Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00990

Experiment: TSB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00989 and MPMX20_00990 are separated by 152 nucleotidesMPMX20_00990 and MPMX20_00991 are separated by 200 nucleotidesMPMX20_00991 and MPMX20_00992 are separated by 48 nucleotides MPMX20_00989: MPMX20_00989 - Proline-specific permease ProY, at 1,041,971 to 1,043,344 _00989 MPMX20_00990: MPMX20_00990 - Maltodextrin glucosidase, at 1,043,497 to 1,045,314 _00990 MPMX20_00991: MPMX20_00991 - hypothetical protein, at 1,045,515 to 1,046,156 _00991 MPMX20_00992: MPMX20_00992 - hypothetical protein, at 1,046,205 to 1,046,750 _00992 Position (kb) 1043 1044 1045 1046Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 1042.558 kb on + strand, within MPMX20_00989at 1042.596 kb on + strand, within MPMX20_00989at 1042.788 kb on + strand, within MPMX20_00989at 1042.795 kb on + strand, within MPMX20_00989at 1042.796 kb on + strand, within MPMX20_00989at 1042.796 kb on - strand, within MPMX20_00989at 1042.881 kb on - strand, within MPMX20_00989at 1042.979 kb on - strand, within MPMX20_00989at 1042.986 kb on + strand, within MPMX20_00989at 1042.994 kb on - strand, within MPMX20_00989at 1042.994 kb on - strand, within MPMX20_00989at 1042.994 kb on - strand, within MPMX20_00989at 1043.018 kb on - strand, within MPMX20_00989at 1043.019 kb on + strand, within MPMX20_00989at 1043.419 kb on + strandat 1043.444 kb on + strandat 1043.453 kb on + strandat 1043.514 kb on + strandat 1043.514 kb on - strandat 1043.522 kb on - strandat 1043.735 kb on + strand, within MPMX20_00990at 1043.743 kb on - strand, within MPMX20_00990at 1043.899 kb on - strand, within MPMX20_00990at 1043.918 kb on - strand, within MPMX20_00990at 1043.918 kb on - strand, within MPMX20_00990at 1043.960 kb on + strand, within MPMX20_00990at 1043.961 kb on - strand, within MPMX20_00990at 1043.961 kb on - strand, within MPMX20_00990at 1043.968 kb on - strand, within MPMX20_00990at 1044.082 kb on + strand, within MPMX20_00990at 1044.102 kb on + strand, within MPMX20_00990at 1044.102 kb on + strand, within MPMX20_00990at 1044.110 kb on - strand, within MPMX20_00990at 1044.160 kb on - strand, within MPMX20_00990at 1044.162 kb on + strand, within MPMX20_00990at 1044.234 kb on - strand, within MPMX20_00990at 1044.259 kb on - strand, within MPMX20_00990at 1044.366 kb on + strand, within MPMX20_00990at 1044.439 kb on + strand, within MPMX20_00990at 1044.447 kb on - strand, within MPMX20_00990at 1044.449 kb on + strand, within MPMX20_00990at 1044.465 kb on + strand, within MPMX20_00990at 1044.591 kb on + strand, within MPMX20_00990at 1044.599 kb on - strand, within MPMX20_00990at 1044.772 kb on + strand, within MPMX20_00990at 1044.780 kb on - strand, within MPMX20_00990at 1044.781 kb on + strand, within MPMX20_00990at 1044.823 kb on - strand, within MPMX20_00990at 1044.823 kb on - strand, within MPMX20_00990at 1044.879 kb on - strand, within MPMX20_00990at 1044.893 kb on + strand, within MPMX20_00990at 1045.026 kb on + strand, within MPMX20_00990at 1045.029 kb on - strand, within MPMX20_00990at 1045.031 kb on + strand, within MPMX20_00990at 1045.031 kb on + strand, within MPMX20_00990at 1045.035 kb on + strand, within MPMX20_00990at 1045.039 kb on - strand, within MPMX20_00990at 1045.065 kb on + strand, within MPMX20_00990at 1045.085 kb on - strand, within MPMX20_00990at 1045.107 kb on - strand, within MPMX20_00990at 1045.136 kb on + strandat 1045.170 kb on + strandat 1045.215 kb on - strandat 1045.242 kb on + strandat 1045.242 kb on + strandat 1045.249 kb on + strandat 1045.250 kb on - strandat 1045.267 kb on + strandat 1045.294 kb on + strandat 1045.315 kb on - strandat 1045.374 kb on + strandat 1045.437 kb on - strandat 1045.469 kb on - strandat 1045.538 kb on - strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.549 kb on - strandat 1045.549 kb on - strandat 1045.648 kb on - strand, within MPMX20_00991at 1045.674 kb on + strand, within MPMX20_00991at 1045.674 kb on + strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.683 kb on - strand, within MPMX20_00991at 1045.684 kb on - strand, within MPMX20_00991at 1045.689 kb on - strand, within MPMX20_00991at 1045.712 kb on + strand, within MPMX20_00991at 1045.712 kb on + strand, within MPMX20_00991at 1045.715 kb on - strand, within MPMX20_00991at 1045.720 kb on - strand, within MPMX20_00991at 1045.745 kb on + strand, within MPMX20_00991at 1045.762 kb on - strand, within MPMX20_00991at 1045.771 kb on - strand, within MPMX20_00991at 1045.773 kb on - strand, within MPMX20_00991at 1045.775 kb on + strand, within MPMX20_00991at 1045.868 kb on - strand, within MPMX20_00991at 1045.898 kb on - strand, within MPMX20_00991at 1045.898 kb on - strand, within MPMX20_00991at 1045.974 kb on + strand, within MPMX20_00991at 1046.002 kb on + strand, within MPMX20_00991at 1046.061 kb on + strand, within MPMX20_00991at 1046.069 kb on - strand, within MPMX20_00991at 1046.069 kb on - strand, within MPMX20_00991at 1046.075 kb on - strand, within MPMX20_00991at 1046.081 kb on + strand, within MPMX20_00991at 1046.081 kb on + strand, within MPMX20_00991at 1046.086 kb on + strand, within MPMX20_00991at 1046.097 kb on + strandat 1046.115 kb on + strandat 1046.115 kb on + strandat 1046.123 kb on - strandat 1046.123 kb on - strandat 1046.123 kb on - strandat 1046.123 kb on - strandat 1046.123 kb on - strandat 1046.151 kb on + strandat 1046.159 kb on - strandat 1046.200 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,042,558 + MPMX20_00989 0.43 -0.0
1,042,596 + MPMX20_00989 0.45 +2.0
1,042,788 + MPMX20_00989 0.59 -0.9
1,042,795 + MPMX20_00989 0.60 +0.4
1,042,796 + MPMX20_00989 0.60 +1.4
1,042,796 - MPMX20_00989 0.60 -1.3
1,042,881 - MPMX20_00989 0.66 +1.4
1,042,979 - MPMX20_00989 0.73 -0.2
1,042,986 + MPMX20_00989 0.74 -0.5
1,042,994 - MPMX20_00989 0.74 -0.9
1,042,994 - MPMX20_00989 0.74 +1.0
1,042,994 - MPMX20_00989 0.74 -0.6
1,043,018 - MPMX20_00989 0.76 +1.0
1,043,019 + MPMX20_00989 0.76 -0.0
1,043,419 + -0.4
1,043,444 + +1.2
1,043,453 + -0.1
1,043,514 + -1.3
1,043,514 - +0.2
1,043,522 - -0.8
1,043,735 + MPMX20_00990 0.13 -0.8
1,043,743 - MPMX20_00990 0.14 -0.2
