Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00529

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00528 and MPMX20_00529 are separated by 77 nucleotidesMPMX20_00529 and MPMX20_00530 are separated by 277 nucleotidesMPMX20_00530 and MPMX20_00531 are separated by 138 nucleotides MPMX20_00528: MPMX20_00528 - putative licABCH operon regulator, at 543,922 to 545,832 _00528 MPMX20_00529: MPMX20_00529 - Antitoxin RelB, at 545,910 to 546,152 _00529 MPMX20_00530: MPMX20_00530 - Anaerobic ribonucleoside-triphosphate reductase-activating protein, at 546,430 to 546,894 _00530 MPMX20_00531: MPMX20_00531 - Anaerobic ribonucleoside-triphosphate reductase, at 547,033 to 549,171 _00531 Position (kb) 545 546 547Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 544.939 kb on + strand, within MPMX20_00528at 544.966 kb on - strand, within MPMX20_00528at 544.986 kb on + strand, within MPMX20_00528at 544.987 kb on + strand, within MPMX20_00528at 544.994 kb on - strand, within MPMX20_00528at 544.995 kb on - strand, within MPMX20_00528at 544.995 kb on - strand, within MPMX20_00528at 545.005 kb on + strand, within MPMX20_00528at 545.005 kb on + strand, within MPMX20_00528at 545.179 kb on + strand, within MPMX20_00528at 545.187 kb on - strand, within MPMX20_00528at 545.187 kb on - strand, within MPMX20_00528at 545.210 kb on - strand, within MPMX20_00528at 545.219 kb on + strand, within MPMX20_00528at 545.219 kb on + strand, within MPMX20_00528at 545.219 kb on + strand, within MPMX20_00528at 545.227 kb on - strand, within MPMX20_00528at 545.227 kb on - strand, within MPMX20_00528at 545.227 kb on - strand, within MPMX20_00528at 545.281 kb on + strand, within MPMX20_00528at 545.286 kb on + strand, within MPMX20_00528at 545.360 kb on + strand, within MPMX20_00528at 545.382 kb on - strand, within MPMX20_00528at 545.383 kb on - strand, within MPMX20_00528at 545.462 kb on + strand, within MPMX20_00528at 545.481 kb on + strand, within MPMX20_00528at 545.481 kb on + strand, within MPMX20_00528at 545.481 kb on + strand, within MPMX20_00528at 545.484 kb on - strand, within MPMX20_00528at 545.489 kb on - strand, within MPMX20_00528at 545.489 kb on - strand, within MPMX20_00528at 545.489 kb on - strand, within MPMX20_00528at 545.544 kb on + strand, within MPMX20_00528at 545.567 kb on + strand, within MPMX20_00528at 545.585 kb on + strand, within MPMX20_00528at 545.593 kb on - strand, within MPMX20_00528at 545.593 kb on - strand, within MPMX20_00528at 545.593 kb on - strand, within MPMX20_00528at 545.613 kb on + strand, within MPMX20_00528at 545.621 kb on - strand, within MPMX20_00528at 545.621 kb on - strand, within MPMX20_00528at 545.634 kb on + strand, within MPMX20_00528at 545.637 kb on + strand, within MPMX20_00528at 545.645 kb on - strandat 545.759 kb on + strandat 545.764 kb on + strandat 545.767 kb on - strandat 545.962 kb on - strand, within MPMX20_00529at 545.962 kb on - strand, within MPMX20_00529at 545.962 kb on - strand, within MPMX20_00529at 546.058 kb on + strand, within MPMX20_00529at 546.058 kb on + strand, within MPMX20_00529at 546.060 kb on + strand, within MPMX20_00529at 546.060 kb on + strand, within MPMX20_00529at 546.070 kb on + strand, within MPMX20_00529at 546.083 kb on + strand, within MPMX20_00529at 546.083 kb on + strand, within MPMX20_00529at 546.083 kb on + strand, within MPMX20_00529at 546.089 kb