Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04349 and MPMX20_04350 are separated by 191 nucleotides MPMX20_04350 and MPMX20_04351 are separated by 166 nucleotides MPMX20_04351 and MPMX20_04352 are separated by 72 nucleotides
MPMX20_04349: MPMX20_04349 - Solute-binding protein, at 4,543,699 to 4,544,670
_04349
MPMX20_04350: MPMX20_04350 - Sulfur carrier protein TusA, at 4,544,862 to 4,545,104
_04350
MPMX20_04351: MPMX20_04351 - Queuosine precursor transporter, at 4,545,271 to 4,545,936
_04351
MPMX20_04352: MPMX20_04352 - hypothetical protein, at 4,546,009 to 4,546,566
_04352
Position (kb)
4544
4545
4546 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4543.869 kb on - strand, within MPMX20_04349 at 4543.872 kb on + strand, within MPMX20_04349 at 4543.880 kb on - strand, within MPMX20_04349 at 4543.891 kb on + strand, within MPMX20_04349 at 4543.927 kb on + strand, within MPMX20_04349 at 4543.927 kb on + strand, within MPMX20_04349 at 4543.967 kb on - strand, within MPMX20_04349 at 4544.010 kb on + strand, within MPMX20_04349 at 4544.017 kb on + strand, within MPMX20_04349 at 4544.018 kb on - strand, within MPMX20_04349 at 4544.039 kb on + strand, within MPMX20_04349 at 4544.041 kb on + strand, within MPMX20_04349 at 4544.097 kb on + strand, within MPMX20_04349 at 4544.145 kb on + strand, within MPMX20_04349 at 4544.145 kb on + strand, within MPMX20_04349 at 4544.158 kb on - strand, within MPMX20_04349 at 4544.163 kb on - strand, within MPMX20_04349 at 4544.272 kb on - strand, within MPMX20_04349 at 4544.337 kb on - strand, within MPMX20_04349 at 4544.342 kb on - strand, within MPMX20_04349 at 4544.351 kb on + strand, within MPMX20_04349 at 4544.351 kb on + strand, within MPMX20_04349 at 4544.359 kb on - strand, within MPMX20_04349 at 4544.359 kb on - strand, within MPMX20_04349 at 4544.617 kb on + strand at 4544.631 kb on + strand at 4544.639 kb on - strand at 4544.639 kb on - strand at 4544.671 kb on - strand at 4544.673 kb on + strand at 4544.679 kb on + strand at 4544.679 kb on + strand at 4544.840 kb on + strand at 4544.842 kb on - strand at 4544.842 kb on - strand at 4544.867 kb on - strand at 4545.221 kb on - strand at 4545.277 kb on - strand at 4545.296 kb on + strand at 4545.353 kb on + strand, within MPMX20_04351 at 4545.356 kb on + strand, within MPMX20_04351 at 4545.366 kb on + strand, within MPMX20_04351 at 4545.398 kb on + strand, within MPMX20_04351 at 4545.442 kb on - strand, within MPMX20_04351 at 4545.474 kb on - strand, within MPMX20_04351 at 4545.560 kb on + strand, within MPMX20_04351 at 4545.560 kb on + strand, within MPMX20_04351 at 4545.568 kb on - strand, within MPMX20_04351 at 4545.586 kb on - strand, within MPMX20_04351 at 4545.586 kb on - strand, within MPMX20_04351 at 4545.614 kb on + strand, within MPMX20_04351 at 4545.622 kb on - strand, within MPMX20_04351 at 4545.784 kb on + strand, within MPMX20_04351 at 4545.821 kb on + strand, within MPMX20_04351 at 4545.821 kb on + strand, within MPMX20_04351 at 4545.821 kb on + strand, within MPMX20_04351 at 4545.821 kb on + strand, within MPMX20_04351 at 4545.829 kb on - strand, within MPMX20_04351 