Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02441

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02440 and MPMX20_02441 are separated by 50 nucleotidesMPMX20_02441 and MPMX20_02442 are separated by 27 nucleotidesMPMX20_02442 and MPMX20_02443 are separated by 274 nucleotides MPMX20_02440: MPMX20_02440 - tRNA-cytidine(32) 2-sulfurtransferase, at 2,576,326 to 2,577,261 _02440 MPMX20_02441: MPMX20_02441 - ATP-dependent RNA helicase DbpA, at 2,577,312 to 2,578,685 _02441 MPMX20_02442: MPMX20_02442 - hypothetical protein, at 2,578,713 to 2,578,895 _02442 MPMX20_02443: MPMX20_02443 - Zinc transport protein ZntB, at 2,579,170 to 2,580,153 _02443 Position (kb) 2577 2578 2579Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10 11 12at 2576.377 kb on + strandat 2576.377 kb on + strandat 2576.385 kb on - strandat 2576.385 kb on - strandat 2576.385 kb on - strandat 2576.386 kb on + strandat 2576.404 kb on + strandat 2576.486 kb on - strand, within MPMX20_02440at 2576.486 kb on - strand, within MPMX20_02440at 2576.486 kb on - strand, within MPMX20_02440at 2576.488 kb on + strand, within MPMX20_02440at 2576.496 kb on - strand, within MPMX20_02440at 2576.515 kb on - strand, within MPMX20_02440at 2576.541 kb on + strand, within MPMX20_02440at 2576.699 kb on + strand, within MPMX20_02440at 2576.699 kb on + strand, within MPMX20_02440at 2576.699 kb on + strand, within MPMX20_02440at 2576.704 kb on + strand, within MPMX20_02440at 2576.743 kb on - strand, within MPMX20_02440at 2576.826 kb on + strand, within MPMX20_02440at 2576.834 kb on - strand, within MPMX20_02440at 2576.879 kb on - strand, within MPMX20_02440at 2576.928 kb on + strand, within MPMX20_02440at 2576.928 kb on + strand, within MPMX20_02440at 2576.936 kb on - strand, within MPMX20_02440at 2576.936 kb on - strand, within MPMX20_02440at 2576.951 kb on + strand, within MPMX20_02440at 2576.951 kb on + strand, within MPMX20_02440at 2577.051 kb on + strand, within MPMX20_02440at 2577.230 kb on - strandat 2577.288 kb on - strandat 2577.293 kb on + strandat 2577.423 kb on - strandat 2577.427 kb on + strandat 2577.435 kb on - strandat 2577.531 kb on - strand, within MPMX20_02441at 2577.575 kb on - strand, within MPMX20_02441at 2577.595 kb on + strand, within MPMX20_02441at 2577.595 kb on + strand, within MPMX20_02441at 2577.689 kb on + strand, within MPMX20_02441at 2577.710 kb on + strand, within MPMX20_02441at 2577.760 kb on - strand, within MPMX20_02441at 2577.885 kb on + strand, within MPMX20_02441at 2577.890 kb on + strand, within MPMX20_02441at 2577.890 kb on + strand, within MPMX20_02441at 2577.890 kb on + strand, within MPMX20_02441at 2577.890 kb on + strand, within MPMX20_02441at 2577.891 kb on - strand, within MPMX20_02441at 2577.893 kb on - strand, within MPMX20_02441at 2577.898 kb on - strand, within MPMX20_02441at 