Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00659 and MPMX20_00660 are separated by 38 nucleotides MPMX20_00660 and MPMX20_00661 are separated by 207 nucleotides MPMX20_00661 and MPMX20_00662 are separated by 13 nucleotides MPMX20_00662 and MPMX20_00663 are separated by 47 nucleotides MPMX20_00663 and MPMX20_00664 are separated by 94 nucleotides
MPMX20_00659: MPMX20_00659 - Transcriptional activator protein BglJ, at 682,639 to 683,325
_00659
MPMX20_00660: MPMX20_00660 - hypothetical protein, at 683,364 to 683,822
_00660
MPMX20_00661: MPMX20_00661 - hypothetical protein, at 684,030 to 684,137
_00661
MPMX20_00662: MPMX20_00662 - Lichenan permease IIC component, at 684,151 to 685,497
_00662
MPMX20_00663: MPMX20_00663 - Ferric iron reductase protein FhuF, at 685,545 to 686,333
_00663
MPMX20_00664: MPMX20_00664 - hypothetical protein, at 686,428 to 687,492
_00664
Position (kb) 684
685
686 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 683.176 kb on + strand, within MPMX20_00659 at 683.191 kb on + strand, within MPMX20_00659 at 683.198 kb on + strand, within MPMX20_00659 at 683.206 kb on - strand, within MPMX20_00659 at 683.206 kb on - strand, within MPMX20_00659 at 683.207 kb on - strand, within MPMX20_00659 at 683.211 kb on + strand, within MPMX20_00659 at 683.211 kb on + strand, within MPMX20_00659 at 683.211 kb on + strand, within MPMX20_00659 at 683.216 kb on + strand, within MPMX20_00659 at 683.219 kb on - strand, within MPMX20_00659 at 683.219 kb on - strand, within MPMX20_00659 at 683.219 kb on - strand, within MPMX20_00659 at 683.220 kb on - strand, within MPMX20_00659 at 683.228 kb on + strand, within MPMX20_00659 at 683.228 kb on + strand, within MPMX20_00659 at 683.228 kb on + strand, within MPMX20_00659 at 683.236 kb on - strand, within MPMX20_00659 at 683.236 kb on - strand, within MPMX20_00659 at 683.260 kb on + strand at 683.267 kb on + strand at 683.279 kb on - strand at 683.294 kb on + strand at 683.294 kb on + strand at 683.294 kb on + strand at 683.294 kb on + strand at 683.294 kb on + strand at 683.294 kb on + strand at 683.294 kb on + strand at 683.294 kb on + strand at 683.299 kb on + strand at 683.299 kb on + strand at 683.299 kb on + strand at 683.299 kb on + strand at 683.299 kb on + strand at 683.299 kb on + strand at 683.302 kb on - strand at 683.302 kb on - strand at 683.302 kb on - strand at 683.302 kb on - strand at 683.302 kb on - strand at 683.302 kb on - strand at 683.302 kb on - strand at 683.302 kb on - strand at 683.302 kb on - strand at 683.302 kb on - strand at 683.307 kb on - strand at 683.307 kb on - strand at 683.307 kb on - strand at 683.334 kb on - strand at 683.334 kb on - strand at 683.338 kb on + strand at 683.338 kb on + strand at 683.348 kb on + strand at 683.349 kb on + strand at 683.356 kb on - strand at 683.375 kb on - strand at 683.394 kb