at 4545.829 kb on - strand, within MPMX20_04351 at 4545.829 kb on - strand, within MPMX20_04351 at 4545.829 kb on - strand, within MPMX20_04351 at 4545.837 kb on - strand, within MPMX20_04351 at 4545.844 kb on + strand, within MPMX20_04351 at 4545.893 kb on - strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.931 kb on + strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.939 kb on - strand at 4545.963 kb on - strand at 4546.034 kb on + strand at 4546.056 kb on - strand at 4546.056 kb on - strand at 4546.096 kb on - strand, within MPMX20_04352
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,543,869 - MPMX20_04349 0.17 +0.6 4,543,872 + MPMX20_04349 0.18 -0.2 4,543,880 - MPMX20_04349 0.19 -1.2 4,543,891 + MPMX20_04349 0.20 -0.8 4,543,927 + MPMX20_04349 0.23 -1.0 4,543,927 + MPMX20_04349 0.23 -0.7 4,543,967 - MPMX20_04349 0.28 -3.6 4,544,010 + MPMX20_04349 0.32 -0.2 4,544,017 + MPMX20_04349 0.33 -1.3 4,544,018 - MPMX20_04349 0.33 +0.9 4,544,039 + MPMX20_04349 0.35 -0.0 4,544,041 + MPMX20_04349 0.35 +0.1 4,544,097 + MPMX20_04349 0.41 -1.6 4,544,145 + MPMX20_04349 0.46 -0.8 4,544,145 + MPMX20_04349 0.46 +0.9 4,544,158 - MPMX20_04349 0.47 -0.6 4,544,163 - MPMX20_04349 0.48 +1.1 4,544,272 - MPMX20_04349 0.59 +0.2 4,544,337 - MPMX20_04349 0.66 +2.1 4,544,342 - MPMX20_04349 0.66 -0.3 4,544,351 + MPMX20_04349 0.67 -0.3 4,544,351 + MPMX20_04349 0.67 +1.1 4,544,359 - MPMX20_04349 0.68 +0.6 4,544,359 - MPMX20_04349 0.68 -0.5 4,544,617 + +0.3 4,544,631 + -0.4 4,544,639 - -1.2 4,544,639 - +0.4 4,544,671 - -1.4 4,544,673 + -0.4 4,544,679 + -1.7 4,544,679 + -0.2 4,544,840 + +1.5 4,544,842 - -0.0 4,544,842 - +1.1 4,544,867 - -0.6 4,545,221 - +1.2 4,545,277 - -0.2 4,545,296 + +0.3 4,545,353 + MPMX20_04351 0.12 +0.2 4,545,356 + MPMX20_04351 0.13 +0.5 4,545,366 + MPMX20_04351 0.14 -0.0 4,545,398 + MPMX20_04351 0.19 +1.5 4,545,442 - MPMX20_04351 0.26 +2.5 4,545,474 - MPMX20_04351 0.30 -0.4 4,545,560 + MPMX20_04351 0.43 +0.0 4,545,560 + MPMX20_04351 0.43 +0.4 4,545,568 - MPMX20_04351 0.45 +2.1 4,545,586 - MPMX20_04351 0.47 -1.3 4,545,586 - MPMX20_04351 0.47 +1.7 4,545,614 + MPMX20_04351 0.52 +0.5 4,545,622 - MPMX20_04351 0.53 -0.4 4,545,784 + MPMX20_04351 0.77 -1.7 4,545,821 + MPMX20_04351 0.83 -2.2 4,545,821 + MPMX20_04351 0.83 +0.5 4,545,821 + MPMX20_04351 0.83 -0.5 4,545,821 + MPMX20_04351 0.83 +0.1 4,545,829 - MPMX20_04351 0.84 -0.6 4,545,829 - MPMX20_04351 0.84 -0.3 4,545,829 - MPMX20_04351 0.84 +1.3 4,545,829 - MPMX20_04351 0.84 -1.2 4,545,837 - MPMX20_04351 0.85 -1.3 4,545,844 + MPMX20_04351 0.86 +0.5 4,545,893 - -0.4 4,545,931 + -1.0 4,545,931 + -0.6 4,545,931 + -0.6 4,545,931 + +0.3 4,545,931 + +1.3 4,545,931 + +0.7 4,545,931 + -0.5 4,545,931 + +1.1 4,545,931 + -1.5 4,545,931 + -0.1 4,545,931 + +0.2 4,545,939 - +0.3 4,545,939 - -0.9 4,545,939 - +1.7 4,545,939 - -2.2 4,545,939 - -0.6 4,545,939 - +0.8 4,545,939 - -1.2 4,545,939 - -3.3 4,545,939 - -0.7 4,545,939 - +0.8 4,545,939 - -2.8 4,545,939 - +0.2 4,545,939 - -0.2 4,545,939 - -0.2 4,545,963 - -1.0 4,546,034 + -1.4 4,546,056 - -2.2 4,546,056 - +1.2 4,546,096 - MPMX20_04352 0.16 -1.4
Or see this region's nucleotide sequence