Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01800

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01799 and MPMX20_01800 are separated by 54 nucleotidesMPMX20_01800 and MPMX20_01801 are separated by 14 nucleotidesMPMX20_01801 and MPMX20_01802 are separated by 46 nucleotides MPMX20_01799: MPMX20_01799 - Lipoprotein-releasing system transmembrane protein LolE, at 1,892,271 to 1,893,515 _01799 MPMX20_01800: MPMX20_01800 - N-acetyl-D-glucosamine kinase, at 1,893,570 to 1,894,481 _01800 MPMX20_01801: MPMX20_01801 - NAD-dependent protein deacylase, at 1,894,496 to 1,895,317 _01801 MPMX20_01802: MPMX20_01802 - hypothetical protein, at 1,895,364 to 1,897,295 _01802 Position (kb) 1893 1894 1895Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1893.601 kb on + strandat 1893.735 kb on + strand, within MPMX20_01800at 1893.743 kb on - strand, within MPMX20_01800at 1893.786 kb on + strand, within MPMX20_01800at 1893.842 kb on + strand, within MPMX20_01800at 1893.854 kb on + strand, within MPMX20_01800at 1893.862 kb on - strand, within MPMX20_01800at 1893.902 kb on + strand, within MPMX20_01800at 1893.966 kb on + strand, within MPMX20_01800at 1893.974 kb on - strand, within MPMX20_01800at 1893.974 kb on - strand, within MPMX20_01800at 1894.013 kb on + strand, within MPMX20_01800at 1894.019 kb on + strand, within MPMX20_01800at 1894.086 kb on + strand, within MPMX20_01800at 1894.089 kb on - strand, within MPMX20_01800at 1894.110 kb on + strand, within MPMX20_01800at 1894.255 kb on + strand, within MPMX20_01800at 1894.263 kb on - strand, within MPMX20_01800at 1894.362 kb on - strand, within MPMX20_01800at 1894.446 kb on - strandat 1894.498 kb on - strandat 1894.509 kb on + strandat 1894.514 kb on + strandat 1894.615 kb on + strand, within MPMX20_01801at 1894.623 kb on - strand, within MPMX20_01801at 1894.708 kb on - strand, within MPMX20_01801at 1894.805 kb on - strand, within MPMX20_01801at 1894.810 kb on + strand, within MPMX20_01801at 1895.002 kb on + strand, within MPMX20_01801at 1895.092 kb on + strand, within MPMX20_01801at 1895.092 kb on + strand, within MPMX20_01801at 1895.100 kb on - strand, within MPMX20_01801at 1895.107 kb on + strand, within MPMX20_01801at 1895.110 kb on - strand, within MPMX20_01801at 1895.144 kb on + strand, within MPMX20_01801at 1895.157 kb on - strand, within MPMX20_01801at 1895.210 kb on - strand, within MPMX20_01801at 1895.261 kb on + strandat 1895.266 kb on + strandat 1895.266 kb on + strandat 1895.266 kb on + strandat 1895.269 kb on - strandat 1895.269 kb on - strandat 1895.269 kb on - strandat 1895.269 kb on - strandat 1895.274 kb on - strandat 1895.299 kb on + strandat 1895.316 kb on + strandat 1895.436 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,893,601 + +1.2
1,893,735 + MPMX20_01800 0.18 -0.3
1,893,743 - MPMX20_01800 0.19 +1.8
1,893,786 + MPMX20_01800 0.24 -2.4
1,893,842 + MPMX20_01800 0.30 -0.5
1,893,854 + MPMX20_01800 0.31 +1.7
1,893,862 - MPMX20_01800 0.32 -1.6
1,893,902 + MPMX20_01800 0.36 -1.5
1,893,966 + MPMX20_01800 0.43 +0.5
1,893,974 - MPMX20_01800 0.44 +0.6
1,893,974 - MPMX20_01800 0.44 -2.0
1,894,013 + MPMX20_01800 0.49 -1.8
1,894,019 + MPMX20_01800 0.49 +0.6
1,894,086 + MPMX20_01800 0.57 -0.2
1,894,089 - MPMX20_01800 0.57 -0.9
1,894,110 + MPMX20_01800 0.59 -0.9
1,894,255 + MPMX20_01800 0.75 -0.6
1,894,263 - MPMX20_01800 0.76 -0.2
1,894,362 - MPMX20_01800 0.87 -1.1
1,894,446 - -0.2
1,894,498 - -1.3
1,894,509 + -0.2
1,894,514 + -2.7
1,894,615 + MPMX20_01801 0.14 -1.7
1,894,623 - MPMX20_01801 0.15 -0.3
1,894,708 - MPMX20_01801 0.26 +4.6
1,894,805 - MPMX20_01801 0.38 -1.1
1,894,810 + MPMX20_01801 0.38 +2.8
1,895,002 + MPMX20_01801 0.62 -0.5
1,895,092 + MPMX20_01801 0.73 -0.4
1,895,092 + MPMX20_01801 0.73 +0.2
1,895,100 - MPMX20_01801 0.73 +0.4
1,895,107 + MPMX20_01801 0.74 -0.3
1,895,110 - MPMX20_01801 0.75 +0.8
1,895,144 + MPMX20_01801 0.79 +0.6
1,895,157 - MPMX20_01801 0.80 -2.6
1,895,210 - MPMX20_01801 0.87 -1.4
1,895,261 + -1.2
1,895,266 + -0.8
1,895,266 + +1.7
1,895,266 + -1.6
1,895,269 - -1.8
1,895,269 - -1.9
1,895,269 - -0.2
1,895,269 - -0.1
1,895,274 - -0.9
1,895,299 + +0.6
1,895,316 + -0.6
1,895,436 + -1.5

Or see this region's nucleotide sequence