MPMX20_03042 0.26 -1.5
3,179,934 - MPMX20_03042 0.27 -0.1
3,180,006 - MPMX20_03042 0.30 +0.4
3,180,113 + MPMX20_03042 0.35 -1.6
3,180,128 - MPMX20_03042 0.36 -0.2
3,180,164 + MPMX20_03042 0.37 -0.1
3,180,224 - MPMX20_03042 0.40 +0.7
3,180,224 - MPMX20_03042 0.40 +0.4
3,180,234 - MPMX20_03042 0.41 -0.1
3,180,243 - MPMX20_03042 0.41 -2.4
3,180,260 + MPMX20_03042 0.42 +1.0
3,180,261 + MPMX20_03042 0.42 +1.0
3,180,282 + MPMX20_03042 0.43 +1.4
3,180,282 + MPMX20_03042 0.43 -1.4
3,180,299 + MPMX20_03042 0.44 +0.9
3,180,308 + MPMX20_03042 0.44 -0.4
3,180,308 + MPMX20_03042 0.44 +0.1
3,180,308 + MPMX20_03042 0.44 +0.7

Or see this region's nucleotide sequence