Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01781

Experiment: M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01780 and MPMX20_01781 are separated by 297 nucleotidesMPMX20_01781 and MPMX20_01782 are separated by 57 nucleotides MPMX20_01780: MPMX20_01780 - putative metal-dependent hydrolase YcfH, at 1,871,850 to 1,872,644 _01780 MPMX20_01781: MPMX20_01781 - PTS system glucose-specific EIICB component, at 1,872,942 to 1,874,375 _01781 MPMX20_01782: MPMX20_01782 - FhuE receptor, at 1,874,433 to 1,876,622 _01782 Position (kb) 1872 1873 1874 1875Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1872.140 kb on + strand, within MPMX20_01780at 1872.140 kb on + strand, within MPMX20_01780at 1872.140 kb on + strand, within MPMX20_01780at 1872.184 kb on + strand, within MPMX20_01780at 1872.306 kb on + strand, within MPMX20_01780at 1872.314 kb on - strand, within MPMX20_01780at 1872.314 kb on - strand, within MPMX20_01780at 1872.395 kb on + strand, within MPMX20_01780at 1872.395 kb on + strand, within MPMX20_01780at 1872.403 kb on - strand, within MPMX20_01780at 1872.513 kb on + strand, within MPMX20_01780at 1872.521 kb on - strand, within MPMX20_01780at 1872.526 kb on - strand, within MPMX20_01780at 1872.531 kb on + strand, within MPMX20_01780at 1872.548 kb on + strand, within MPMX20_01780at 1872.556 kb on - strand, within MPMX20_01780at 1872.570 kb on - strandat 1872.583 kb on - strandat 1872.598 kb on + strandat 1872.608 kb on + strandat 1872.608 kb on + strandat 1872.616 kb on - strandat 1872.616 kb on - strandat 1872.616 kb on - strandat 1872.616 kb on - strandat 1872.700 kb on + strandat 1872.784 kb on - strandat 1872.784 kb on - strandat 1872.862 kb on - strandat 1872.867 kb on - strandat 1872.876 kb on + strandat 1872.876 kb on + strandat 1872.933 kb on + strandat 1872.952 kb on - strandat 1872.995 kb on + strandat 1873.010 kb on + strandat 1873.093 kb on - strand, within MPMX20_01781at 1873.127 kb on - strand, within MPMX20_01781at 1873.143 kb on + strand, within MPMX20_01781at 1873.146 kb on - strand, within MPMX20_01781at 1873.146 kb on - strand, within MPMX20_01781at 1873.151 kb on - strand, within MPMX20_01781at 1873.265 kb on - strand, within MPMX20_01781at 1873.301 kb on - strand, within MPMX20_01781at 1873.301 kb on - strand, within MPMX20_01781at 1873.359 kb on + strand, within MPMX20_01781at 1873.476 kb on + strand, within MPMX20_01781at 1873.575 kb on - strand, within MPMX20_01781at 1873.585 kb on - strand, within MPMX20_01781at 1873.761 kb on + strand, within MPMX20_01781at 1873.761 kb on + strand, within MPMX20_01781at 1873.761 kb on - strand, within MPMX20_01781at 1873.769 kb on - strand, within MPMX20_01781at 1873.779 kb on - strand, within MPMX20_01781at 1873.795 kb on + strand, within MPMX20_01781at 1873.890 kb on + strand, within MPMX20_01781at 1873.890 kb on + strand, within MPMX20_01781at 1873.991 kb on + strand, within MPMX20_01781at 1874.035 kb on - strand, within MPMX20_01781at 1874.106 kb on - strand, within MPMX20_01781at 1874.107 kb on + strand, within MPMX20_01781at 1874.206 kb on + strand, within MPMX20_01781at 1874.214 kb on - strand, within MPMX20_01781at 1874.250 kb on - strandat 1874.379 kb on - strandat 1874.381 kb on + strandat 1874.384 kb on - strandat 1874.384 kb on - strandat 1874.389 kb on - strandat 1874.391 kb on + strandat 1874.391 kb on + strandat 1874.399 kb on - strandat 1874.399 kb on - strandat 1874.485 kb on + strandat 1874.532 kb on + strandat 1874.547 kb on + strandat 1874.591 kb on + strandat 1874.591 kb on + strandat 1874.604 kb on - strandat 1874.604 kb on - strandat 1874.604 kb on - strandat 1874.604 kb on - strandat 1874.606 kb on + strandat 1874.606 kb on + strandat 1874.606 kb on + strandat 1874.606 kb on + strandat 1874.614 kb on - strandat 1874.616 kb on + strandat 1874.616 kb on + strandat 1874.616 kb on + strandat 1874.616 kb on + strandat 1874.624 kb on - strandat 1874.624 kb on - strandat 1874.635 kb on + strandat 1874.637 kb on + strandat 1874.716 kb on + strand, within MPMX20_01782at 1874.724 kb on - strand, within MPMX20_01782at 1874.747 kb on + strand, within MPMX20_01782at 1874.798 kb on + strand, within MPMX20_01782at 1874.798 kb on + strand, within MPMX20_01782at 1874.798 kb on + strand, within MPMX20_01782at 1874.806 kb on - strand, within MPMX20_01782at 1874.806 kb on - strand, within MPMX20_01782at 1874.828 kb on + strand, within MPMX20_01782at 1874.903 kb on + strand, within MPMX20_01782at 1874.903 kb on + strand, within MPMX20_01782at 1874.903 kb on + strand, within MPMX20_01782at 1874.903 kb on + strand, within MPMX20_01782at 1874.903 kb on + strand, within MPMX20_01782at 1874.903 kb on + strand, within MPMX20_01782at 1874.903 kb on + strand, within MPMX20_01782at 1874.910 kb on + strand, within MPMX20_01782at 1874.910 kb on + strand, within MPMX20_01782at 1874.911 kb on - strand, within MPMX20_01782at 1874.911 kb on - strand, within MPMX20_01782at 1874.911 kb on - strand, within MPMX20_01782at 1874.911 kb on - strand, within MPMX20_01782at 1874.911 kb on - strand, within MPMX20_01782at 1874.911 kb on - strand, within MPMX20_01782at 1874.911 kb on - strand, within MPMX20_01782at 1874.911 kb on - strand, within MPMX20_01782at 1874.918 kb on - strand, within MPMX20_01782at 1874.918 kb on - strand, within MPMX20_01782at 1874.929 kb on + strand, within MPMX20_01782at 1874.937 kb on - strand, within MPMX20_01782at 1874.937 kb on - strand, within MPMX20_01782at 1874.937 kb on - strand, within MPMX20_01782at 1874.999 kb on + strand, within MPMX20_01782at 1875.089 kb on - strand, within MPMX20_01782at 1875.098 kb on - strand, within MPMX20_01782at 1875.105 kb on + strand, within MPMX20_01782at 1875.105 kb on + strand, within MPMX20_01782at 1875.126 kb on - strand, within MPMX20_01782at 1875.128 kb on + strand, within MPMX20_01782at 1875.230 kb on + strand, within MPMX20_01782at 1875.238 kb on - strand, within MPMX20_01782at 1875.238 kb on - strand, within MPMX20_01782at 1875.295 kb on - strand, within MPMX20_01782at 1875.330 kb on - strand, within MPMX20_01782

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,872,140 + MPMX20_01780 0.36 -2.3
1,872,140 + MPMX20_01780 0.36 -1.0
1,872,140 + MPMX20_01780 0.36 -1.3
1,872,184 + MPMX20_01780 0.42 -2.3
1,872,306 + MPMX20_01780 0.57 -0.6
1,872,314 - MPMX20_01780 0.58 -0.4
1,872,314 - MPMX20_01780 0.58 -1.5
1,872,395 + MPMX20_01780 0.69 -0.8
1,872,395 + MPMX20_01780 0.69 -0.2
1,872,403 - MPMX20_01780 0.70 -1.1
1,872,513 + MPMX20_01780 0.83 -0.2
1,872,521 - MPMX20_01780 0.84 -0.0
1,872,526 - MPMX20_01780 0.85 -0.0
1,872,531 + MPMX20_01780 0.86 -3.2
1,872,548 + MPMX20_01780 0.88 +2.1
1,872,556 - MPMX20_01780 0.89 +0.3
1,872,570 - -1.5
1,872,583 - -1.9
1,872,598 + +2.2
