Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00531 and MPMX20_00532 are separated by 367 nucleotides MPMX20_00532 and MPMX20_00533 are separated by 1 nucleotides
MPMX20_00531: MPMX20_00531 - Anaerobic ribonucleoside-triphosphate reductase, at 547,033 to 549,171
_00531
MPMX20_00532: MPMX20_00532 - hypothetical protein, at 549,539 to 550,111
_00532
MPMX20_00533: MPMX20_00533 - Mannosylglycerate hydrolase, at 550,113 to 552,710
_00533
Position (kb) 549
550
551 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8 at 548.547 kb on - strand, within MPMX20_00531 at 548.569 kb on + strand, within MPMX20_00531 at 548.627 kb on + strand, within MPMX20_00531 at 548.650 kb on + strand, within MPMX20_00531 at 548.658 kb on - strand, within MPMX20_00531 at 548.749 kb on + strand, within MPMX20_00531 at 548.757 kb on - strand, within MPMX20_00531 at 548.790 kb on + strand, within MPMX20_00531 at 548.835 kb on + strand, within MPMX20_00531 at 548.840 kb on + strand, within MPMX20_00531 at 548.840 kb on + strand, within MPMX20_00531 at 548.840 kb on + strand, within MPMX20_00531 at 548.848 kb on - strand, within MPMX20_00531 at 548.874 kb on + strand, within MPMX20_00531 at 548.946 kb on + strand, within MPMX20_00531 at 548.984 kb on + strand at 549.031 kb on + strand at 549.083 kb on + strand at 549.090 kb on - strand at 549.105 kb on - strand at 549.122 kb on + strand at 549.130 kb on - strand at 549.157 kb on - strand at 549.167 kb on + strand at 549.175 kb on - strand at 549.242 kb on + strand at 549.242 kb on + strand at 549.243 kb on + strand at 549.250 kb on - strand at 549.250 kb on - strand at 549.259 kb on - strand at 549.282 kb on + strand at 549.285 kb on + strand at 549.520 kb on - strand at 549.520 kb on - strand at 549.543 kb on - strand at 549.568 kb on - strand at 549.641 kb on - strand, within MPMX20_00532 at 549.746 kb on - strand, within MPMX20_00532 at 549.831 kb on - strand, within MPMX20_00532 at 549.833 kb on + strand, within MPMX20_00532 at 549.925 kb on + strand, within MPMX20_00532 at 549.962 kb on + strand, within MPMX20_00532 at 549.962 kb on + strand, within MPMX20_00532 at 549.962 kb on + strand, within MPMX20_00532 at 549.964 kb on + strand, within MPMX20_00532 at 549.976 kb on + strand, within MPMX20_00532 at 549.976 kb on + strand, within MPMX20_00532 at 549.984 kb on - strand, within MPMX20_00532 at 549.984 kb on - strand, within MPMX20_00532 at 549.984 kb on - strand, within MPMX20_00532 at 550.037 kb on + strand, within MPMX20_00532 at 550.080 kb on + strand at 550.106 kb on + strand at 550.205 kb on + strand at 550.205 kb on + strand at 550.223 kb on - strand at 550.282 kb on + strand at 550.290 kb on - strand at 550.295 kb on - strand at 550.365 kb on - strand at 550.393 kb on + strand, within MPMX20_00533 at 550.420 kb on + strand, within MPMX20_00533 at 550.420 kb on + strand, within MPMX20_00533 at 550.427 kb on - strand, within MPMX20_00533 at 550.433 kb on - strand, within MPMX20_00533 at 550.495 kb on - strand, within MPMX20_00533 at 550.513 kb on + strand, within MPMX20_00533 at 550.521 kb on - strand, within MPMX20_00533 at 550.521 kb on - strand, within MPMX20_00533 at 550.529 kb on + strand, within MPMX20_00533 at 550.547 kb on + strand, within MPMX20_00533 at 550.547 kb on - strand, within MPMX20_00533 at 550.581 kb on + strand, within MPMX20_00533 at 550.588 kb on + strand, within MPMX20_00533 at 550.623 kb on - strand, within MPMX20_00533 at 550.626 kb on + strand, within MPMX20_00533 at 550.626 kb on + strand, within MPMX20_00533 at 550.626 kb on + strand, within MPMX20_00533 