on + strand at 683.394 kb on + strand at 683.402 kb on - strand at 683.402 kb on - strand at 683.407 kb on + strand at 683.460 kb on - strand, within MPMX20_00660 at 683.462 kb on + strand, within MPMX20_00660 at 683.467 kb on - strand, within MPMX20_00660 at 683.470 kb on - strand, within MPMX20_00660 at 683.525 kb on + strand, within MPMX20_00660 at 683.554 kb on - strand, within MPMX20_00660 at 683.557 kb on - strand, within MPMX20_00660 at 683.564 kb on + strand, within MPMX20_00660 at 683.572 kb on + strand, within MPMX20_00660 at 683.580 kb on - strand, within MPMX20_00660 at 683.599 kb on + strand, within MPMX20_00660 at 683.630 kb on - strand, within MPMX20_00660 at 683.713 kb on - strand, within MPMX20_00660 at 683.722 kb on + strand, within MPMX20_00660 at 683.722 kb on + strand, within MPMX20_00660 at 683.730 kb on - strand, within MPMX20_00660 at 683.740 kb on - strand, within MPMX20_00660 at 683.743 kb on + strand, within MPMX20_00660 at 683.768 kb on + strand, within MPMX20_00660 at 683.768 kb on + strand, within MPMX20_00660 at 683.768 kb on + strand, within MPMX20_00660 at 683.768 kb on + strand, within MPMX20_00660 at 683.768 kb on + strand, within MPMX20_00660 at 683.776 kb on - strand, within MPMX20_00660 at 683.799 kb on + strand at 683.811 kb on + strand at 683.818 kb on + strand at 683.819 kb on - strand at 683.836 kb on + strand at 683.871 kb on - strand at 683.873 kb on + strand at 683.873 kb on - strand at 683.883 kb on - strand at 683.883 kb on - strand at 683.883 kb on - strand at 683.979 kb on + strand at 683.984 kb on + strand at 683.991 kb on + strand at 683.993 kb on + strand at 684.036 kb on - strand at 684.042 kb on + strand, within MPMX20_00661 at 684.042 kb on + strand, within MPMX20_00661 at 684.042 kb on + strand, within MPMX20_00661 at 684.047 kb on + strand, within MPMX20_00661 at 684.047 kb on + strand, within MPMX20_00661 at 684.050 kb on - strand, within MPMX20_00661 at 684.050 kb on - strand, within MPMX20_00661 at 684.050 kb on - strand, within MPMX20_00661 at 684.092 kb on + strand, within MPMX20_00661 at 684.094 kb on - strand, within MPMX20_00661 at 684.100 kb on - strand, within MPMX20_00661 at 684.111 kb on - strand, within MPMX20_00661 at 684.124 kb on + strand, within MPMX20_00661 at 684.132 kb on - strand at 684.133 kb on + strand at 684.141 kb on - strand at 684.146 kb on - strand at 684.149 kb on - strand at 684.153 kb on - strand at 684.155 kb on + strand at 684.155 kb on + strand at 684.169 kb on - strand at 684.235 kb on - strand at 684.238 kb on - strand at 684.242 kb on + strand at 684.245 kb on - strand at 684.245 kb on - strand at 684.262 kb on + strand at 684.262 kb on + strand at 684.270 kb on - strand at 684.335 kb on - strand, within MPMX20_00662 at 684.342 kb on + strand, within MPMX20_00662 at 684.350 kb on - strand, within MPMX20_00662 