Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00212

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00211 and MPMX20_00212 are separated by 329 nucleotidesMPMX20_00212 and MPMX20_00213 overlap by 4 nucleotidesMPMX20_00213 and MPMX20_00214 are separated by 1 nucleotidesMPMX20_00214 and MPMX20_00215 overlap by 17 nucleotides MPMX20_00211: MPMX20_00211 - hypothetical protein, at 220,331 to 221,872 _00211 MPMX20_00212: MPMX20_00212 - 2-iminoacetate synthase, at 222,202 to 223,335 _00212 MPMX20_00213: MPMX20_00213 - Thiazole synthase, at 223,332 to 224,102 _00213 MPMX20_00214: MPMX20_00214 - Sulfur carrier protein ThiS, at 224,104 to 224,304 _00214 MPMX20_00215: MPMX20_00215 - Sulfur carrier protein ThiS adenylyltransferase, at 224,288 to 225,043 _00215 Position (kb) 222 223 224Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 221.202 kb on + strand, within MPMX20_00211at 221.254 kb on - strand, within MPMX20_00211at 221.259 kb on + strand, within MPMX20_00211at 221.269 kb on + strand, within MPMX20_00211at 221.269 kb on + strand, within MPMX20_00211at 221.275 kb on + strand, within MPMX20_00211at 221.277 kb on - strand, within MPMX20_00211at 221.277 kb on - strand, within MPMX20_00211at 221.377 kb on + strand, within MPMX20_00211at 221.399 kb on - strand, within MPMX20_00211at 221.582 kb on + strand, within MPMX20_00211at 221.588 kb on + strand, within MPMX20_00211at 221.590 kb on - strand, within MPMX20_00211at 221.784 kb on + strandat 221.790 kb on - strandat 221.794 kb on + strandat 221.794 kb on + strandat 221.794 kb on + strandat 221.794 kb on + strandat 221.794 kb on + strandat 221.794 kb on + strandat 221.794 kb on + strandat 221.802 kb on - strandat 221.802 kb on - strandat 221.802 kb on - strandat 221.802 kb on - strandat 221.823 kb on - strandat 221.868 kb on + strandat 221.875 kb on + strandat 221.876 kb on - strandat 221.883 kb on - strandat 221.920 kb on - strandat 221.925 kb on + strandat 221.927 kb on + strandat 221.938 kb on + strandat 221.938 kb on + strandat 221.938 kb on + strandat 221.946 kb on - strandat 221.946 kb on - strandat 222.017 kb on + strandat 222.048 kb on + strandat 222.048 kb on + strandat 222.056 kb on - strandat 222.056 kb on - strandat 222.056 kb on - strandat 222.096 kb on - strandat 222.096 kb on - strandat 222.221 kb on + strandat 222.243 kb on - strandat 222.245 kb on + strandat 222.255 kb on + strandat 222.281 kb on + strandat 222.410 kb on - strand, within MPMX20_00212at 222.525 kb on + strand, within MPMX20_00212at 222.546 kb on + strand, within MPMX20_00212at 222.599 kb on + strand, within MPMX20_00212at 222.629 kb on - strand, within MPMX20_00212at 222.696 kb on + strand, within MPMX20_00212at 222.831 kb on + strand, within MPMX20_00212at 222.839 kb on - strand, within MPMX20_00212at 222.853 kb on + strand, within MPMX20_00212at 222.989 kb on + strand, within MPMX20_00212at 223.011 kb on + strand, within MPMX20_00212at 223.015 kb on - strand, within MPMX20_00212at 223.072 kb on + strand, within MPMX20_00212at 223.080 kb on - strand, within MPMX20_00212at 223.086 kb on + strand, within MPMX20_00212at 223.086 kb on + strand, within MPMX20_00212at 223.086 kb on + strand, within MPMX20_00212at 223.193 kb on + strand, within MPMX20_00212at 223.193 kb on + strand, within MPMX20_00212at 223.196 kb on - strand, within MPMX20_00212at 223.201 kb on - strand, within MPMX20_00212at 223.206 kb on - strand, within MPMX20_00212at 223.284 kb