1,043,899 - MPMX20_00990 0.22 -0.6
1,043,918 - MPMX20_00990 0.23 -0.2
1,043,918 - MPMX20_00990 0.23 +1.0
1,043,960 + MPMX20_00990 0.25 +2.0
1,043,961 - MPMX20_00990 0.26 -0.2
1,043,961 - MPMX20_00990 0.26 +0.1
1,043,968 - MPMX20_00990 0.26 +1.0
1,044,082 + MPMX20_00990 0.32 -2.0
1,044,102 + MPMX20_00990 0.33 -0.6
1,044,102 + MPMX20_00990 0.33 +2.5
1,044,110 - MPMX20_00990 0.34 -1.2
1,044,160 - MPMX20_00990 0.36 -1.7
1,044,162 + MPMX20_00990 0.37 -1.0
1,044,234 - MPMX20_00990 0.41 -0.1
1,044,259 - MPMX20_00990 0.42 -0.2
1,044,366 + MPMX20_00990 0.48 -1.0
1,044,439 + MPMX20_00990 0.52 +1.7
1,044,447 - MPMX20_00990 0.52 -2.1
1,044,449 + MPMX20_00990 0.52 -0.1
1,044,465 + MPMX20_00990 0.53 +0.7
1,044,591 + MPMX20_00990 0.60 +0.1
1,044,599 - MPMX20_00990 0.61 +0.2
1,044,772 + MPMX20_00990 0.70 +1.0
1,044,780 - MPMX20_00990 0.71 -0.0
1,044,781 + MPMX20_00990 0.71 -0.6
1,044,823 - MPMX20_00990 0.73 +0.9
1,044,823 - MPMX20_00990 0.73 +0.1
1,044,879 - MPMX20_00990 0.76 -0.2
1,044,893 + MPMX20_00990 0.77 +0.7
1,045,026 + MPMX20_00990 0.84 +0.4
1,045,029 - MPMX20_00990 0.84 -0.2
1,045,031 + MPMX20_00990 0.84 -2.0
1,045,031 + MPMX20_00990 0.84 -0.2
1,045,035 + MPMX20_00990 0.85 -1.0
1,045,039 - MPMX20_00990 0.85 +0.4
1,045,065 + MPMX20_00990 0.86 -0.8
1,045,085 - MPMX20_00990 0.87 -0.7
1,045,107 - MPMX20_00990 0.89 -0.3
1,045,136 + +0.2
1,045,170 + -0.0
1,045,215 - +1.3
1,045,242 + -0.8
1,045,242 + -1.4
1,045,249 + +0.3
1,045,250 - +1.3
1,045,267 + +1.7
1,045,294 + +1.0
1,045,315 - -0.1
1,045,374 + -1.8
1,045,437 - -0.0
1,045,469 - +1.2
1,045,538 - +0.0
1,045,541 + -1.3
1,045,541 + -0.3
1,045,541 + -0.3
1,045,541 + -1.4
1,045,541 + -0.5
1,045,541 + -0.7
1,045,541 + +3.2
1,045,549 - -0.8
1,045,549 - -0.2
1,045,648 - MPMX20_00991 0.21 +0.6
1,045,674 + MPMX20_00991 0.25 -1.8
1,045,674 + MPMX20_00991 0.25 -0.3
1,045,682 - MPMX20_00991 0.26 -0.3
1,045,682 - MPMX20_00991 0.26 +1.3
1,045,682 - MPMX20_00991 0.26 +1.0
1,045,682 - MPMX20_00991 0.26 +1.3
1,045,682 - MPMX20_00991 0.26 -0.7
1,045,683 - MPMX20_00991 0.26 -1.6
1,045,684 - MPMX20_00991 0.26 -0.4
1,045,689 - MPMX20_00991 0.27 -0.3
1,045,712 + MPMX20_00991 0.31 +1.0
1,045,712 + MPMX20_00991 0.31 +2.1
1,045,715 - MPMX20_00991 0.31 -1.7
1,045,720 - MPMX20_00991 0.32 +0.5
1,045,745 + MPMX20_00991 0.36 +0.7
1,045,762 - MPMX20_00991 0.38 +1.3
1,045,771 - MPMX20_00991 0.40 -1.5
1,045,773 - MPMX20_00991 0.40 +2.4
1,045,775 + MPMX20_00991 0.40 -0.8
1,045,868 - MPMX20_00991 0.55 +1.0
1,045,898 - MPMX20_00991 0.60 -0.7
1,045,898 - MPMX20_00991 0.60 +7.0
1,045,974 + MPMX20_00991 0.71 +0.5
1,046,002 + MPMX20_00991 0.76 -2.0
1,046,061 + MPMX20_00991 0.85 +0.4
1,046,069 - MPMX20_00991 0.86 +0.3
1,046,069 - MPMX20_00991 0.86 +0.8
1,046,075 - MPMX20_00991 0.87 +2.6
1,046,081 + MPMX20_00991 0.88 +0.1
1,046,081 + MPMX20_00991 0.88 +1.0
1,046,086 + MPMX20_00991 0.89 +0.4
1,046,097 + -0.7
1,046,115 + -1.2
1,046,115 + +0.7
1,046,123 - -0.5
1,046,123 - +1.4
1,046,123 - -0.6
1,046,123 - -0.2
1,046,123 - -0.4
1,046,151 + -0.0
1,046,159 - -0.7
1,046,200 - +0.6

Or see this region's nucleotide sequence