Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01225

Experiment: M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01224 and MPMX20_01225 are separated by 20 nucleotidesMPMX20_01225 and MPMX20_01226 are separated by 131 nucleotidesMPMX20_01226 and MPMX20_01227 are separated by 163 nucleotides MPMX20_01224: MPMX20_01224 - Acetolactate synthase, catabolic, at 1,280,386 to 1,282,065 _01224 MPMX20_01225: MPMX20_01225 - Diacetyl reductase [(S)-acetoin forming], at 1,282,086 to 1,282,856 _01225 MPMX20_01226: MPMX20_01226 - hypothetical protein, at 1,282,988 to 1,283,461 _01226 MPMX20_01227: MPMX20_01227 - hypothetical protein, at 1,283,625 to 1,284,323 _01227 Position (kb) 1282 1283Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8at 1281.107 kb on - strand, within MPMX20_01224at 1281.195 kb on - strand, within MPMX20_01224at 1281.206 kb on - strand, within MPMX20_01224at 1281.245 kb on + strand, within MPMX20_01224at 1281.294 kb on - strand, within MPMX20_01224at 1281.316 kb on - strand, within MPMX20_01224at 1281.343 kb on - strand, within MPMX20_01224at 1281.354 kb on - strand, within MPMX20_01224at 1281.365 kb on + strand, within MPMX20_01224at 1281.373 kb on - strand, within MPMX20_01224at 1281.398 kb on + strand, within MPMX20_01224at 1281.406 kb on - strand, within MPMX20_01224at 1281.406 kb on - strand, within MPMX20_01224at 1281.406 kb on - strand, within MPMX20_01224at 1281.406 kb on - strand, within MPMX20_01224at 1281.598 kb on + strand, within MPMX20_01224at 1281.598 kb on + strand, within MPMX20_01224at 1281.638 kb on - strand, within MPMX20_01224at 1281.638 kb on - strand, within MPMX20_01224at 1281.640 kb on + strand, within MPMX20_01224at 1281.671 kb on - strand, within MPMX20_01224at 1281.694 kb on + strand, within MPMX20_01224at 1281.695 kb on - strand, within MPMX20_01224at 1281.749 kb on - strand, within MPMX20_01224at 1281.749 kb on - strand, within MPMX20_01224at 1281.753 kb on + strand, within MPMX20_01224at 1281.800 kb on + strand, within MPMX20_01224at 1281.865 kb on + strand, within MPMX20_01224at 1281.950 kb on + strandat 1281.958 kb on - strandat 1281.958 kb on - strandat 1282.049 kb on - strandat 1282.110 kb on + strandat 1282.110 kb on + strandat 1282.111 kb on + strandat 1282.116 kb on + strandat 1282.116 kb on + strandat 1282.116 kb on + strandat 1282.116 kb on + strandat 1282.118 kb on - strandat 1282.124 kb on - strandat 1282.182 kb on + strand, within MPMX20_01225at 1282.311 kb on + strand, within MPMX20_01225at 1282.311 kb on + strand, within MPMX20_01225at 1282.314 kb on - strand, within MPMX20_01225at 1282.314 kb on - strand, within MPMX20_01225at 1282.389 kb on - strand, within MPMX20_01225at 1282.435 kb on - strand, within MPMX20_01225at 1282.522 kb on + strand, within MPMX20_01225at 1282.567 kb on + strand, within MPMX20_01225at 1282.567 kb on + strand, within MPMX20_01225at 1282.575 kb on - strand, within MPMX20_01225at 1282.734 kb on + strand, within MPMX20_01225at 1282.800 kb on - strandat 1282.837 kb on + strandat 1282.837 kb on + strandat 1282.837 kb on + strandat 1282.845 kb on - strandat 1282.886 kb on - strandat 1282.898 kb on - strandat 1282.898 kb on - strandat 1282.930 kb on + strandat 1282.930 kb on + strandat 1282.930 kb on + strandat 1282.930 kb on + strandat 1282.930 kb on + strandat 1282.930 kb on + strandat 1282.930 kb on + strandat 1282.930 kb on + strandat 1282.930 kb on + strandat 1282.938 kb on - strandat 1282.938 kb on - strandat 1282.938 kb on - strandat 1282.938 kb on - strandat 1282.938 kb on - strandat 1282.943 kb on - strandat 1282.983 kb on - strandat 1282.985 kb on + strandat 1282.985 kb on - strandat 1282.993 kb on - strandat 1283.018 kb on + strandat 1283.018 kb on + strandat 1283.088 kb on + strand, within MPMX20_01226at 1283.096 kb on - strand, within MPMX20_01226at 1283.096 kb on - strand, within MPMX20_01226at 1283.096 kb on - strand, within MPMX20_01226at 1283.096 kb on - strand, within MPMX20_01226at 1283.121 kb on + strand, within MPMX20_01226at 1283.122 kb on - strand, within MPMX20_01226at 1283.191 kb on + strand, within MPMX20_01226at 1283.191 kb on + strand, within MPMX20_01226at 1283.199 kb on - strand, within MPMX20_01226at 1283.207 kb on - strand, within MPMX20_01226at 1283.250 kb on + strand, within MPMX20_01226at 1283.302 kb on - strand, within MPMX20_01226at 1283.307 kb on - strand, within MPMX20_01226at 1283.372 kb on + strand, within MPMX20_01226at 1283.447 kb on - strandat 1283.593 kb on + strandat 1283.607 kb on - strandat 1283.607 kb on - strandat 1283.632 kb on + strandat 1283.720 kb on + strand, within MPMX20_01227at 1283.720 kb on + strand, within MPMX20_01227at 1283.728 kb on - strand, within MPMX20_01227at 1283.728 kb on - strand, within MPMX20_01227at 1283.774 kb on + strand, within MPMX20_01227at 1283.833 kb on + strand, within MPMX20_01227at 1283.833 kb on + strand, within MPMX20_01227at 1283.841 kb on - strand, within MPMX20_01227at 1283.845 kb on + strand, within MPMX20_01227

