Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02285 and MPMX20_02286 are separated by 86 nucleotides MPMX20_02286 and MPMX20_02287 are separated by 60 nucleotides MPMX20_02287 and MPMX20_02288 are separated by 474 nucleotides MPMX20_02288 and MPMX20_02289 are separated by 284 nucleotides
MPMX20_02285: MPMX20_02285 - GDP-mannose pyrophosphatase NudK, at 2,396,238 to 2,396,822
_02285
MPMX20_02286: MPMX20_02286 - Glycerol-3-phosphate regulon repressor, at 2,396,909 to 2,397,682
_02286
MPMX20_02287: MPMX20_02287 - hypothetical protein, at 2,397,743 to 2,398,105
_02287
MPMX20_02288: MPMX20_02288 - hypothetical protein, at 2,398,580 to 2,398,807
_02288
MPMX20_02289: MPMX20_02289 - hypothetical protein, at 2,399,092 to 2,400,483
_02289
Position (kb)
2397
2398
2399 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 2396.777 kb on + strand at 2396.777 kb on + strand at 2396.777 kb on + strand at 2396.785 kb on - strand at 2396.804 kb on - strand at 2396.911 kb on + strand at 2396.947 kb on + strand at 2396.955 kb on - strand at 2396.960 kb on + strand at 2396.960 kb on + strand at 2396.968 kb on - strand at 2396.973 kb on - strand at 2397.151 kb on + strand, within MPMX20_02286 at 2397.213 kb on + strand, within MPMX20_02286 at 2397.213 kb on + strand, within MPMX20_02286 at 2397.221 kb on - strand, within MPMX20_02286 at 2397.221 kb on - strand, within MPMX20_02286 at 2397.221 kb on - strand, within MPMX20_02286 at 2397.221 kb on - strand, within MPMX20_02286 at 2397.223 kb on + strand, within MPMX20_02286 at 2397.270 kb on + strand, within MPMX20_02286 at 2397.270 kb on + strand, within MPMX20_02286 at 2397.270 kb on + strand, within MPMX20_02286 at 2397.272 kb on - strand, within MPMX20_02286 at 2397.278 kb on - strand, within MPMX20_02286 at 2397.278 kb on - strand, within MPMX20_02286 at 2397.306 kb on + strand, within MPMX20_02286 at 2397.312 kb on + strand, within MPMX20_02286 at 2397.314 kb on - strand, within MPMX20_02286 at 2397.409 kb on - strand, within MPMX20_02286 at 2397.443 kb on + strand, within MPMX20_02286 at 2397.660 kb on + strand at 2397.668 kb on - strand at 2397.684 kb on - strand at 2397.703 kb on - strand at 2397.717 kb on - strand at 2397.721 kb on + strand at 2397.853 kb on - strand, within MPMX20_02287 at 2397.893 kb on - strand, within MPMX20_02287 at 2397.944 kb on - strand, within MPMX20_02287 at 2397.987 kb on + strand, within MPMX20_02287 at 2398.240 kb on + strand at 2398.240 kb on + strand at 2398.248 kb on - strand at 2398.248 kb on - strand at 2398.248 kb on - strand at 2398.276 kb on + strand at 2398.279 kb on - strand at 2398.323 kb on - strand at 2398.377 kb on - strand at 2398.450 kb on + strand at 2398.545 kb on + strand at 2398.545 kb on + strand at 2398.576 kb on - strand at 2398.593 kb on - strand at 2398.595 kb on - strand at 2398.821 kb on + strand at 2398.821 kb on + strand at 2398.821 kb on + strand at 2398.821 kb on + strand at 2398.821 kb on + strand at 2398.829 kb on - strand at 2398.829 kb on - strand at 2398.829 kb on - strand at 2398.829 kb on - strand at 2398.830 kb on - strand at 2398.839 kb on - strand at 2398.841 kb on + strand at 2398.841 kb on + strand at 2398.841 kb on + strand at 2398.841 kb on + strand at 2398.849 kb on - strand at 2398.886 kb on - strand at 2398.966 kb on + strand at 2398.966 kb on + strand at 2398.994 kb on + strand at 2398.994 kb on + strand at 2398.994 kb on + strand at 2398.994 kb on + strand at 2399.002 kb on - strand at 2399.017 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,396,777 + +0.2 2,396,777 + -0.5 2,396,777 + -0.9 2,396,785 - -0.3 2,396,804 - -2.1 2,396,911 + +0.2 2,396,947 + -2.6 2,396,955 - +0.2 2,396,960 + -1.0 2,396,960 + -0.5 2,396,968 - -0.5 2,396,973 - +0.5 2,397,151 + MPMX20_02286 0.31 -0.2 2,397,213 + MPMX20_02286 0.39 -1.1 2,397,213 + MPMX20_02286 0.39 +1.1 2,397,221 - MPMX20_02286 0.40 -0.6 2,397,221 - MPMX20_02286 0.40 +0.6 2,397,221 - MPMX20_02286 0.40 -0.9 2,397,221 - MPMX20_02286 0.40 -0.9 2,397,223 + MPMX20_02286 0.41 -1.2 2,397,270 + MPMX20_02286 0.47 +0.7 2,397,270 + MPMX20_02286 0.47 -0.1 2,397,270 + MPMX20_02286 0.47 -0.5 2,397,272 - MPMX20_02286 0.47 +1.8 2,397,278 - MPMX20_02286 0.48 +1.1 2,397,278 - MPMX20_02286 0.48 -0.3 2,397,306 + MPMX20_02286 0.51 -1.5 2,397,312 + MPMX20_02286 0.52 -0.9 2,397,314 - MPMX20_02286 0.52 +3.6 2,397,409 - MPMX20_02286 0.65 +0.9 2,397,443 + MPMX20_02286 0.69 -2.0 2,397,660 + -0.9 2,397,668 - -1.3 2,397,684 - +1.3 2,397,703 - +1.1 2,397,717 - -1.3 2,397,721 + -0.1 2,397,853 - MPMX20_02287 0.30 +1.5 2,397,893 - MPMX20_02287 0.41 -1.0 2,397,944 - MPMX20_02287 0.55 +0.1 2,397,987 + MPMX20_02287 0.67 -1.5 2,398,240 + +6.5 2,398,240 + +1.8 2,398,248 - -0.7 2,398,248 - +1.3 2,398,248 - +0.1 2,398,276 + -0.9 2,398,279 - -0.2 2,398,323 - -0.1 2,398,377 - -1.3 2,398,450 + -1.1 2,398,545 + -0.9 2,398,545 + -0.4 2,398,576 - -1.7 2,398,593 - -2.7 2,398,595 - -0.8 2,398,821 + -1.3 2,398,821 + -0.9 2,398,821 + -0.1 2,398,821 + -0.3 2,398,821 + +1.5 2,398,829 - +1.1 2,398,829 - +0.4 2,398,829 - -0.7 2,398,829 - +1.5 2,398,830 - +0.1 2,398,839 - +1.4 2,398,841 + -1.3 2,398,841 + -0.2 2,398,841 + +0.1 2,398,841 + +0.0 2,398,849 - +1.4 2,398,886 - +1.5 2,398,966 + -1.3 2,398,966 + +1.4 2,398,994 + -0.1 2,398,994 + +0.5 2,398,994 + -0.1 2,398,994 + +0.5 2,399,002 - +0.6 2,399,017 + -0.5
Or see this region's nucleotide sequence