Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01407 and MPMX20_01408 are separated by 751 nucleotides MPMX20_01408 and MPMX20_01409 are separated by 86 nucleotides
MPMX20_01407: MPMX20_01407 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 1,470,228 to 1,470,950
_01407
MPMX20_01408: MPMX20_01408 - UvrABC system protein B, at 1,471,702 to 1,473,717
_01408
MPMX20_01409: MPMX20_01409 - Putative gluconeogenesis factor, at 1,473,804 to 1,474,712
_01409
Position (kb)
1471
1472
1473
1474 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 1470.722 kb on + strand, within MPMX20_01407 at 1470.870 kb on - strand, within MPMX20_01407 at 1470.959 kb on + strand at 1470.983 kb on - strand at 1471.123 kb on - strand at 1471.287 kb on + strand at 1471.319 kb on - strand at 1471.361 kb on - strand at 1471.462 kb on - strand at 1471.520 kb on - strand at 1471.703 kb on + strand at 1471.845 kb on - strand at 1471.892 kb on - strand at 1471.893 kb on - strand at 1471.917 kb on + strand, within MPMX20_01408 at 1471.917 kb on + strand, within MPMX20_01408 at 1471.917 kb on + strand, within MPMX20_01408 at 1471.917 kb on + strand, within MPMX20_01408 at 1471.925 kb on - strand, within MPMX20_01408 at 1471.925 kb on - strand, within MPMX20_01408 at 1471.925 kb on - strand, within MPMX20_01408 at 1471.990 kb on - strand, within MPMX20_01408 at 1472.013 kb on - strand, within MPMX20_01408 at 1472.215 kb on + strand, within MPMX20_01408 at 1472.223 kb on - strand, within MPMX20_01408 at 1472.233 kb on - strand, within MPMX20_01408 at 1472.370 kb on - strand, within MPMX20_01408 at 1472.426 kb on - strand, within MPMX20_01408 at 1472.426 kb on - strand, within MPMX20_01408 at 1472.426 kb on - strand, within MPMX20_01408 at 1472.447 kb on + strand, within MPMX20_01408 at 1472.447 kb on + strand, within MPMX20_01408 at 1472.487 kb on + strand, within MPMX20_01408 at 1472.495 kb on - strand, within MPMX20_01408 at 1472.510 kb on + strand, within MPMX20_01408 at 1472.518 kb on - strand, within MPMX20_01408 at 1472.563 kb on - strand, within MPMX20_01408 at 1472.645 kb on + strand, within MPMX20_01408 at 1472.761 kb on + strand, within MPMX20_01408 at 1472.817 kb on + strand, within MPMX20_01408 at 1472.992 kb on - strand, within MPMX20_01408 at 1472.994 kb on + strand, within MPMX20_01408 at 1473.095 kb on + strand, within MPMX20_01408 at 1473.095 kb on + strand, within MPMX20_01408 at 1473.095 kb on + strand, within MPMX20_01408 at 1473.206 kb on + strand, within MPMX20_01408 at 1473.206 kb on + strand, within MPMX20_01408 at 1473.209 kb on - strand, within MPMX20_01408 at 1473.214 kb on - strand, within MPMX20_01408 at 1473.226 kb on + strand, within MPMX20_01408 at 1473.226 kb on + strand, within MPMX20_01408 at 1473.226 kb on + strand, within MPMX20_01408 at 1473.226 kb on + strand, within MPMX20_01408 at 1473.234 kb on - strand, within MPMX20_01408 at 1473.236 kb on + strand, within MPMX20_01408 at 1473.307 kb on + strand, within MPMX20_01408 at 1473.449 kb on + strand, within MPMX20_01408 at 1473.452 kb on - strand, within MPMX20_01408 at 1473.499 kb on + strand, within MPMX20_01408 at 1473.507 kb on - strand, within MPMX20_01408 at 1473.507 kb on - strand, within MPMX20_01408 at 1473.507 kb on - strand, within MPMX20_01408 at 1473.507 kb on - strand, within MPMX20_01408 at 1473.507 kb on - strand, within MPMX20_01408 at 1473.507 kb on - strand, within MPMX20_01408 at 1473.642 kb on - strand at 1473.707 kb on - strand at 1473.771 kb on - strand at 1473.781 kb on + strand at 1473.836 kb on - strand at 1473.845 kb on + strand at 1473.848 kb on + strand at 1473.848 kb on + strand at 1473.899 kb on - strand, within MPMX20_01409 at 1474.088 kb on - strand, within MPMX20_01409 at 1474.178 kb on + strand, within