1,872,608 + +1.1
1,872,608 + -0.2
1,872,616 - -0.2
1,872,616 - +0.5
1,872,616 - +0.6
1,872,616 - -1.7
1,872,700 + -1.6
1,872,784 - -1.2
1,872,784 - -0.3
1,872,862 - -1.0
1,872,867 - +1.4
1,872,876 + -1.2
1,872,876 + -2.1
1,872,933 + -1.6
1,872,952 - -2.7
1,872,995 + -1.2
1,873,010 + -0.9
1,873,093 - MPMX20_01781 0.11 -0.5
1,873,127 - MPMX20_01781 0.13 -4.2
1,873,143 + MPMX20_01781 0.14 -2.0
1,873,146 - MPMX20_01781 0.14 -0.5
1,873,146 - MPMX20_01781 0.14 -0.6
1,873,151 - MPMX20_01781 0.15 -1.8
1,873,265 - MPMX20_01781 0.23 -2.4
1,873,301 - MPMX20_01781 0.25 +1.1
1,873,301 - MPMX20_01781 0.25 -0.9
1,873,359 + MPMX20_01781 0.29 -1.1
1,873,476 + MPMX20_01781 0.37 -2.2
1,873,575 - MPMX20_01781 0.44 +0.1
1,873,585 - MPMX20_01781 0.45 +1.1
1,873,761 + MPMX20_01781 0.57 -2.4
1,873,761 + MPMX20_01781 0.57 -0.9
1,873,761 - MPMX20_01781 0.57 -3.0
1,873,769 - MPMX20_01781 0.58 -0.5
1,873,779 - MPMX20_01781 0.58 +1.1
1,873,795 + MPMX20_01781 0.59 -0.9
1,873,890 + MPMX20_01781 0.66 -1.8
1,873,890 + MPMX20_01781 0.66 -0.9
1,873,991 + MPMX20_01781 0.73 +2.1
1,874,035 - MPMX20_01781 0.76 +0.5
1,874,106 - MPMX20_01781 0.81 -0.7
1,874,107 + MPMX20_01781 0.81 -1.2
1,874,206 + MPMX20_01781 0.88 -1.6
1,874,214 - MPMX20_01781 0.89 +2.1
1,874,250 - +0.7
1,874,379 - +0.4
1,874,381 + -0.0
1,874,384 - -0.9
1,874,384 - -1.7
1,874,389 - -0.2
1,874,391 + -2.3
1,874,391 + -1.0
1,874,399 - +1.0
1,874,399 - +1.5
1,874,485 + +1.1
1,874,532 + +0.6
1,874,547 + -0.3
1,874,591 + +2.4
1,874,591 + -1.5
1,874,604 - -3.4
1,874,604 - -1.6
1,874,604 - +1.1
1,874,604 - -3.0
1,874,606 + -3.2
1,874,606 + -2.0
1,874,606 + +1.5
1,874,606 + -0.7
1,874,614 - -0.8
1,874,616 + -0.2
1,874,616 + -0.7
1,874,616 + +0.1
1,874,616 + -0.6
1,874,624 - -0.6
1,874,624 - +2.1
1,874,635 + -0.1
1,874,637 + +0.1
1,874,716 + MPMX20_01782 0.13 -0.0
1,874,724 - MPMX20_01782 0.13 +0.2
1,874,747 + MPMX20_01782 0.14 -0.3
1,874,798 + MPMX20_01782 0.17 +0.1
1,874,798 + MPMX20_01782 0.17 -1.4
1,874,798 + MPMX20_01782 0.17 +2.1
1,874,806 - MPMX20_01782 0.17 +0.2
1,874,806 - MPMX20_01782 0.17 +2.6
1,874,828 + MPMX20_01782 0.18 -0.9
1,874,903 + MPMX20_01782 0.21 +1.1
1,874,903 + MPMX20_01782 0.21 -0.5
1,874,903 + MPMX20_01782 0.21 -1.0
1,874,903 + MPMX20_01782 0.21 -1.8
1,874,903 + MPMX20_01782 0.21 -0.2
1,874,903 + MPMX20_01782 0.21 -0.3
1,874,903 + MPMX20_01782 0.21 -0.9
1,874,910 + MPMX20_01782 0.22 +0.6
1,874,910 + MPMX20_01782 0.22 -1.1
1,874,911 - MPMX20_01782 0.22 -0.2
1,874,911 - MPMX20_01782 0.22 -0.9
1,874,911 - MPMX20_01782 0.22 -2.9
1,874,911 - MPMX20_01782 0.22 -1.4
1,874,911 - MPMX20_01782 0.22 -0.9
1,874,911 - MPMX20_01782 0.22 -1.5
1,874,911 - MPMX20_01782 0.22 -1.0
1,874,911 - MPMX20_01782 0.22 -0.2
1,874,918 - MPMX20_01782 0.22 +1.1
1,874,918 - MPMX20_01782 0.22 -1.2
1,874,929 + MPMX20_01782 0.23 -1.9
1,874,937 - MPMX20_01782 0.23 +1.3
1,874,937 - MPMX20_01782 0.23 +0.1
1,874,937 - MPMX20_01782 0.23 +1.9
1,874,999 + MPMX20_01782 0.26 -1.4
1,875,089 - MPMX20_01782 0.30 -0.2
1,875,098 - MPMX20_01782 0.30 -1.7
1,875,105 + MPMX20_01782 0.31 +1.0
1,875,105 + MPMX20_01782 0.31 -0.9
1,875,126 - MPMX20_01782 0.32 -1.7
1,875,128 + MPMX20_01782 0.32 +1.5
1,875,230 + MPMX20_01782 0.36 -0.5
1,875,238 - MPMX20_01782 0.37 +0.6
1,875,238 - MPMX20_01782 0.37 +2.1
1,875,295 - MPMX20_01782 0.39 +1.1
1,875,330 - MPMX20_01782 0.41 -0.6

Or see this region's nucleotide sequence