Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00342

Experiment: M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00339 and MPMX20_00340 are separated by 22 nucleotidesMPMX20_00340 and MPMX20_00341 are separated by 20 nucleotidesMPMX20_00341 and MPMX20_00342 are separated by 11 nucleotidesMPMX20_00342 and MPMX20_00343 are separated by 337 nucleotides MPMX20_00339: MPMX20_00339 - Cytoskeleton bundling-enhancing antitoxin CbeA, at 359,924 to 360,289 _00339 MPMX20_00340: MPMX20_00340 - hypothetical protein, at 360,312 to 360,533 _00340 MPMX20_00341: MPMX20_00341 - hypothetical protein, at 360,554 to 361,033 _00341 MPMX20_00342: MPMX20_00342 - Antirestriction protein KlcA, at 361,045 to 361,524 _00342 MPMX20_00343: MPMX20_00343 - hypothetical protein, at 361,862 to 362,680 _00343 Position (kb) 361 362Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 360.048 kb on + strand, within MPMX20_00339at 360.048 kb on + strand, within MPMX20_00339at 360.056 kb on - strand, within MPMX20_00339at 360.061 kb on - strand, within MPMX20_00339at 360.079 kb on + strand, within MPMX20_00339at 360.127 kb on - strand, within MPMX20_00339at 360.127 kb on - strand, within MPMX20_00339at 360.132 kb on - strand, within MPMX20_00339at 360.132 kb on - strand, within MPMX20_00339at 360.188 kb on + strand, within MPMX20_00339at 360.213 kb on - strand, within MPMX20_00339at 360.248 kb on - strand, within MPMX20_00339at 360.250 kb on - strand, within MPMX20_00339at 360.266 kb on + strandat 360.266 kb on + strandat 360.271 kb on + strandat 360.299 kb on + strandat 360.299 kb on + strandat 360.307 kb on - strandat 360.307 kb on - strandat 360.307 kb on - strandat 360.320 kb on + strandat 360.320 kb on + strandat 360.328 kb on - strandat 360.328 kb on - strandat 360.328 kb on - strandat 360.328 kb on - strandat 360.338 kb on - strand, within MPMX20_00340at 360.399 kb on + strand, within MPMX20_00340at 360.407 kb on - strand, within MPMX20_00340at 360.495 kb on + strand, within MPMX20_00340at 360.503 kb on - strand, within MPMX20_00340at 360.507 kb on + strand, within MPMX20_00340at 360.515 kb on - strandat 360.593 kb on - strandat 360.601 kb on + strandat 360.601 kb on + strandat 360.609 kb on - strand, within MPMX20_00341at 360.609 kb on - strand, within MPMX20_00341at 360.623 kb on + strand, within MPMX20_00341at 360.658 kb on + strand, within MPMX20_00341at 360.658 kb on + strand, within MPMX20_00341at 360.675 kb on + strand, within MPMX20_00341at 360.683 kb on - strand, within MPMX20_00341at 360.704 kb on - strand, within MPMX20_00341at 360.710 kb on - strand, within MPMX20_00341at 360.750 kb on + strand, within MPMX20_00341at 360.750 kb on + strand, within MPMX20_00341at 360.758 kb on - strand, within MPMX20_00341at 360.758 kb on - strand, within MPMX20_00341at 360.769 kb on + strand, within MPMX20_00341at 360.777 kb on - strand, within MPMX20_00341at 360.777 kb on - strand, within MPMX20_00341at 360.856 kb on + strand, within MPMX20_00341at 360.906 kb on + strand, within