on - strand, within MPMX20_00529at 546.091 kb on - strand, within MPMX20_00529at 546.091 kb on - strand, within MPMX20_00529at 546.091 kb on - strand, within MPMX20_00529at 546.091 kb on - strand, within MPMX20_00529at 546.091 kb on - strand, within MPMX20_00529at 546.093 kb on + strand, within MPMX20_00529at 546.101 kb on - strand, within MPMX20_00529at 546.101 kb on - strand, within MPMX20_00529at 546.124 kb on - strand, within MPMX20_00529at 546.138 kb on - strandat 546.144 kb on - strandat 546.173 kb on + strandat 546.181 kb on + strandat 546.185 kb on + strandat 546.185 kb on + strandat 546.189 kb on - strandat 546.193 kb on - strandat 546.193 kb on - strandat 546.195 kb on + strandat 546.203 kb on - strandat 546.203 kb on - strandat 546.245 kb on - strandat 546.249 kb on + strandat 546.249 kb on + strandat 546.249 kb on + strandat 546.257 kb on - strandat 546.257 kb on - strandat 546.263 kb on - strandat 546.342 kb on + strandat 546.345 kb on - strandat 546.347 kb on + strandat 546.350 kb on - strandat 546.350 kb on - strandat 546.350 kb on - strandat 546.356 kb on - strandat 546.362 kb on + strandat 546.370 kb on - strandat 546.376 kb on + strandat 546.428 kb on - strandat 546.447 kb on + strandat 546.475 kb on - strandat 546.475 kb on - strandat 546.475 kb on - strandat 546.485 kb on - strand, within MPMX20_00530at 546.494 kb on - strand, within MPMX20_00530at 546.511 kb on - strand, within MPMX20_00530at 546.524 kb on - strand, within MPMX20_00530at 546.532 kb on + strand, within MPMX20_00530at 546.544 kb on + strand, within MPMX20_00530at 546.547 kb on - strand, within MPMX20_00530at 546.552 kb on - strand, within MPMX20_00530at 546.552 kb on - strand, within MPMX20_00530at 546.557 kb on - strand, within MPMX20_00530at 546.562 kb on - strand, within MPMX20_00530at 546.562 kb on - strand, within MPMX20_00530at 546.590 kb on + strand, within MPMX20_00530at 546.633 kb on + strand, within MPMX20_00530at 546.674 kb on + strand, within MPMX20_00530at 546.692 kb on - strand, within MPMX20_00530at 546.771 kb on - strand, within MPMX20_00530at 546.818 kb on - strand, within MPMX20_00530at 546.820 kb on + strand, within MPMX20_00530at 546.872 kb on + strandat 546.880 kb on - strandat 546.885 kb on - strandat 546.885 kb on - strandat 546.902 kb on + strandat 546.908 kb on + strandat 546.910 kb on - strandat 546.910 kb on - strandat 546.933 kb on + strandat 546.933 kb on + strandat 546.933 kb on + strandat 546.933 kb on + strandat 546.941 kb on - strandat 546.941 kb on - strandat 546.999 kb on - strandat 546.999 kb on - strandat 547.003 kb on + strandat 547.004 kb on + strandat 547.004 kb on + strandat 547.010 kb on + strandat 547.011 kb on - strandat 547.018 kb on - strandat 547.071 kb on + strandat 547.084 kb on - strandat 547.084 kb on - strandat 547.118 kb on - strandat 547.118 kb on - strandat 547.128 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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544,939 + MPMX20_00528 0.53 -0.9
544,966 - MPMX20_00528 0.55 -0.0
544,986 + MPMX20_00528 0.56 +1.6
544,987 + MPMX20_00528 0.56 -0.6
544,994 - MPMX20_00528 0.56 +0.6
544,995 - MPMX20_00528 0.56 -1.0
544,995 - MPMX20_00528 0.56 -2.1
545,005 + MPMX20_00528 0.57 +1.7
545,005 + MPMX20_00528 0.57 -0.4
545,179 + MPMX20_00528 0.66 +2.6
545,187 - MPMX20_00528 0.66 +1.6
545,187 - MPMX20_00528 0.66 -0.3
