Experiment: phage 93.2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4819 and Ac3H11_4820 are separated by 23 nucleotides Ac3H11_4820 and Ac3H11_4821 are separated by 153 nucleotides
Ac3H11_4819 - FOG: TPR repeat, at 122,250 to 123,596
_4819
Ac3H11_4820 - FIG00349859: hypothetical protein, at 123,620 to 124,228
_4820
Ac3H11_4821 - putative amidase, at 124,382 to 125,785
_4821
Position (kb)
122
123
124 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 121.285 kb on + strand at 121.290 kb on - strand at 121.298 kb on - strand at 121.337 kb on + strand at 121.338 kb on - strand at 121.338 kb on - strand at 121.338 kb on - strand at 121.435 kb on - strand at 121.455 kb on - strand at 121.496 kb on + strand at 121.497 kb on - strand at 121.528 kb on + strand at 121.602 kb on + strand at 121.602 kb on + strand at 121.603 kb on - strand at 121.603 kb on - strand at 121.603 kb on - strand at 121.603 kb on - strand at 121.608 kb on + strand at 121.608 kb on + strand at 121.608 kb on + strand at 121.608 kb on + strand at 121.609 kb on - strand at 121.609 kb on - strand at 121.609 kb on - strand at 121.610 kb on + strand at 121.610 kb on + strand at 121.610 kb on + strand at 121.611 kb on - strand at 121.611 kb on - strand at 121.611 kb on - strand at 121.611 kb on - strand at 121.615 kb on + strand at 121.615 kb on + strand at 121.615 kb on + strand at 121.616 kb on - strand at 121.616 kb on - strand at 121.635 kb on + strand at 121.635 kb on + strand at 121.635 kb on + strand at 121.635 kb on + strand at 121.635 kb on + strand at 121.636 kb on - strand at 121.636 kb on - strand at 121.636 kb on - strand at 121.636 kb on - strand at 121.636 kb on - strand at 121.636 kb on - strand at 121.651 kb on + strand at 121.651 kb on + strand at 121.651 kb on + strand at 121.652 kb on - strand at 121.652 kb on - strand at 121.652 kb on - strand at 121.664 kb on + strand at 121.664 kb on + strand at 121.665 kb on - strand at 121.700 kb on + strand at 121.700 kb on + strand at 121.700 kb on + strand at 121.700 kb on + strand at 121.700 kb on + strand at 121.700 kb on + strand at 121.700 kb on + strand at 121.700 kb on + strand at 121.700 kb on + strand at 121.700 kb on + strand at 121.701 kb on - strand at 121.701 kb on - strand at 121.701 kb on - strand at 121.701 kb on - strand at 121.701 kb on - strand at 121.701 kb on - strand at 121.701 kb on - strand at 121.701 kb on - strand at 121.701 kb on - strand at 121.701 kb on - strand at 121.734 kb on + strand at 121.734 kb on + strand at 121.734 kb on + strand at 121.734 kb on + strand at 121.734 kb on + strand at 121.734 kb on + strand at 121.734 kb on + strand at 121.735 kb on - strand at 121.735 kb on - strand at 121.735 kb on - strand at 121.735 kb on - strand at 121.735 kb on - strand at 121.735 kb on - strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.753 kb on + strand at 121.754 kb on - strand at 121.754 kb on - strand at 121.754 kb on - strand at 121.754 kb on - strand at 121.754 kb on - strand at 121.754 kb on - strand at 121.754 kb on - strand at 121.754 kb on - strand at 121.754 kb on - strand at 121.754 kb on - strand at 121.775 kb on + strand at 121.781 kb on + strand at 121.784 kb on + strand at 121.784 kb on + strand at 121.784 kb on + strand at 121.784 kb on + strand at 121.784 kb on + strand at 121.785 kb on - strand at 121.785 kb on - strand at 121.785 kb on - strand at 121.785 kb on - strand at 121.807 kb on - strand at 121.811 kb on - strand