MPMX20_00341at 360.958 kb on + strand, within MPMX20_00341at 360.958 kb on + strand, within MPMX20_00341at 360.959 kb on + strand, within MPMX20_00341at 360.959 kb on + strand, within MPMX20_00341at 360.959 kb on + strand, within MPMX20_00341at 360.967 kb on - strand, within MPMX20_00341at 360.967 kb on - strand, within MPMX20_00341at 361.013 kb on + strandat 361.035 kb on + strandat 361.036 kb on + strandat 361.044 kb on - strandat 361.072 kb on + strandat 361.072 kb on + strandat 361.112 kb on - strand, within MPMX20_00342at 361.164 kb on + strand, within MPMX20_00342at 361.203 kb on + strand, within MPMX20_00342at 361.203 kb on + strand, within MPMX20_00342at 361.204 kb on - strand, within MPMX20_00342at 361.226 kb on + strand, within MPMX20_00342at 361.226 kb on + strand, within MPMX20_00342at 361.234 kb on - strand, within MPMX20_00342at 361.234 kb on - strand, within MPMX20_00342at 361.234 kb on - strand, within MPMX20_00342at 361.234 kb on - strand, within MPMX20_00342at 361.295 kb on + strand, within MPMX20_00342at 361.295 kb on + strand, within MPMX20_00342at 361.370 kb on - strand, within MPMX20_00342at 361.396 kb on + strand, within MPMX20_00342at 361.491 kb on + strandat 361.593 kb on + strandat 361.640 kb on - strandat 361.651 kb on - strandat 361.665 kb on + strandat 361.665 kb on + strandat 361.665 kb on + strandat 361.673 kb on - strandat 361.695 kb on - strandat 361.861 kb on - strandat 361.885 kb on - strandat 361.910 kb on + strandat 361.949 kb on + strand, within MPMX20_00343at 361.959 kb on + strand, within MPMX20_00343at 361.959 kb on + strand, within MPMX20_00343at 361.959 kb on + strand, within MPMX20_00343at 361.967 kb on - strand, within MPMX20_00343at 361.967 kb on - strand, within MPMX20_00343at 361.967 kb on - strand, within MPMX20_00343at 362.025 kb on + strand, within MPMX20_00343at 362.059 kb on + strand, within MPMX20_00343at 362.127 kb on + strand, within MPMX20_00343at 362.135 kb on - strand, within MPMX20_00343at 362.184 kb on + strand, within MPMX20_00343at 362.276 kb on - strand, within MPMX20_00343at 362.278 kb on + strand, within MPMX20_00343at 362.283 kb on - strand, within MPMX20_00343at 362.358 kb on - strand, within MPMX20_00343at 362.375 kb on - strand, within MPMX20_00343at 362.405 kb on + strand, within MPMX20_00343at 362.413 kb on - strand, within MPMX20_00343at 362.413 kb on - strand, within MPMX20_00343at 362.445 kb on - strand, within MPMX20_00343at 362.451 kb on + strand, within MPMX20_00343at 362.451 kb on + strand, within MPMX20_00343at 362.451 kb on + strand, within MPMX20_00343

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
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360,048 + MPMX20_00339 0.34 +1.9
360,048 + MPMX20_00339 0.34 -0.4
360,056 - MPMX20_00339 0.36 -1.4
360,061 - MPMX20_00339 0.37 +1.9
360,079 + MPMX20_00339 0.42 -0.8
360,127 - MPMX20_00339 0.55 +0.9
360,127 - MPMX20_00339 0.55 -1.0
360,132 - MPMX20_00339 0.57 +0.1
360,132 - MPMX20_00339 0.57 -0.4
360,188 + MPMX20_00339 0.72 +0.5