545,210 - MPMX20_00528 0.67 +0.4
545,219 + MPMX20_00528 0.68 -0.4
545,219 + MPMX20_00528 0.68 +2.6
545,219 + MPMX20_00528 0.68 -0.9
545,227 - MPMX20_00528 0.68 -0.5
545,227 - MPMX20_00528 0.68 +0.9
545,227 - MPMX20_00528 0.68 -1.5
545,281 + MPMX20_00528 0.71 +0.6
545,286 + MPMX20_00528 0.71 -0.6
545,360 + MPMX20_00528 0.75 -0.6
545,382 - MPMX20_00528 0.76 -1.9
545,383 - MPMX20_00528 0.76 +2.6
545,462 + MPMX20_00528 0.81 -2.1
545,481 + MPMX20_00528 0.82 -1.4
545,481 + MPMX20_00528 0.82 +1.0
545,481 + MPMX20_00528 0.82 +0.3
545,484 - MPMX20_00528 0.82 +4.2
545,489 - MPMX20_00528 0.82 -0.4
545,489 - MPMX20_00528 0.82 -1.1
545,489 - MPMX20_00528 0.82 -1.0
545,544 + MPMX20_00528 0.85 -0.9
545,567 + MPMX20_00528 0.86 -1.9
545,585 + MPMX20_00528 0.87 -0.7
545,593 - MPMX20_00528 0.87 -1.5
545,593 - MPMX20_00528 0.87 -0.3
545,593 - MPMX20_00528 0.87 +4.6
545,613 + MPMX20_00528 0.88 -1.8
545,621 - MPMX20_00528 0.89 +0.4
545,621 - MPMX20_00528 0.89 +0.3
545,634 + MPMX20_00528 0.90 -0.5
545,637 + MPMX20_00528 0.90 -0.7
545,645 - -0.7
545,759 + +0.6
545,764 + -1.4
545,767 - -0.2
545,962 - MPMX20_00529 0.21 +1.0
545,962 - MPMX20_00529 0.21 +3.2
545,962 - MPMX20_00529 0.21 +1.6
546,058 + MPMX20_00529 0.61 -2.1
546,058 + MPMX20_00529 0.61 -1.3
546,060 + MPMX20_00529 0.62 +1.8
546,060 + MPMX20_00529 0.62 -1.6
546,070 + MPMX20_00529 0.66 +0.8
546,083 + MPMX20_00529 0.71 -2.1
546,083 + MPMX20_00529 0.71 -0.0
546,083 + MPMX20_00529 0.71 -1.5
546,089 - MPMX20_00529 0.74 -1.7
546,091 - MPMX20_00529 0.74 +0.0
546,091 - MPMX20_00529 0.74 -2.0
546,091 - MPMX20_00529 0.74 -2.8
546,091 - MPMX20_00529 0.74 -1.2
546,091 - MPMX20_00529 0.74 +1.0
546,093 + MPMX20_00529 0.75 -0.2
546,101 - MPMX20_00529 0.79 -0.2
546,101 - MPMX20_00529 0.79 +0.6
546,124 - MPMX20_00529 0.88 +1.9
546,138 - +1.1
546,144 - -1.2
546,173 + -1.1
546,181 + -1.0
546,185 + +0.7
546,185 + +0.5
546,189 - -1.3
546,193 - -0.8
546,193 - -0.7
546,195 + -0.4
546,203 - -1.1
546,203 - +2.6
546,245 - -0.9
546,249 + -2.6
546,249 + -0.9
546,249 + +1.6
546,257 - -0.6
546,257 - -2.2
546,263 - +0.6
546,342 + +0.6
546,345 - -2.7
546,347 + +2.6
546,350 - +1.2
546,350 - -1.6
546,350 - -1.4
546,356 - -0.6
546,362 + +0.3
546,370 - -0.4
546,376 + -1.6
546,428 - +1.6
546,447 + -2.6
546,475 - +0.4
546,475 - +0.1
546,475 - -0.2
546,485 - MPMX20_00530 0.12 +0.3
546,494 - MPMX20_00530 0.14 -0.2
546,511 - MPMX20_00530 0.17 +0.6
546,524 - MPMX20_00530 0.20 -0.2
546,532 + MPMX20_00530 0.22 -1.4
546,544 + MPMX20_00530 0.25 +2.3
546,547 - MPMX20_00530 0.25 -2.8
546,552 - MPMX20_00530 0.26 +1.3
546,552 - MPMX20_00530 0.26 +0.1
546,557 - MPMX20_00530 0.27 -2.1
546,562 - MPMX20_00530 0.28 -0.2
546,562 - MPMX20_00530 0.28 +1.6
546,590 + MPMX20_00530 0.34 +0.6
546,633 + MPMX20_00530 0.44 +3.0
546,674 + MPMX20_00530 0.52 +0.6
546,692 - MPMX20_00530 0.56 -1.2
546,771 - MPMX20_00530 0.73 -0.9
546,818 - MPMX20_00530 0.83 -1.4
546,820 + MPMX20_00530 0.84 +1.0
546,872 + +1.2
546,880 - -1.9
546,885 - -1.0
546,885 - +0.4
546,902 + -0.2
546,908 + -1.7
546,910 - -2.5
546,910 - -2.2
546,933 + -0.2
546,933 + +1.6
546,933 + -0.9
546,933 + -2.2
546,941 - +1.6
546,941 - -0.3
546,999 - +2.6
546,999 - +0.9
547,003 + +1.6
547,004 + -0.4
547,004 + -1.5
547,010 + -0.9
547,011 - -1.6
547,018 - -2.9
547,071 + +0.6
547,084 - +0.3
547,084 - -2.1
547,118 - +1.6
547,118 - +1.0
547,128 - -0.9

Or see this region's nucleotide sequence