on + strandat 223.284 kb on + strandat 223.284 kb on + strandat 223.292 kb on - strandat 223.292 kb on - strandat 223.292 kb on - strandat 223.292 kb on - strandat 223.368 kb on + strandat 223.594 kb on - strand, within MPMX20_00213at 223.648 kb on - strand, within MPMX20_00213at 223.722 kb on - strand, within MPMX20_00213at 223.734 kb on + strand, within MPMX20_00213at 223.734 kb on + strand, within MPMX20_00213at 223.794 kb on + strand, within MPMX20_00213at 224.025 kb on - strand, within MPMX20_00213at 224.043 kb on + strandat 224.100 kb on + strandat 224.133 kb on + strand, within MPMX20_00214at 224.163 kb on - strand, within MPMX20_00214at 224.164 kb on - strand, within MPMX20_00214at 224.173 kb on - strand, within MPMX20_00214at 224.255 kb on - strand, within MPMX20_00214at 224.261 kb on - strand, within MPMX20_00214at 224.278 kb on - strand, within MPMX20_00214at 224.285 kb on + strandat 224.293 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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221,202 + MPMX20_00211 0.56 -0.5
221,254 - MPMX20_00211 0.60 -1.9
221,259 + MPMX20_00211 0.60 +2.6
221,269 + MPMX20_00211 0.61 -1.5
221,269 + MPMX20_00211 0.61 -2.8
221,275 + MPMX20_00211 0.61 +0.4
221,277 - MPMX20_00211 0.61 -0.1
221,277 - MPMX20_00211 0.61 -1.8
221,377 + MPMX20_00211 0.68 -1.6
221,399 - MPMX20_00211 0.69 +0.6
221,582 + MPMX20_00211 0.81 -0.5
221,588 + MPMX20_00211 0.82 +1.9
221,590 - MPMX20_00211 0.82 -0.8
221,784 + +0.5
221,790 - +1.0
221,794 + -0.8
221,794 + +0.1
221,794 + -0.4
221,794 + +1.9
221,794 + -1.1
221,794 + -1.2
221,794 + -0.2
221,802 - -1.1
221,802 - +3.2
221,802 - -3.0
221,802 - -1.0
221,823 - +0.2
221,868 + +2.4
221,875 + -0.7
221,876 - -0.1
221,883 - +0.0
221,920 - -1.8
221,925 + -0.2
221,927 + -1.8
221,938 + -1.1
221,938 + +0.7
221,938 + -1.0
221,946 - +2.6
221,946 - +1.6
222,017 + -2.1
222,048 + -1.3
222,048 + -0.1
222,056 - -0.5
222,056 - +0.6
222,056 - -0.5
222,096 - -0.7
222,096 - +2.3
222,221 + -1.3
222,243 - -2.3
222,245 + +0.2
222,255 + +0.0
222,281 + +2.6
222,410 - MPMX20_00212 0.18 +1.6
222,525 + MPMX20_00212 0.28 +0.2
222,546 + MPMX20_00212 0.30 -0.2
222,599 + MPMX20_00212 0.35 -1.0
222,629 - MPMX20_00212 0.38 -1.4
222,696 + MPMX20_00212 0.44 +2.6
222,831 + MPMX20_00212 0.55 +3.1
222,839 - MPMX20_00212 0.56 -0.2
222,853 + MPMX20_00212 0.57 +1.4
222,989 + MPMX20_00212 0.69 -0.4
223,011 + MPMX20_00212 0.71 +0.0
223,015 - MPMX20_00212 0.72 -0.8
223,072 + MPMX20_00212 0.77 -2.8
223,080 - MPMX20_00212 0.77 -0.2
223,086 + MPMX20_00212 0.78 +1.6
223,086 + MPMX20_00212 0.78 -1.3
223,086 + MPMX20_00212 0.78 -1.7
223,193 + MPMX20_00212 0.87 +2.6
223,193 + MPMX20_00212 0.87 +0.4
223,196 - MPMX20_00212 0.88 +0.1
223,201 - MPMX20_00212 0.88 +0.2
223,206 - MPMX20_00212 0.89 -0.8
223,284 + +0.4
223,284 + -1.0
223,284 + -2.7
223,292 - -3.7
223,292 - +1.6
223,292 - -0.5
223,292 - -2.2
223,368 + -1.6
223,594 - MPMX20_00213 0.34 -1.1
223,648 - MPMX20_00213 0.41 +1.0
223,722 - MPMX20_00213 0.51 -0.4
223,734 + MPMX20_00213 0.52 +0.3
223,734 + MPMX20_00213 0.52 +3.6
223,794 + MPMX20_00213 0.60 +2.6
224,025 - MPMX20_00213 0.90 +2.6
224,043 + -0.2
224,100 + +0.6
224,133 + MPMX20_00214 0.14 +1.6
224,163 - MPMX20_00214 0.29 -0.7
224,164 - MPMX20_00214 0.30 -3.0
224,173 - MPMX20_00214 0.34 -1.6
224,255 - MPMX20_00214 0.75 +0.3
224,261 - MPMX20_00214 0.78 +0.0
224,278 - MPMX20_00214 0.87 -1.2
224,285 + +1.3
224,293 - -0.7

Or see this region's nucleotide sequence