2577.898 kb on - strand, within MPMX20_02441at 2577.915 kb on - strand, within MPMX20_02441at 2577.968 kb on + strand, within MPMX20_02441at 2577.972 kb on - strand, within MPMX20_02441at 2578.060 kb on - strand, within MPMX20_02441at 2578.118 kb on + strand, within MPMX20_02441at 2578.118 kb on + strand, within MPMX20_02441at 2578.123 kb on + strand, within MPMX20_02441at 2578.126 kb on - strand, within MPMX20_02441at 2578.126 kb on - strand, within MPMX20_02441at 2578.209 kb on - strand, within MPMX20_02441at 2578.228 kb on + strand, within MPMX20_02441at 2578.236 kb on - strand, within MPMX20_02441at 2578.465 kb on - strand, within MPMX20_02441at 2578.479 kb on - strand, within MPMX20_02441at 2578.548 kb on - strandat 2578.567 kb on - strandat 2578.704 kb on + strandat 2578.720 kb on + strandat 2578.728 kb on - strandat 2578.784 kb on + strand, within MPMX20_02442at 2578.797 kb on - strand, within MPMX20_02442at 2578.797 kb on - strand, within MPMX20_02442at 2578.797 kb on - strand, within MPMX20_02442at 2578.816 kb on - strand, within MPMX20_02442at 2578.846 kb on + strand, within MPMX20_02442at 2578.855 kb on - strand, within MPMX20_02442at 2578.856 kb on + strand, within MPMX20_02442at 2578.856 kb on + strand, within MPMX20_02442at 2578.882 kb on + strandat 2578.931 kb on - strandat 2578.969 kb on + strandat 2578.977 kb on - strandat 2578.997 kb on - strandat 2579.005 kb on - strandat 2579.022 kb on + strandat 2579.032 kb on + strandat 2579.037 kb on - strandat 2579.063 kb on + strandat 2579.063 kb on + strandat 2579.063 kb on + strandat 2579.063 kb on + strandat 2579.071 kb on - strandat 2579.071 kb on - strandat 2579.105 kb on - strandat 2579.247 kb on + strandat 2579.247 kb on + strandat 2579.255 kb on - strandat 2579.255 kb on - strandat 2579.256 kb on - strandat 2579.264 kb on - strandat 2579.285 kb on - strand, within MPMX20_02443at 2579.291 kb on - strand, within MPMX20_02443at 2579.293 kb on + strand, within MPMX20_02443at 2579.301 kb on - strand, within MPMX20_02443at 2579.307 kb on + strand, within MPMX20_02443at 2579.346 kb on + strand, within MPMX20_02443at 2579.375 kb on + strand, within MPMX20_02443at 2579.458 kb on + strand, within MPMX20_02443at 2579.526 kb on - strand, within MPMX20_02443at 2579.575 kb on - strand, within MPMX20_02443at 2579.640 kb on - strand, within MPMX20_02443

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,576,377 + +0.7
2,576,377 + -2.0
2,576,385 - +1.3
2,576,385 - +0.7
2,576,385 - +0.7
2,576,386 + +2.7
2,576,404 + -0.2
2,576,486 - MPMX20_02440 0.17 -1.3
2,576,486 - MPMX20_02440 0.17 -2.9
2,576,486 - MPMX20_02440 0.17 +1.7
2,576,488 + MPMX20_02440 0.17 +2.7
2,576,496 - MPMX20_02440 0.18 +0.0
2,576,515 - MPMX20_02440 0.20 -1.6
2,576,541 + MPMX20_02440 0.23 -1.3
2,576,699 + MPMX20_02440 0.40 +0.5
2,576,699 + MPMX20_02440 0.40 -1.5
