Experiment: M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01780 and MPMX20_01781 are separated by 297 nucleotides MPMX20_01781 and MPMX20_01782 are separated by 57 nucleotides
MPMX20_01780: MPMX20_01780 - putative metal-dependent hydrolase YcfH, at 1,871,850 to 1,872,644
_01780
MPMX20_01781: MPMX20_01781 - PTS system glucose-specific EIICB component, at 1,872,942 to 1,874,375
_01781
MPMX20_01782: MPMX20_01782 - FhuE receptor, at 1,874,433 to 1,876,622
_01782
Position (kb)
1872
1873
1874
1875 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1872.140 kb on + strand, within MPMX20_01780 at 1872.140 kb on + strand, within MPMX20_01780 at 1872.140 kb on + strand, within MPMX20_01780 at 1872.184 kb on + strand, within MPMX20_01780 at 1872.306 kb on + strand, within MPMX20_01780 at 1872.314 kb on - strand, within MPMX20_01780 at 1872.314 kb on - strand, within MPMX20_01780 at 1872.395 kb on + strand, within MPMX20_01780 at 1872.395 kb on + strand, within MPMX20_01780 at 1872.403 kb on - strand, within MPMX20_01780 at 1872.513 kb on + strand, within MPMX20_01780 at 1872.521 kb on - strand, within MPMX20_01780 at 1872.526 kb on - strand, within MPMX20_01780 at 1872.531 kb on + strand, within MPMX20_01780 at 1872.548 kb on + strand, within MPMX20_01780 at 1872.556 kb on - strand, within MPMX20_01780 at 1872.570 kb on - strand at 1872.583 kb on - strand at 1872.598 kb on + strand at 1872.608 kb on + strand at 1872.608 kb on + strand at 1872.616 kb on - strand at 1872.616 kb on - strand at 1872.616 kb on - strand at 1872.616 kb on - strand at 1872.700 kb on + strand at 1872.784 kb on - strand at 1872.784 kb on - strand at 1872.862 kb on - strand at 1872.867 kb on - strand at 1872.876 kb on + strand at 1872.876 kb on + strand at 1872.933 kb on + strand at 1872.952 kb on - strand at 1872.995 kb on + strand at 1873.010 kb on + strand at 1873.093 kb on - strand, within MPMX20_01781 at 1873.127 kb on - strand, within MPMX20_01781 at 1873.143 kb on + strand, within MPMX20_01781 at 1873.146 kb on - strand, within MPMX20_01781 at 1873.146 kb on - strand, within MPMX20_01781 at 1873.151 kb on - strand, within MPMX20_01781 at 1873.265 kb on - strand, within MPMX20_01781 at 1873.301 kb on - strand, within MPMX20_01781 at 1873.301 kb on - strand, within MPMX20_01781 at 1873.359 kb on + strand, within MPMX20_01781 at 1873.476 kb on + strand, within MPMX20_01781 at 1873.575 kb on - strand, within MPMX20_01781 at 1873.585 kb on - strand, within MPMX20_01781 at 1873.761 kb on + strand, within MPMX20_01781 at 1873.761 kb on + strand, within MPMX20_01781 at 1873.761 kb on - strand, within MPMX20_01781 at 1873.769 kb on - strand, within MPMX20_01781 at 1873.779 kb on - strand, within MPMX20_01781 at 1873.795 kb on + strand, within MPMX20_01781 at 1873.890 kb on + strand, within MPMX20_01781 at 1873.890 kb on + strand, within MPMX20_01781 at 1873.991 kb on + strand, within MPMX20_01781 at 1874.035 kb on - strand, within MPMX20_01781 at 1874.106 kb on - strand, within MPMX20_01781 at 1874.107 kb on + strand, within MPMX20_01781 at 1874.206 kb on + strand, within MPMX20_01781 at 1874.214 kb on - strand, within MPMX20_01781 at 1874.250 kb on - strand at 1874.379 kb on - strand at 1874.381 kb on + strand at 1874.384 kb on - strand at 1874.384 kb on - strand at 1874.389 kb on - strand at 1874.391 kb on + strand at 1874.391 kb on + strand at 1874.399 