360,213 - MPMX20_00339 0.79 -3.0
360,248 - MPMX20_00339 0.89 -0.4
360,250 - MPMX20_00339 0.89 -0.0
360,266 + +0.3
360,266 + +2.6
360,271 + +0.4
360,299 + +0.8
360,299 + -0.9
360,307 - +0.1
360,307 - -0.2
360,307 - -0.7
360,320 + -0.0
360,320 + +0.2
360,328 - -0.2
360,328 - -0.8
360,328 - +0.5
360,328 - +1.1
360,338 - MPMX20_00340 0.12 +0.7
360,399 + MPMX20_00340 0.39 +0.3
360,407 - MPMX20_00340 0.43 +0.3
360,495 + MPMX20_00340 0.82 +1.5
360,503 - MPMX20_00340 0.86 -1.2
360,507 + MPMX20_00340 0.88 +1.6
360,515 - -2.2
360,593 - -0.3
360,601 + +0.4
360,601 + +1.1
360,609 - MPMX20_00341 0.11 +0.8
360,609 - MPMX20_00341 0.11 +1.0
360,623 + MPMX20_00341 0.14 +0.1
360,658 + MPMX20_00341 0.22 +0.1
360,658 + MPMX20_00341 0.22 -1.9
360,675 + MPMX20_00341 0.25 +1.1
360,683 - MPMX20_00341 0.27 -1.3
360,704 - MPMX20_00341 0.31 +1.7
360,710 - MPMX20_00341 0.33 +0.3
360,750 + MPMX20_00341 0.41 +0.2
360,750 + MPMX20_00341 0.41 +1.9
360,758 - MPMX20_00341 0.42 -0.0
360,758 - MPMX20_00341 0.42 -0.2
360,769 + MPMX20_00341 0.45 +0.6
360,777 - MPMX20_00341 0.46 +1.0
360,777 - MPMX20_00341 0.46 -0.2
360,856 + MPMX20_00341 0.63 -1.2
360,906 + MPMX20_00341 0.73 -1.5
360,958 + MPMX20_00341 0.84 +1.1
360,958 + MPMX20_00341 0.84 -1.3
360,959 + MPMX20_00341 0.84 -0.7
360,959 + MPMX20_00341 0.84 +0.1
360,959 + MPMX20_00341 0.84 -0.2
360,967 - MPMX20_00341 0.86 -1.0
360,967 - MPMX20_00341 0.86 -1.6
361,013 + -1.4
361,035 + -1.4
361,036 + -1.9
361,044 - -1.7
361,072 + -1.2
361,072 + -0.0
361,112 - MPMX20_00342 0.14 +0.3
361,164 + MPMX20_00342 0.25 -2.6
361,203 + MPMX20_00342 0.33 +1.8
361,203 + MPMX20_00342 0.33 -1.5
361,204 - MPMX20_00342 0.33 +0.4
361,226 + MPMX20_00342 0.38 +0.3
361,226 + MPMX20_00342 0.38 -1.7
361,234 - MPMX20_00342 0.39 -2.2
361,234 - MPMX20_00342 0.39 -0.7
361,234 - MPMX20_00342 0.39 -0.8
361,234 - MPMX20_00342 0.39 -0.3
361,295 + MPMX20_00342 0.52 -1.5
361,295 + MPMX20_00342 0.52 -1.1
361,370 - MPMX20_00342 0.68 -1.2
361,396 + MPMX20_00342 0.73 -1.0
361,491 + -0.5
361,593 + -1.0
361,640 - -0.5
361,651 - -2.0
361,665 + +7.5
361,665 + +1.7
361,665 + +1.1
361,673 - -0.5
361,695 - -0.4
361,861 - +0.6
361,885 - -0.1
361,910 + -0.8
361,949 + MPMX20_00343 0.11 +1.0
361,959 + MPMX20_00343 0.12 -0.4
361,959 + MPMX20_00343 0.12 +0.1
361,959 + MPMX20_00343 0.12 +0.1
361,967 - MPMX20_00343 0.13 +0.1
361,967 - MPMX20_00343 0.13 -1.0
361,967 - MPMX20_00343 0.13 -0.3
362,025 + MPMX20_00343 0.20 -0.9
362,059 + MPMX20_00343 0.24 +0.0
362,127 + MPMX20_00343 0.32 -0.5
362,135 - MPMX20_00343 0.33 -0.2
362,184 + MPMX20_00343 0.39 -1.9
362,276 - MPMX20_00343 0.51 -0.4
362,278 + MPMX20_00343 0.51 +2.1
362,283 - MPMX20_00343 0.51 +0.6
362,358 - MPMX20_00343 0.61 +0.3
362,375 - MPMX20_00343 0.63 +0.3
362,405 + MPMX20_00343 0.66 -0.6
362,413 - MPMX20_00343 0.67 -1.0
362,413 - MPMX20_00343 0.67 +0.1
362,445 - MPMX20_00343 0.71 -0.9
362,451 + MPMX20_00343 0.72 +0.6
362,451 + MPMX20_00343 0.72 -0.4
362,451 + MPMX20_00343 0.72 -0.2

Or see this region's nucleotide sequence