at 684.368 kb on - strand, within MPMX20_00662 at 684.372 kb on - strand, within MPMX20_00662 at 684.412 kb on + strand, within MPMX20_00662 at 684.427 kb on - strand, within MPMX20_00662 at 684.436 kb on + strand, within MPMX20_00662 at 684.444 kb on - strand, within MPMX20_00662 at 684.444 kb on - strand, within MPMX20_00662 at 684.457 kb on + strand, within MPMX20_00662 at 684.457 kb on + strand, within MPMX20_00662 at 684.458 kb on + strand, within MPMX20_00662 at 684.458 kb on + strand, within MPMX20_00662 at 684.466 kb on - strand, within MPMX20_00662 at 684.466 kb on - strand, within MPMX20_00662 at 684.494 kb on + strand, within MPMX20_00662 at 684.494 kb on + strand, within MPMX20_00662 at 684.494 kb on + strand, within MPMX20_00662 at 684.494 kb on + strand, within MPMX20_00662 at 684.494 kb on + strand, within MPMX20_00662 at 684.494 kb on + strand, within MPMX20_00662 at 684.494 kb on + strand, within MPMX20_00662 at 684.502 kb on - strand, within MPMX20_00662 at 684.502 kb on - strand, within MPMX20_00662 at 684.585 kb on + strand, within MPMX20_00662 at 684.622 kb on + strand, within MPMX20_00662 at 684.622 kb on + strand, within MPMX20_00662 at 684.632 kb on + strand, within MPMX20_00662 at 684.632 kb on + strand, within MPMX20_00662 at 684.640 kb on - strand, within MPMX20_00662 at 684.666 kb on - strand, within MPMX20_00662 at 684.681 kb on + strand, within MPMX20_00662 at 684.713 kb on + strand, within MPMX20_00662 at 684.721 kb on - strand, within MPMX20_00662 at 684.728 kb on + strand, within MPMX20_00662 at 684.737 kb on + strand, within MPMX20_00662 at 684.792 kb on - strand, within MPMX20_00662 at 684.834 kb on + strand, within MPMX20_00662 at 684.965 kb on + strand, within MPMX20_00662 at 684.973 kb on - strand, within MPMX20_00662 at 684.997 kb on - strand, within MPMX20_00662 at 685.071 kb on - strand, within MPMX20_00662 at 685.079 kb on + strand, within MPMX20_00662 at 685.102 kb on + strand, within MPMX20_00662 at 685.135 kb on + strand, within MPMX20_00662 at 685.136 kb on + strand, within MPMX20_00662 at 685.146 kb on + strand, within MPMX20_00662 at 685.210 kb on - strand, within MPMX20_00662 at 685.230 kb on + strand, within MPMX20_00662 at 685.230 kb on + strand, within MPMX20_00662 at 685.233 kb on - strand, within MPMX20_00662 at 685.253 kb on - strand, within MPMX20_00662 at 685.253 kb on - strand, within MPMX20_00662 at 685.372 kb on + strand at 685.380 kb on - strand at 685.506 kb on + strand at 685.524 kb on - strand at 685.531 kb on + strand at 685.544 kb on - strand at 685.544 kb on - strand at 685.571 kb on + strand at 685.634 kb on + strand, within MPMX20_00663 at 685.642 kb on - strand, within MPMX20_00663 at 685.654 kb on + strand, within MPMX20_00663 at 685.700 kb on + strand, within MPMX20_00663 at 685.701 kb on + strand, within MPMX20_00663 at 685.706 