Experiment: phage 93.2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_930 and Ac3H11_931 are separated by 321 nucleotides Ac3H11_931 and Ac3H11_932 are separated by 133 nucleotides
Ac3H11_930 - hypothetical protein, at 44,593 to 45,345
_930
Ac3H11_931 - Phytoene synthase (EC 2.5.1.32), at 45,667 to 46,611
_931
Ac3H11_932 - Probable Co/Zn/Cd efflux system membrane fusion protein, at 46,745 to 47,980
_932
Position (kb) 45
46
47 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 44.675 kb on + strand, within Ac3H11_930 at 44.675 kb on + strand, within Ac3H11_930 at 44.675 kb on + strand, within Ac3H11_930 at 44.675 kb on + strand, within Ac3H11_930 at 44.675 kb on + strand, within Ac3H11_930 at 44.675 kb on + strand, within Ac3H11_930 at 44.675 kb on + strand, within Ac3H11_930 at 44.675 kb on + strand, within Ac3H11_930 at 44.676 kb on - strand, within Ac3H11_930 at 44.676 kb on - strand, within Ac3H11_930 at 44.676 kb on - strand, within Ac3H11_930 at 44.676 kb on - strand, within Ac3H11_930 at 44.774 kb on + strand, within Ac3H11_930 at 44.774 kb on + strand, within Ac3H11_930 at 44.774 kb on + strand, within Ac3H11_930 at 44.775 kb on - strand, within Ac3H11_930 at 44.775 kb on - strand, within Ac3H11_930 at 44.977 kb on + strand, within Ac3H11_930 at 45.071 kb on + strand, within Ac3H11_930 at 45.071 kb on + strand, within Ac3H11_930 at 45.132 kb on - strand, within Ac3H11_930 at 45.373 kb on + strand at 45.374 kb on - strand at 45.421 kb on + strand at 45.421 kb on + strand at 45.422 kb on - strand at 45.457 kb on + strand at 45.458 kb on - strand at 45.458 kb on - strand at 45.467 kb on + strand at 45.489 kb on - strand at 45.668 kb on + strand at 45.668 kb on + strand at 45.668 kb on + strand at 45.668 kb on + strand at 45.669 kb on - strand at 45.669 kb on - strand at 45.669 kb on - strand at 45.669 kb on - strand at 45.669 kb on - strand at 46.674 kb on + strand at 46.976 kb on + strand, within Ac3H11_932 at 47.111 kb on + strand, within Ac3H11_932 at 47.111 kb on + strand, within Ac3H11_932 at 47.111 kb on + strand, within Ac3H11_932 at 47.111 kb on + strand, within Ac3H11_932 at 47.112 kb on - strand, within Ac3H11_932 at 47.112 kb on - strand, within Ac3H11_932 at 47.327 kb on + strand, within Ac3H11_932 at 47.327 kb on + strand, within Ac3H11_932 at 47.328 kb on - strand, within Ac3H11_932 at 47.328 kb on - strand, within Ac3H11_932 at 47.328 kb on - strand, within Ac3H11_932 at 47.328 kb on - strand, within Ac3H11_932
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.2 remove 44,675 + Ac3H11_930 0.11 +1.1 44,675 + Ac3H11_930 0.11 +0.4 44,675 + Ac3H11_930 0.11 -0.5 44,675 + Ac3H11_930 0.11 +0.8 44,675 + Ac3H11_930 0.11 +0.2 44,675 + Ac3H11_930 0.11 -0.8 44,675 + Ac3H11_930 0.11 -0.1 44,675 + Ac3H11_930 0.11 +0.6 44,676 - Ac3H11_930 0.11 +0.7 44,676 - Ac3H11_930 0.11 +0.2 44,676 - Ac3H11_930 0.11 -0.5 44,676 - Ac3H11_930 0.11 +0.1 44,774 + Ac3H11_930 0.24 -1.0 44,774 + Ac3H11_930 0.24 -1.6 44,774 + Ac3H11_930 0.24 -1.4 44,775 - Ac3H11_930 0.24 +0.8 44,775 - Ac3H11_930 0.24 -1.6 44,977 + Ac3H11_930 0.51 -0.6 45,071 + Ac3H11_930 0.63 +1.4 45,071 + Ac3H11_930 0.63 +0.5 45,132 - Ac3H11_930 0.72 +2.6 45,373 + +0.4 45,374 - +1.2 45,421 + +0.0 45,421 + +0.6 45,422 - -1.0 45,457 + +0.8 45,458 - -1.4 45,458 - -2.8 45,467 + +0.1 45,489 - -1.4 45,668 + -1.4 45,668 + -0.4 45,668 + -0.0 45,668 + -1.0 45,669 - -0.3 45,669 - -1.9 45,669 - -1.4 45,669 - -0.4 45,669 - -2.4 46,674 + -0.7 46,976 + Ac3H11_932 0.19 -1.4 47,111 + Ac3H11_932 0.30 -1.2 47,111 + Ac3H11_932 0.30 +0.6 47,111 + Ac3H11_932 0.30 -0.1 47,111 + Ac3H11_932 0.30 +0.1 47,112 - Ac3H11_932 0.30 -0.2 47,112 - Ac3H11_932 0.30 +0.8 47,327 + Ac3H11_932 0.47 -0.3 47,327 + Ac3H11_932 0.47 -0.1 47,328 - Ac3H11_932 0.47 -1.2 47,328 - Ac3H11_932 0.47 +0.7 47,328 - Ac3H11_932 0.47 +0.4 47,328 - Ac3H11_932 0.47 -0.5
Or see this region's nucleotide sequence