at 550.626 kb on + strand, within MPMX20_00533 at 550.626 kb on + strand, within MPMX20_00533 at 550.634 kb on - strand, within MPMX20_00533 at 550.634 kb on - strand, within MPMX20_00533 at 550.634 kb on - strand, within MPMX20_00533 at 550.634 kb on - strand, within MPMX20_00533 at 550.634 kb on - strand, within MPMX20_00533 at 550.634 kb on - strand, within MPMX20_00533 at 550.648 kb on - strand, within MPMX20_00533 at 550.686 kb on + strand, within MPMX20_00533 at 550.694 kb on - strand, within MPMX20_00533 at 550.723 kb on - strand, within MPMX20_00533 at 550.769 kb on + strand, within MPMX20_00533 at 550.823 kb on + strand, within MPMX20_00533 at 550.839 kb on - strand, within MPMX20_00533 at 550.845 kb on - strand, within MPMX20_00533 at 550.894 kb on + strand, within MPMX20_00533 at 551.086 kb on - strand, within MPMX20_00533
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 548,547 - MPMX20_00531 0.71 -0.0 548,569 + MPMX20_00531 0.72 -1.8 548,627 + MPMX20_00531 0.75 -0.5 548,650 + MPMX20_00531 0.76 +0.3 548,658 - MPMX20_00531 0.76 +1.6 548,749 + MPMX20_00531 0.80 +0.3 548,757 - MPMX20_00531 0.81 -0.3 548,790 + MPMX20_00531 0.82 -2.3 548,835 + MPMX20_00531 0.84 -1.3 548,840 + MPMX20_00531 0.84 -2.3 548,840 + MPMX20_00531 0.84 -1.7 548,840 + MPMX20_00531 0.84 -0.5 548,848 - MPMX20_00531 0.85 -1.1 548,874 + MPMX20_00531 0.86 -1.3 548,946 + MPMX20_00531 0.89 -0.6 548,984 + +0.3 549,031 + -0.0 549,083 + -0.7 549,090 - -0.6 549,105 - +0.3 549,122 + +0.3 549,130 - -0.9 549,157 - +0.1 549,167 + -0.5 549,175 - +1.0 549,242 + +1.0 549,242 + -3.4 549,243 + -1.6 549,250 - +1.6 549,250 - +6.6 549,259 - -2.1 549,282 + -2.5 549,285 + -1.6 549,520 - -0.0 549,520 - -1.0 549,543 - -0.4 549,568 - -0.4 549,641 - MPMX20_00532 0.18 +0.3 549,746 - MPMX20_00532 0.36 +8.3 549,831 - MPMX20_00532 0.51 -1.2 549,833 + MPMX20_00532 0.51 +1.8 549,925 + MPMX20_00532 0.67 -0.5 549,962 + MPMX20_00532 0.74 -1.1 549,962 + MPMX20_00532 0.74 -0.3 549,962 + MPMX20_00532 0.74 +1.0 549,964 + MPMX20_00532 0.74 +1.0 549,976 + MPMX20_00532 0.76 -2.1 549,976 + MPMX20_00532 0.76 -0.9 549,984 - MPMX20_00532 0.78 -0.0 549,984 - MPMX20_00532 0.78 -1.3 549,984 - MPMX20_00532 0.78 -1.9 550,037 + MPMX20_00532 0.87 +1.2 550,080 + +0.3 550,106 + -0.0 550,205 + -2.1 550,205 + -1.0 550,223 - -1.7 550,282 + -0.2 550,290 - -2.5 550,295 - -0.2 550,365 - -1.0 550,393 + MPMX20_00533 0.11 -2.5 550,420 + MPMX20_00533 0.12 -1.9 550,420 + MPMX20_00533 0.12 -0.1 550,427 - MPMX20_00533 0.12 -0.3 550,433 - MPMX20_00533 0.12 -2.3 550,495 - MPMX20_00533 0.15 -2.9 550,513 + MPMX20_00533 0.15 +0.1 550,521 - MPMX20_00533 0.16 +1.3 550,521 - MPMX20_00533 0.16 +1.8 550,529 + MPMX20_00533 0.16 -0.0 550,547 + MPMX20_00533 0.17 +1.0 550,547 - MPMX20_00533 0.17 +0.0 550,581 + MPMX20_00533 0.18 +1.7 550,588 + MPMX20_00533 0.18 +0.5 550,623 - MPMX20_00533 0.20 +0.6 550,626 + MPMX20_00533 0.20 -0.2 550,626 + MPMX20_00533 0.20 +0.3 550,626 + MPMX20_00533 0.20 +5.2 550,626 + MPMX20_00533 0.20 -0.2 550,626 + MPMX20_00533 0.20 +2.6 550,634 - MPMX20_00533 0.20 -0.6 550,634 - MPMX20_00533 0.20 -1.2 550,634 - MPMX20_00533 0.20 -2.5 550,634 - MPMX20_00533 0.20 -0.3 550,634 - MPMX20_00533 0.20 -1.9 550,634 - MPMX20_00533 0.20 +0.3 550,648 - MPMX20_00533 0.21 -0.5 550,686 + MPMX20_00533 0.22 -0.9 550,694 - MPMX20_00533 0.22 -1.1 550,723 - MPMX20_00533 0.23 -1.9 550,769 + MPMX20_00533 0.25 -0.9 550,823 + MPMX20_00533 0.27 -0.4 550,839 - MPMX20_00533 0.28 -1.7 550,845 - MPMX20_00533 0.28 +4.2 550,894 + MPMX20_00533 0.30 -2.8 551,086 - MPMX20_00533 0.37 -0.8
Or see this region's nucleotide sequence