kb on + strand, within MPMX20_00663 at 685.708 kb on + strand, within MPMX20_00663 at 685.709 kb on - strand, within MPMX20_00663 at 685.715 kb on - strand, within MPMX20_00663 at 685.716 kb on - strand, within MPMX20_00663 at 685.716 kb on - strand, within MPMX20_00663 at 685.718 kb on + strand, within MPMX20_00663 at 685.723 kb on + strand, within MPMX20_00663 at 685.831 kb on + strand, within MPMX20_00663 at 685.849 kb on + strand, within MPMX20_00663 at 685.849 kb on + strand, within MPMX20_00663 at 685.849 kb on + strand, within MPMX20_00663 at 685.869 kb on + strand, within MPMX20_00663 at 685.869 kb on + strand, within MPMX20_00663 at 685.869 kb on + strand, within MPMX20_00663 at 685.876 kb on + strand, within MPMX20_00663 at 685.879 kb on + strand, within MPMX20_00663 at 685.881 kb on + strand, within MPMX20_00663 at 685.884 kb on - strand, within MPMX20_00663 at 685.887 kb on - strand, within MPMX20_00663 at 685.920 kb on + strand, within MPMX20_00663 at 685.947 kb on - strand, within MPMX20_00663 at 685.996 kb on - strand, within MPMX20_00663 at 686.014 kb on + strand, within MPMX20_00663 at 686.035 kb on + strand, within MPMX20_00663 at 686.043 kb on - strand, within MPMX20_00663 at 686.050 kb on - strand, within MPMX20_00663 at 686.078 kb on + strand, within MPMX20_00663 at 686.108 kb on + strand, within MPMX20_00663 at 686.108 kb on + strand, within MPMX20_00663 at 686.130 kb on + strand, within MPMX20_00663 at 686.167 kb on - strand, within MPMX20_00663 at 686.234 kb on - strand, within MPMX20_00663 at 686.275 kb on + strand at 686.290 kb on + strand at 686.414 kb on + strand at 686.425 kb on + strand at 686.435 kb on + strand at 686.435 kb on + strand at 686.435 kb on + strand at 686.435 kb on + strand at 686.435 kb on + strand at 686.435 kb on + strand at 686.443 kb on - strand at 686.443 kb on - strand at 686.443 kb on - strand at 686.443 kb on - strand at 686.443 kb on - strand at 686.443 kb on - strand at 686.454 kb on + strand at 686.455 kb on - strand at 686.455 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct remove 683,176 + MPMX20_00659 0.78 +3.6 683,191 + MPMX20_00659 0.80 +0.3 683,198 + MPMX20_00659 0.81 -2.7 683,206 - MPMX20_00659 0.83 +0.4 683,206 - MPMX20_00659 0.83 -0.6 683,207 - MPMX20_00659 0.83 +0.2 683,211 + MPMX20_00659 0.83 -0.5 683,211 + MPMX20_00659 0.83 -2.2 683,211 + MPMX20_00659 0.83 +0.2 683,216 + MPMX20_00659 0.84 -0.9 683,219 - MPMX20_00659 0.84 -0.0 683,219 - MPMX20_00659 0.84 -0.8 683,219 - MPMX20_00659 0.84 -0.6 683,220 - MPMX20_00659 0.85 -0.3 683,228 + MPMX20_00659 0.86 +2.0 683,228 + MPMX20_00659 0.86 -0.0 683,228 + MPMX20_00659 0.86 +1.0 683,236 - MPMX20_00659 0.87 -0.4 683,236 - MPMX20_00659 0.87 -0.0 683,260 + +0.2 683,267 + -1.3 683,279 - -1.3 683,294 + +0.2 683,294 + -0.0 683,294 + -0.8 683,294 + -1.0 683,294 + +1.1 683,294 + -1.6 683,294 + +1.9 683,294 + +2.0 683,299 + -0.6 683,299 + -0.0 683,299 + +0.0 683,299 + -0.2 683,299 + -1.0 683,299 + +2.0 683,302 - +0.2 683,302 - -0.4 683,302 - -0.3 683,302 - -1.0 683,302 - -1.2 683,302 - -0.6 683,302 - -0.2 683,302 - +0.4 683,302 - +0.3 683,302 - -0.0 683,307 - +0.2 683,307 - -0.0 683,307 - -1.5 683,334 - -0.3 683,334 - -1.4 683,338 + +1.7 683,338 + +0.6 683,348 + +1.4 683,349 + +1.0 683,356 - -0.7 683,375 - -1.0 683,394 + -1.9 683,394 + +5.9 683,402 - +0.5 683,402 - -0.6 683,407 + +0.2 683,460 - MPMX20_00660 0.21 -0.6 683,462 + MPMX20_00660 0.21 -0.2 683,467 - MPMX20_00660 0.22 +0.1 683,470 - MPMX20_00660 0.23 +1.0 683,525 + MPMX20_00660 0.35 -0.9 683,554 - MPMX20_00660 0.41 -0.1 683,557 - MPMX20_00660 0.42 -0.7 683,564 + MPMX20_00660 0.44 +2.0 683,572 + MPMX20_00660 0.45 -0.9 683,580 - MPMX20_00660 0.47 +2.7 683,599 + MPMX20_00660 0.51 -0.0 683,630 - MPMX20_00660 0.58 -0.6 683,713 - MPMX20_00660 0.76 +1.0 683,722 + MPMX20_00660 0.78 -0.9 683,722 + MPMX20_00660 0.78 -0.3 683,730 - MPMX20_00660 0.80 -0.8 683,740 - MPMX20_00660 0.82 -1.3 683,743 + MPMX20_00660 0.83 -0.3 683,768 + MPMX20_00660 0.88 +1.4 683,768 + MPMX20_00660 0.88 -0.7 683,768 + MPMX20_00660 0.88 -0.3 683,768 + MPMX20_00660 0.88 -0.6 683,768 + MPMX20_00660 0.88 +1.7 683,776 - MPMX20_00660 0.90 -1.3 683,799 + +2.0 683,811 + -1.0 683,818 + +2.0 683,819 - -0.0 683,836 + -1.1 683,871 - -1.0 683,873 + +1.6 683,873 - -0.9 683,883 - -1.0 683,883 - -0.0 683,883 - -0.8 683,979 + -1.7 683,984 + +1.4 683,991 + +0.4 683,993 + +1.2 684,036 - +1.0 684,042 + MPMX20_00661 0.11 -0.3 684,042 + MPMX20_00661 0.11 -1.8 684,042 + MPMX20_00661 0.11 -0.5 684,047 + MPMX20_00661 0.16 -2.3 684,047 + MPMX20_00661 0.16 +1.4 684,050 - MPMX20_00661 0.19 +2.0 684,050 - MPMX20_00661 0.19 -1.7 684,050 - MPMX20_00661 0.19 -0.6 684,092 + MPMX20_00661 0.57 -0.8 684,094 - MPMX20_00661 0.59 +0.4 684,100 - MPMX20_00661 0.65 -1.3 684,111 - MPMX20_00661 0.75 -0.1 684,124 + MPMX20_00661 0.87 +0.2 684,132 - +0.1 684,133 + -0.6 684,141 - -3.2 684,146 - -0.6 684,149 - -0.6 684,153 - +0.6 684,155 + +0.2 684,155 + -0.0 684,169 - -0.6 684,235 - -0.7 684,238 - +0.8 684,242 + -1.7 684,245 - -2.3 684,245 - +1.3 684,262 + -1.3 684,262 + +0.7 684,270 - +0.2 684,335 - MPMX20_00662 0.14 -0.6 684,342 + MPMX20_00662 0.14 +0.1 684,350 - MPMX20_00662 0.15 +2.0 684,368 - MPMX20_00662 0.16 +0.3 684,372 - MPMX20_00662 0.16 +1.0 684,412 + MPMX20_00662 0.19 +3.0 684,427 - MPMX20_00662 0.20 +0.3 684,436 + MPMX20_00662 0.21 -0.8 684,444 - MPMX20_00662 0.22 +0.4 684,444 - MPMX20_00662 0.22 +0.2 684,457 + MPMX20_00662 0.23 -0.8 684,457 + MPMX20_00662 0.23 -0.7 684,458 + MPMX20_00662 0.23 -0.8 684,458 + MPMX20_00662 0.23 -1.9 684,466 - MPMX20_00662 0.23 -0.3 684,466 - MPMX20_00662 0.23 -0.6 684,494 + MPMX20_00662 0.25 +1.0 684,494 + MPMX20_00662 0.25 -0.3 684,494 + MPMX20_00662 0.25 +0.2 