kb on - strand at 1874.399 kb on - strand at 1874.485 kb on + strand at 1874.532 kb on + strand at 1874.547 kb on + strand at 1874.591 kb on + strand at 1874.591 kb on + strand at 1874.604 kb on - strand at 1874.604 kb on - strand at 1874.604 kb on - strand at 1874.604 kb on - strand at 1874.606 kb on + strand at 1874.606 kb on + strand at 1874.606 kb on + strand at 1874.606 kb on + strand at 1874.614 kb on - strand at 1874.616 kb on + strand at 1874.616 kb on + strand at 1874.616 kb on + strand at 1874.616 kb on + strand at 1874.624 kb on - strand at 1874.624 kb on - strand at 1874.635 kb on + strand at 1874.637 kb on + strand at 1874.716 kb on + strand, within MPMX20_01782 at 1874.724 kb on - strand, within MPMX20_01782 at 1874.747 kb on + strand, within MPMX20_01782 at 1874.798 kb on + strand, within MPMX20_01782 at 1874.798 kb on + strand, within MPMX20_01782 at 1874.798 kb on + strand, within MPMX20_01782 at 1874.806 kb on - strand, within MPMX20_01782 at 1874.806 kb on - strand, within MPMX20_01782 at 1874.828 kb on + strand, within MPMX20_01782 at 1874.903 kb on + strand, within MPMX20_01782 at 1874.903 kb on + strand, within MPMX20_01782 at 1874.903 kb on + strand, within MPMX20_01782 at 1874.903 kb on + strand, within MPMX20_01782 at 1874.903 kb on + strand, within MPMX20_01782 at 1874.903 kb on + strand, within MPMX20_01782 at 1874.903 kb on + strand, within MPMX20_01782 at 1874.910 kb on + strand, within MPMX20_01782 at 1874.910 kb on + strand, within MPMX20_01782 at 1874.911 kb on - strand, within MPMX20_01782 at 1874.911 kb on - strand, within MPMX20_01782 at 1874.911 kb on - strand, within MPMX20_01782 at 1874.911 kb on - strand, within MPMX20_01782 at 1874.911 kb on - strand, within MPMX20_01782 at 1874.911 kb on - strand, within MPMX20_01782 at 1874.911 kb on - strand, within MPMX20_01782 at 1874.911 kb on - strand, within MPMX20_01782 at 1874.918 kb on - strand, within MPMX20_01782 at 1874.918 kb on - strand, within MPMX20_01782 at 1874.929 kb on + strand, within MPMX20_01782 at 1874.937 kb on - strand, within MPMX20_01782 at 1874.937 kb on - strand, within MPMX20_01782 at 1874.937 kb on - strand, within MPMX20_01782 at 1874.999 kb on + strand, within MPMX20_01782 at 1875.089 kb on - strand, within MPMX20_01782 at 1875.098 kb on - strand, within MPMX20_01782 at 1875.105 kb on + strand, within MPMX20_01782 at 1875.105 kb on + strand, within MPMX20_01782 at 1875.126 kb on - strand, within MPMX20_01782 at 1875.128 kb on + strand, within MPMX20_01782 at 1875.230 kb on + strand, within MPMX20_01782 at 1875.238 kb on - strand, within MPMX20_01782 at 1875.238 kb on - strand, within MPMX20_01782 at 1875.295 kb on - strand, within MPMX20_01782 at 1875.330 kb on - strand, within MPMX20_01782
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,872,140 + MPMX20_01780 0.36 -2.3 1,872,140 + MPMX20_01780 0.36 -1.0 1,872,140 + MPMX20_01780 0.36 -1.3 1,872,184 + MPMX20_01780 0.42 -2.3 1,872,306 + MPMX20_01780 0.57 -0.6 1,872,314 - MPMX20_01780 0.58 -0.4 1,872,314 - MPMX20_01780 0.58 -1.5 1,872,395 + MPMX20_01780 0.69 -0.8 1,872,395 + MPMX20_01780 0.69 -0.2 1,872,403 - MPMX20_01780 0.70 -1.1 1,872,513 + MPMX20_01780 0.83 -0.2 1,872,521 - MPMX20_01780 0.84 -0.0 1,872,526 - MPMX20_01780 0.85 -0.0 1,872,531 + MPMX20_01780 0.86 -3.2 1,872,548 + MPMX20_01780 0.88 +2.1 1,872,556 - MPMX20_01780 0.89 +0.3 1,872,570 - -1.5 1,872,583 - -1.9 1,872,598 + +2.2 1,872,608 + +1.1 1,872,608 + -0.2 1,872,616 - -0.2 1,872,616 - +0.5 1,872,616 - +0.6 1,872,616 - -1.7 1,872,700 + -1.6 1,872,784 - -1.2 1,872,784 - -0.3 1,872,862 - -1.0 1,872,867 - +1.4 1,872,876 + -1.2 1,872,876 + -2.1 1,872,933 + -1.6 1,872,952 - -2.7 1,872,995 + -1.2 1,873,010 + -0.9 1,873,093 - MPMX20_01781 0.11 -0.5 1,873,127 - MPMX20_01781 0.13 -4.2 1,873,143 + MPMX20_01781 0.14 -2.0 1,873,146 - MPMX20_01781 0.14 -0.5 1,873,146 - MPMX20_01781 0.14 -0.6 1,873,151 - MPMX20_01781 0.15 -1.8 1,873,265 - MPMX20_01781 0.23 -2.4 1,873,301 - MPMX20_01781 0.25 +1.1 1,873,301 - MPMX20_01781 0.25 -0.9 1,873,359 + MPMX20_01781 0.29 -1.1 1,873,476 + MPMX20_01781 0.37 -2.2 1,873,575 - MPMX20_01781 0.44 +0.1 1,873,585 - MPMX20_01781 0.45 +1.1 1,873,761 + MPMX20_01781 0.57 -2.4 1,873,761 + MPMX20_01781 0.57 -0.9 1,873,761 - MPMX20_01781 0.57 -3.0 1,873,769 - MPMX20_01781 0.58 -0.5 1,873,779 - MPMX20_01781 0.58 +1.1 1,873,795 + MPMX20_01781 0.59 -0.9 1,873,890 + MPMX20_01781 0.66 -1.8 1,873,890 + MPMX20_01781 0.66 -0.9 1,873,991 + MPMX20_01781 0.73 +2.1 1,874,035 - MPMX20_01781 0.76 +0.5 1,874,106 - MPMX20_01781 0.81 -0.7 1,874,107 + MPMX20_01781 0.81 -1.2 1,874,206 + MPMX20_01781 0.88 -1.6 1,874,214 - MPMX20_01781 0.89 +2.1 1,874,250 - +0.7 1,874,379 - +0.4 1,874,381 + -0.0 1,874,384 - -0.9 1,874,384 - -1.7 1,874,389 - -0.2 1,874,391 + -2.3 1,874,391 + -1.0 1,874,399 - +1.0 1,874,399 - +1.5 1,874,485 + +1.1 1,874,532 + +0.6 1,874,547 + -0.3 1,874,591 + +2.4 1,874,591 + -1.5 1,874,604 - -3.4 1,874,604 - -1.6 1,874,604 - +1.1 1,874,604 - -3.0 1,874,606 + -3.2 1,874,606 + -2.0 1,874,606 + +1.5 1,874,606 + -0.7 1,874,614 - -0.8 1,874,616 + -0.2 1,874,616 + -0.7 1,874,616 + +0.1 1,874,616 + -0.6 1,874,624 - -0.6 1,874,624 - +2.1 1,874,635 + -0.1 1,874,637 + +0.1 1,874,716 + MPMX20_01782 0.13 -0.0 1,874,724 - MPMX20_01782 0.13 +0.2 1,874,747 + MPMX20_01782 0.14 -0.3 1,874,798 + MPMX20_01782 0.17 +0.1 1,874,798 + MPMX20_01782 0.17 -1.4 1,874,798 + MPMX20_01782 0.17 +2.1 1,874,806 - MPMX20_01782 0.17 +0.2 1,874,806 - MPMX20_01782 0.17 +2.6 1,874,828 + MPMX20_01782 0.18 -0.9 1,874,903 + MPMX20_01782 0.21 +1.1 1,874,903 + MPMX20_01782 0.21 -0.5 1,874,903 + MPMX20_01782 0.21 -1.0 1,874,903 + MPMX20_01782 0.21 -1.8 1,874,903 + MPMX20_01782 0.21 -0.2 1,874,903 + MPMX20_01782 0.21 -0.3 1,874,903 + MPMX20_01782 0.21 -0.9 1,874,910 + MPMX20_01782 0.22 +0.6 1,874,910 + MPMX20_01782 0.22 -1.1 1,874,911 - MPMX20_01782 0.22 -0.2 1,874,911 - MPMX20_01782 0.22 -0.9 1,874,911 - MPMX20_01782 0.22 -2.9 1,874,911 - MPMX20_01782 0.22 -1.4 1,874,911 - MPMX20_01782 0.22 -0.9 1,874,911 - MPMX20_01782 0.22 -1.5 1,874,911 - MPMX20_01782 0.22 -1.0 1,874,911 - MPMX20_01782 0.22 -0.2 1,874,918 - MPMX20_01782 0.22 +1.1 1,874,918 - MPMX20_01782 0.22 -1.2 1,874,929 + MPMX20_01782 0.23 -1.9 1,874,937 - MPMX20_01782 0.23 +1.3 1,874,937 - MPMX20_01782 0.23 +0.1 1,874,937 - MPMX20_01782 0.23 +1.9 1,874,999 + MPMX20_01782 0.26 -1.4 1,875,089 - MPMX20_01782 0.30 -0.2 1,875,098 - MPMX20_01782 0.30 -1.7 1,875,105 + MPMX20_01782 0.31 +1.0 1,875,105 + MPMX20_01782 0.31 -0.9 1,875,126 - MPMX20_01782 0.32 -1.7 1,875,128 + MPMX20_01782 0.32 +1.5 1,875,230 + MPMX20_01782 0.36 -0.5 1,875,238 - MPMX20_01782 0.37 +0.6 1,875,238 - MPMX20_01782 0.37 +2.1 1,875,295 - MPMX20_01782 0.39 +1.1 1,875,330 - MPMX20_01782 0.41 -0.6
Or see this region's nucleotide sequence