at 121.824 kb on + strand at 121.825 kb on - strand at 121.890 kb on + strand at 121.890 kb on + strand at 121.890 kb on + strand at 121.891 kb on - strand at 121.913 kb on + strand at 121.920 kb on + strand at 121.920 kb on + strand at 121.920 kb on + strand at 121.920 kb on + strand at 121.921 kb on - strand at 121.921 kb on - strand at 121.932 kb on - strand at 121.976 kb on - strand at 121.979 kb on + strand at 122.071 kb on - strand at 122.079 kb on + strand at 122.079 kb on + strand at 122.079 kb on + strand at 122.095 kb on - strand at 122.206 kb on + strand at 122.206 kb on + strand at 122.263 kb on - strand at 122.601 kb on + strand, within Ac3H11_4819 at 122.602 kb on - strand, within Ac3H11_4819 at 122.602 kb on - strand, within Ac3H11_4819 at 122.621 kb on + strand, within Ac3H11_4819 at 122.645 kb on - strand, within Ac3H11_4819 at 122.645 kb on - strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.650 kb on + strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.651 kb on - strand, within Ac3H11_4819 at 122.730 kb on + strand, within Ac3H11_4819 at 122.730 kb on + strand, within Ac3H11_4819 at 122.730 kb on + strand, within Ac3H11_4819 at 122.730 kb on + strand, within Ac3H11_4819 at 122.730 kb on + strand, within Ac3H11_4819 at 122.730 kb on + strand, within Ac3H11_4819 at 122.731 kb on - strand, within Ac3H11_4819 at 122.731 kb on - strand, within Ac3H11_4819 at 122.731 kb on - strand, within Ac3H11_4819 at 122.731 kb on - strand, within Ac3H11_4819 at 122.731 kb on - strand, within Ac3H11_4819 at 122.731 kb on - strand, within Ac3H11_4819 at 122.731 kb on - strand, within Ac3H11_4819 at 122.731 kb on - strand, within Ac3H11_4819 at 122.795 kb on - strand, within Ac3H11_4819 at 122.795 kb on - strand, within Ac3H11_4819 at 122.795 kb on - strand, within Ac3H11_4819 at 122.795 kb on - strand, within Ac3H11_4819 at 122.795 kb on - strand, within Ac3H11_4819 at 122.827 kb on + strand, within Ac3H11_4819 at 122.827 kb on + strand, within Ac3H11_4819 at 122.827 kb on + strand, within Ac3H11_4819 at 122.828 kb on - strand, within Ac3H11_4819 at 123.112 kb on + strand, within Ac3H11_4819 at 123.112 kb on + strand, within Ac3H11_4819 at 123.112 kb on + strand, within Ac3H11_4819 at 123.194 kb on - strand, within Ac3H11_4819 at 123.194 kb on - strand, within Ac3H11_4819 at 123.194 kb on - strand, within Ac3H11_4819 at 123.194 kb on - strand, within Ac3H11_4819 at 123.194 kb on - strand, within Ac3H11_4819 at 123.645 kb on + strand at 123.645 kb on + strand at 123.645 kb on + strand at 123.645 kb on + strand at 123.645 kb on + strand at 123.645 kb on + strand at 123.646 kb on - strand at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.795 kb on + strand, within Ac3H11_4820 at 123.796 kb on - strand, within Ac3H11_4820 at 123.796 kb on - strand, within Ac3H11_4820 at 123.796 kb on - strand, within Ac3H11_4820 at 123.796 kb on - strand, within Ac3H11_4820 at 123.796 kb on - strand, within Ac3H11_4820 at 124.083 kb on + strand, within Ac3H11_4820 at 124.083 kb on + strand, within Ac3H11_4820 at 124.083 kb on + strand, within Ac3H11_4820 at 124.083 kb on + strand, within Ac3H11_4820 at 124.084 kb on - strand, within Ac3H11_4820 at 124.084 kb on - strand, within Ac3H11_4820 at 124.122 kb on + strand, within Ac3H11_4820 at 124.122 kb on + strand, within Ac3H11_4820 at 124.122 kb on + strand, within Ac3H11_4820 at 124.122 kb on + strand, within Ac3H11_4820 at 124.122 kb on + strand, within