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,281,107 - MPMX20_01224 0.43 +0.1
1,281,195 - MPMX20_01224 0.48 +0.1
1,281,206 - MPMX20_01224 0.49 +1.1
1,281,245 + MPMX20_01224 0.51 +0.2
1,281,294 - MPMX20_01224 0.54 +0.6
1,281,316 - MPMX20_01224 0.55 -1.2
1,281,343 - MPMX20_01224 0.57 -1.0
1,281,354 - MPMX20_01224 0.58 -0.0
1,281,365 + MPMX20_01224 0.58 -1.5
1,281,373 - MPMX20_01224 0.59 +0.2
1,281,398 + MPMX20_01224 0.60 -0.5
1,281,406 - MPMX20_01224 0.61 +0.5
1,281,406 - MPMX20_01224 0.61 +0.3
1,281,406 - MPMX20_01224 0.61 -0.5
1,281,406 - MPMX20_01224 0.61 -1.6
1,281,598 + MPMX20_01224 0.72 -1.2
1,281,598 + MPMX20_01224 0.72 -0.1
1,281,638 - MPMX20_01224 0.75 -0.6
1,281,638 - MPMX20_01224 0.75 -0.8
1,281,640 + MPMX20_01224 0.75 +0.7
1,281,671 - MPMX20_01224 0.76 -0.9
1,281,694 + MPMX20_01224 0.78 -0.5
1,281,695 - MPMX20_01224 0.78 -1.8
1,281,749 - MPMX20_01224 0.81 -0.9
1,281,749 - MPMX20_01224 0.81 -0.3
1,281,753 + MPMX20_01224 0.81 -0.5
1,281,800 + MPMX20_01224 0.84 -0.6
1,281,865 + MPMX20_01224 0.88 -0.2
1,281,950 + -1.5
1,281,958 - -1.5
1,281,958 - -2.6
1,282,049 - +0.9
1,282,110 + -0.9
1,282,110 + +1.1
1,282,111 + -0.4
1,282,116 + +0.1
1,282,116 + +1.8
1,282,116 + -1.6
1,282,116 + -2.0
1,282,118 - +0.7
1,282,124 - +0.0
1,282,182 + MPMX20_01225 0.12 -0.7
1,282,311 + MPMX20_01225 0.29 -1.4
1,282,311 + MPMX20_01225 0.29 -1.0
1,282,314 - MPMX20_01225 0.30 -1.2
1,282,314 - MPMX20_01225 0.30 -0.5
1,282,389 - MPMX20_01225 0.39 -0.5
1,282,435 - MPMX20_01225 0.45 -0.9
1,282,522 + MPMX20_01225 0.57 -2.0
1,282,567 + MPMX20_01225 0.62 -0.4
1,282,567 + MPMX20_01225 0.62 +1.2
1,282,575 - MPMX20_01225 0.63 +2.1
1,282,734 + MPMX20_01225 0.84 +8.2
1,282,800 - +3.3
1,282,837 + +0.0
1,282,837 + -1.3
1,282,837 + -3.0
1,282,845 - -0.7
1,282,886 - -0.3
1,282,898 - -1.2
1,282,898 - -1.3
1,282,930 + -1.5
1,282,930 + -1.5
1,282,930 + +0.1
1,282,930 + -0.9
1,282,930 + -0.9
1,282,930 + -0.6
1,282,930 + +0.7
1,282,930 + +0.2
1,282,930 + +0.5
1,282,938 - +0.2
1,282,938 - +0.2
1,282,938 - +1.1
1,282,938 - -0.0
1,282,938 - +1.4
1,282,943 - +1.1
1,282,983 - -0.3
1,282,985 + +0.1
1,282,985 - +0.2
1,282,993 - -0.7
1,283,018 + -0.3
1,283,018 + +0.8
1,283,088 + MPMX20_01226 0.21 -1.1
1,283,096 - MPMX20_01226 0.23 +0.4
1,283,096 - MPMX20_01226 0.23 +0.6
1,283,096 - MPMX20_01226 0.23 -0.7
1,283,096 - MPMX20_01226 0.23 +1.5
1,283,121 + MPMX20_01226 0.28 +0.7
1,283,122 - MPMX20_01226 0.28 -0.8
1,283,191 + MPMX20_01226 0.43 -2.5
1,283,191 + MPMX20_01226 0.43 -2.4
1,283,199 - MPMX20_01226 0.45 +0.9
1,283,207 - MPMX20_01226 0.46 -0.3
1,283,250 + MPMX20_01226 0.55 +0.2
1,283,302 - MPMX20_01226 0.66 -1.7
1,283,307 - MPMX20_01226 0.67 -0.5
1,283,372 + MPMX20_01226 0.81 +1.1
1,283,447 - +0.2
1,283,593 + +0.4
1,283,607 - -1.6
1,283,607 - +1.0
1,283,632 + -2.7
1,283,720 + MPMX20_01227 0.14 -2.2
1,283,720 + MPMX20_01227 0.14 +0.4
1,283,728 - MPMX20_01227 0.15 +3.3
1,283,728 - MPMX20_01227 0.15 +3.7
1,283,774 + MPMX20_01227 0.21 +1.1
1,283,833 + MPMX20_01227 0.30 +1.1
1,283,833 + MPMX20_01227 0.30 -0.9
1,283,841 - MPMX20_01227 0.31 -1.5
1,283,845 + MPMX20_01227 0.31 -1.0

Or see this region's nucleotide sequence