MPMX20_01409 at 1474.205 kb on + strand, within MPMX20_01409 at 1474.213 kb on - strand, within MPMX20_01409 at 1474.271 kb on - strand, within MPMX20_01409 at 1474.271 kb on - strand, within MPMX20_01409 at 1474.350 kb on - strand, within MPMX20_01409 at 1474.610 kb on + strand, within MPMX20_01409 at 1474.610 kb on + strand, within MPMX20_01409 at 1474.610 kb on + strand, within MPMX20_01409 at 1474.618 kb on - strand, within MPMX20_01409 at 1474.618 kb on - strand, within MPMX20_01409 at 1474.629 kb on - strand at 1474.647 kb on + strand at 1474.647 kb on + strand at 1474.647 kb on + strand at 1474.647 kb on + strand at 1474.647 kb on + strand at 1474.655 kb on - strand at 1474.655 kb on - strand at 1474.655 kb on - strand at 1474.655 kb on - strand at 1474.655 kb on - strand at 1474.699 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,470,722 + MPMX20_01407 0.68 -1.4 1,470,870 - MPMX20_01407 0.89 -0.8 1,470,959 + -1.2 1,470,983 - +1.8 1,471,123 - -2.1 1,471,287 + +2.0 1,471,319 - +0.0 1,471,361 - -1.5 1,471,462 - -0.0 1,471,520 - -0.0 1,471,703 + -2.8 1,471,845 - -1.3 1,471,892 - -1.9 1,471,893 - +0.3 1,471,917 + MPMX20_01408 0.11 -1.5 1,471,917 + MPMX20_01408 0.11 -3.7 1,471,917 + MPMX20_01408 0.11 -1.2 1,471,917 + MPMX20_01408 0.11 -1.2 1,471,925 - MPMX20_01408 0.11 -0.5 1,471,925 - MPMX20_01408 0.11 -1.7 1,471,925 - MPMX20_01408 0.11 -2.4 1,471,990 - MPMX20_01408 0.14 -2.8 1,472,013 - MPMX20_01408 0.15 -0.7 1,472,215 + MPMX20_01408 0.25 -1.9 1,472,223 - MPMX20_01408 0.26 +1.3 1,472,233 - MPMX20_01408 0.26 -1.6 1,472,370 - MPMX20_01408 0.33 -3.2 1,472,426 - MPMX20_01408 0.36 -3.6 1,472,426 - MPMX20_01408 0.36 -0.2 1,472,426 - MPMX20_01408 0.36 -1.5 1,472,447 + MPMX20_01408 0.37 -1.7 1,472,447 + MPMX20_01408 0.37 +1.8 1,472,487 + MPMX20_01408 0.39 -1.7 1,472,495 - MPMX20_01408 0.39 +0.3 1,472,510 + MPMX20_01408 0.40 -2.1 1,472,518 - MPMX20_01408 0.40 -2.2 1,472,563 - MPMX20_01408 0.43 +0.3 1,472,645 + MPMX20_01408 0.47 -0.6 1,472,761 + MPMX20_01408 0.53 -0.7 1,472,817 + MPMX20_01408 0.55 +0.3 1,472,992 - MPMX20_01408 0.64 -1.3 1,472,994 + MPMX20_01408 0.64 -2.4 1,473,095 + MPMX20_01408 0.69 -1.8 1,473,095 + MPMX20_01408 0.69 -2.7 1,473,095 + MPMX20_01408 0.69 -1.9 1,473,206 + MPMX20_01408 0.75 -3.4 1,473,206 + MPMX20_01408 0.75 -1.5 1,473,209 - MPMX20_01408 0.75 +0.8 1,473,214 - MPMX20_01408 0.75 +0.1 1,473,226 + MPMX20_01408 0.76 -0.2 1,473,226 + MPMX20_01408 0.76 -1.6 1,473,226 + MPMX20_01408 0.76 -1.3 1,473,226 + MPMX20_01408 0.76 +0.4 1,473,234 - MPMX20_01408 0.76 -1.0 1,473,236 + MPMX20_01408 0.76 -4.1 1,473,307 + MPMX20_01408 0.80 -1.9 1,473,449 + MPMX20_01408 0.87 -3.1 1,473,452 - MPMX20_01408 0.87 -2.4 1,473,499 + MPMX20_01408 0.89 -1.0 1,473,507 - MPMX20_01408 0.90 -0.7 1,473,507 - MPMX20_01408 0.90 -1.0 1,473,507 - MPMX20_01408 0.90 -3.0 1,473,507 - MPMX20_01408 0.90 -1.2 1,473,507 - MPMX20_01408 0.90 -1.9 1,473,507 - MPMX20_01408 0.90 +1.9 1,473,642 - +1.3 1,473,707 - -2.7 1,473,771 - -0.7 1,473,781 + -0.1 1,473,836 - -0.6 1,473,845 + +1.3 1,473,848 + -1.0 1,473,848 + -0.3 1,473,899 - MPMX20_01409 0.10 -0.3 1,474,088 - MPMX20_01409 0.31 +1.3 1,474,178 + MPMX20_01409 0.41 +0.6 1,474,205 + MPMX20_01409 0.44 -1.7 1,474,213 - MPMX20_01409 0.45 +0.3 1,474,271 - MPMX20_01409 0.51 +1.3 1,474,271 - MPMX20_01409 0.51 -0.6 1,474,350 - MPMX20_01409 0.60 +0.0 1,474,610 + MPMX20_01409 0.89 -0.1 1,474,610 + MPMX20_01409 0.89 +2.9 1,474,610 + MPMX20_01409 0.89 -2.3 1,474,618 - MPMX20_01409 0.90 +0.0 1,474,618 - MPMX20_01409 0.90 +1.3 1,474,629 - -0.6 1,474,647 + -1.0 1,474,647 + +0.5 1,474,647 + +0.4 1,474,647 + +0.9 1,474,647 + +0.8 1,474,655 - +0.2 1,474,655 - -0.1 1,474,655 - +4.9 1,474,655 - +0.4 1,474,655 - +1.7 1,474,699 - +0.0
Or see this region's nucleotide sequence