2,576,699 + MPMX20_02440 0.40 +2.3
2,576,704 + MPMX20_02440 0.40 +2.3
2,576,743 - MPMX20_02440 0.45 +1.7
2,576,826 + MPMX20_02440 0.53 -0.8
2,576,834 - MPMX20_02440 0.54 -1.3
2,576,879 - MPMX20_02440 0.59 +0.7
2,576,928 + MPMX20_02440 0.64 -0.5
2,576,928 + MPMX20_02440 0.64 -1.8
2,576,936 - MPMX20_02440 0.65 +1.1
2,576,936 - MPMX20_02440 0.65 -0.3
2,576,951 + MPMX20_02440 0.67 -0.5
2,576,951 + MPMX20_02440 0.67 -1.8
2,577,051 + MPMX20_02440 0.77 +0.8
2,577,230 - -2.1
2,577,288 - -2.4
2,577,293 + +0.4
2,577,423 - -1.4
2,577,427 + +1.6
2,577,435 - -0.3
2,577,531 - MPMX20_02441 0.16 -0.1
2,577,575 - MPMX20_02441 0.19 -0.6
2,577,595 + MPMX20_02441 0.21 +0.1
2,577,595 + MPMX20_02441 0.21 +1.1
2,577,689 + MPMX20_02441 0.27 +1.6
2,577,710 + MPMX20_02441 0.29 -0.2
2,577,760 - MPMX20_02441 0.33 -0.6
2,577,885 + MPMX20_02441 0.42 -0.6
2,577,890 + MPMX20_02441 0.42 +1.9
2,577,890 + MPMX20_02441 0.42 +2.5
2,577,890 + MPMX20_02441 0.42 -2.9
2,577,890 + MPMX20_02441 0.42 +1.3
2,577,891 - MPMX20_02441 0.42 +0.1
2,577,893 - MPMX20_02441 0.42 +0.3
2,577,898 - MPMX20_02441 0.43 -0.7
2,577,898 - MPMX20_02441 0.43 -2.9
2,577,915 - MPMX20_02441 0.44 -1.4
2,577,968 + MPMX20_02441 0.48 +1.1
2,577,972 - MPMX20_02441 0.48 +0.8
2,578,060 - MPMX20_02441 0.54 +0.4
2,578,118 + MPMX20_02441 0.59 +12.6
2,578,118 + MPMX20_02441 0.59 -0.2
2,578,123 + MPMX20_02441 0.59 -0.3
2,578,126 - MPMX20_02441 0.59 -1.2
2,578,126 - MPMX20_02441 0.59 +0.7
2,578,209 - MPMX20_02441 0.65 -1.9
2,578,228 + MPMX20_02441 0.67 -0.9
2,578,236 - MPMX20_02441 0.67 -1.2
2,578,465 - MPMX20_02441 0.84 -1.6
2,578,479 - MPMX20_02441 0.85 -1.1
2,578,548 - -1.1
2,578,567 - -1.3
2,578,704 + -1.1
2,578,720 + +0.9
2,578,728 - -0.1
2,578,784 + MPMX20_02442 0.39 +1.1
2,578,797 - MPMX20_02442 0.46 +0.4
2,578,797 - MPMX20_02442 0.46 -1.3
2,578,797 - MPMX20_02442 0.46 -0.6
2,578,816 - MPMX20_02442 0.56 -0.6
2,578,846 + MPMX20_02442 0.73 +0.9
2,578,855 - MPMX20_02442 0.78 -1.0
2,578,856 + MPMX20_02442 0.78 +0.4
2,578,856 + MPMX20_02442 0.78 +0.7
2,578,882 + -0.6
2,578,931 - +2.0
2,578,969 + +0.3
2,578,977 - +1.2
2,578,997 - -0.2
2,579,005 - -2.7
2,579,022 + +0.4
2,579,032 + +0.1
2,579,037 - -1.8
2,579,063 + -2.1
2,579,063 + +1.1
2,579,063 + -2.1
2,579,063 + +2.6
2,579,071 - +1.2
2,579,071 - -0.6
2,579,105 - -1.6
2,579,247 + -1.0
2,579,247 + +1.6
2,579,255 - -0.7
2,579,255 - +0.5
2,579,256 - -0.1
2,579,264 - +0.9
2,579,285 - MPMX20_02443 0.12 +0.4
2,579,291 - MPMX20_02443 0.12 -0.4
2,579,293 + MPMX20_02443 0.12 +1.5
2,579,301 - MPMX20_02443 0.13 -2.5
2,579,307 + MPMX20_02443 0.14 -1.5
2,579,346 + MPMX20_02443 0.18 +1.1
2,579,375 + MPMX20_02443 0.21 +0.4
2,579,458 + MPMX20_02443 0.29 +0.2
2,579,526 - MPMX20_02443 0.36 -0.7
2,579,575 - MPMX20_02443 0.41 +1.3
2,579,640 - MPMX20_02443 0.48 -1.6

Or see this region's nucleotide sequence