684,494 + MPMX20_00662 0.25 +0.7 684,494 + MPMX20_00662 0.25 -1.0 684,494 + MPMX20_00662 0.25 -0.6 684,494 + MPMX20_00662 0.25 -0.3 684,502 - MPMX20_00662 0.26 -0.2 684,502 - MPMX20_00662 0.26 +2.0 684,585 + MPMX20_00662 0.32 -1.2 684,622 + MPMX20_00662 0.35 +0.4 684,622 + MPMX20_00662 0.35 +0.6 684,632 + MPMX20_00662 0.36 -0.3 684,632 + MPMX20_00662 0.36 -2.2 684,640 - MPMX20_00662 0.36 -1.9 684,666 - MPMX20_00662 0.38 -0.0 684,681 + MPMX20_00662 0.39 -0.3 684,713 + MPMX20_00662 0.42 -0.6 684,721 - MPMX20_00662 0.42 +0.2 684,728 + MPMX20_00662 0.43 -0.8 684,737 + MPMX20_00662 0.44 -2.0 684,792 - MPMX20_00662 0.48 -1.0 684,834 + MPMX20_00662 0.51 +1.0 684,965 + MPMX20_00662 0.60 +2.0 684,973 - MPMX20_00662 0.61 +1.0 684,997 - MPMX20_00662 0.63 -1.0 685,071 - MPMX20_00662 0.68 -0.8 685,079 + MPMX20_00662 0.69 -1.3 685,102 + MPMX20_00662 0.71 +0.1 685,135 + MPMX20_00662 0.73 +2.4 685,136 + MPMX20_00662 0.73 -1.0 685,146 + MPMX20_00662 0.74 -0.2 685,210 - MPMX20_00662 0.79 -2.9 685,230 + MPMX20_00662 0.80 -0.8 685,230 + MPMX20_00662 0.80 +0.4 685,233 - MPMX20_00662 0.80 -1.0 685,253 - MPMX20_00662 0.82 -1.1 685,253 - MPMX20_00662 0.82 +1.7 685,372 + -0.8 685,380 - +2.7 685,506 + -0.8 685,524 - -0.9 685,531 + +0.0 685,544 - -0.3 685,544 - -0.9 685,571 + +1.6 685,634 + MPMX20_00663 0.11 -0.7 685,642 - MPMX20_00663 0.12 +2.0 685,654 + MPMX20_00663 0.14 -1.5 685,700 + MPMX20_00663 0.20 -0.1 685,701 + MPMX20_00663 0.20 -0.7 685,706 + MPMX20_00663 0.20 -0.9 685,708 + MPMX20_00663 0.21 -2.3 685,709 - MPMX20_00663 0.21 -2.0 685,715 - MPMX20_00663 0.22 -0.8 685,716 - MPMX20_00663 0.22 -0.6 685,716 - MPMX20_00663 0.22 -0.6 685,718 + MPMX20_00663 0.22 -1.4 685,723 + MPMX20_00663 0.23 +1.0 685,831 + MPMX20_00663 0.36 +1.6 685,849 + MPMX20_00663 0.39 +2.0 685,849 + MPMX20_00663 0.39 -0.1 685,849 + MPMX20_00663 0.39 -0.3 685,869 + MPMX20_00663 0.41 -0.5 685,869 + MPMX20_00663 0.41 +1.0 685,869 + MPMX20_00663 0.41 +0.4 685,876 + MPMX20_00663 0.42 -3.0 685,879 + MPMX20_00663 0.42 -0.1 685,881 + MPMX20_00663 0.43 -2.9 685,884 - MPMX20_00663 0.43 -0.7 685,887 - MPMX20_00663 0.43 -1.1 685,920 + MPMX20_00663 0.48 -0.3 685,947 - MPMX20_00663 0.51 -1.2 685,996 - MPMX20_00663 0.57 -0.0 686,014 + MPMX20_00663 0.59 -1.2 686,035 + MPMX20_00663 0.62 -0.8 686,043 - MPMX20_00663 0.63 -1.6 686,050 - MPMX20_00663 0.64 +2.0 686,078 + MPMX20_00663 0.68 +0.4 686,108 + MPMX20_00663 0.71 -2.4 686,108 + MPMX20_00663 0.71 +0.8 686,130 + MPMX20_00663 0.74 -2.3 686,167 - MPMX20_00663 0.79 -0.3 686,234 - MPMX20_00663 0.87 -1.0 686,275 + +1.0 686,290 + +1.0 686,414 + -1.5 686,425 + -0.7 686,435 + -0.3 686,435 + -0.9 686,435 + -1.1 686,435 + -0.0 686,435 + +2.0 686,435 + -0.2 686,443 - +1.4 686,443 - +0.8 686,443 - +0.7 686,443 - -1.6 686,443 - +0.2 686,443 - -1.0 686,454 + -0.0 686,455 - -2.1 686,455 - +0.4
Or see this region's nucleotide sequence