Ac3H11_4820 at 124.123 kb on - strand, within Ac3H11_4820 at 124.123 kb on - strand, within Ac3H11_4820 at 124.123 kb on - strand, within Ac3H11_4820 at 124.123 kb on - strand, within Ac3H11_4820 at 124.123 kb on - strand, within Ac3H11_4820 at 124.123 kb on - strand, within Ac3H11_4820 at 124.123 kb on - strand, within Ac3H11_4820 at 124.123 kb on - strand, within Ac3H11_4820 at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.185 kb on + strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.186 kb on - strand at 124.286 kb on + strand at 124.326 kb on + strand at 124.326 kb on + strand at 124.375 kb on + strand at 124.375 kb on + strand at 124.375 kb on + strand at 124.518 kb on + strand at 124.519 kb on - strand at 124.519 kb on - strand at 124.519 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.2 remove 121,285 + -0.3 121,290 - -0.4 121,298 - -0.1 121,337 + +1.4 121,338 - -2.5 121,338 - +0.4 121,338 - +0.8 121,435 - +0.8 121,455 - +0.4 121,496 + -0.1 121,497 - -0.1 121,528 + +0.7 121,602 + +0.3 121,602 + +0.1 121,603 - +2.2 121,603 - +0.9 121,603 - -0.3 121,603 - -1.7 121,608 + +1.3 121,608 + +0.6 121,608 + -0.4 121,608 + +0.1 121,609 - +0.7 121,609 - +0.3 121,609 - +0.2 121,610 + -0.4 121,610 + -0.2 121,610 + -1.9 121,611 - -0.1 121,611 - -0.4 121,611 - -1.2 121,611 - +2.2 121,615 + +1.5 121,615 + -0.8 121,615 + +0.2 121,616 - +0.0 121,616 - +1.5 121,635 + +0.6 121,635 + +0.2 121,635 + +0.8 121,635 + -0.8 121,635 + +1.4 121,636 - +1.0 121,636 - +1.5 121,636 - +1.1 121,636 - +0.2 121,636 - +0.8 121,636 - -0.4 121,651 + -0.2 121,651 + +0.1 121,651 + +0.2 121,652 - +0.8 121,652 - +0.8 121,652 - +1.5 121,664 + -0.8 121,664 + -1.7 121,665 - +0.9 121,700 + +0.3 121,700 + +1.2 121,700 + -0.0 121,700 + -0.3 121,700 + +0.2 121,700 + -2.2 121,700 + -1.4 121,700 + +1.3 121,700 + +0.3 121,700 + -0.4 121,701 - +0.0 121,701 - +0.8 121,701 - -0.7 121,701 - -1.7 121,701 - -0.5 121,701 - -0.2 121,701 - -0.2 121,701 - +0.3 121,701 - +1.5 121,701 - +0.6 121,734 + +1.3 121,734 + -0.1 121,734 + +0.0 121,734 + -0.8 121,734 + +0.2 121,734 + -0.2 121,734 + -0.1 121,735 - +0.1 121,735 - +0.9 121,735 - +1.0 121,735 - +1.8 121,735 - -0.7 121,735 - +0.8 121,753 + +1.5 121,753 + +0.3 121,753 + -0.5 121,753 + +0.1 121,753 + -0.3 121,753 + +0.9 121,753 + -0.2 121,753 + +2.9 121,753 + -0.5 121,753 + -2.7 121,753 + -0.4 121,754 - +0.8 121,754 - -0.3 121,754 - +0.6 121,754 - +0.5 121,754 - -0.6 121,754 - +0.3 121,754 - -0.9 121,754 - -0.7 121,754 - +1.3 121,754 - -1.3 121,775 + +0.3 121,781 + +5.0 121,784 + -0.8 121,784 + +0.8 121,784 + +0.2 121,784 + -0.3 121,784 + +0.3 121,785 - -1.7 121,785 - -1.0 121,785 - -1.0 121,785 - +0.5 121,807 - +0.2 121,811 - +1.2 121,824 + +2.7 121,825 - -0.8 121,890 + -1.2 121,890 + -0.1 121,890 + +0.9 121,891 - -1.8 121,913 + -1.2 121,920 + +1.6 121,920 + +0.7 121,920 + +0.1 121,920 + -3.0 121,921 - +0.3 121,921 - +0.3 121,932 - -0.2 121,976 - +0.6 121,979 + +1.5 122,071 - +0.9 122,079 + +0.4 122,079 + +0.1 122,079 + +0.2 122,095 - -0.5 122,206 + -0.4 122,206 + +1.0 122,263 - -0.1 122,601 + Ac3H11_4819 0.26 +1.2 122,602 - Ac3H11_4819 0.26 +1.2 122,602 - Ac3H11_4819 0.26 +0.5 122,621 + Ac3H11_4819 0.28 -1.1 122,645 - Ac3H11_4819 0.29 +0.6 122,645 - Ac3H11_4819 0.29 -1.8 122,650 + Ac3H11_4819 0.30 +0.2 122,650 + Ac3H11_4819 0.30 +0.2 122,650 + Ac3H11_4819 0.30 +1.4 122,650 + Ac3H11_4819 0.30 -0.8 122,650 + Ac3H11_4819 0.30 +1.0 122,650 + -1.0 122,650 + Ac3H11_4819 0.30 +0.1 122,650 + Ac3H11_4819 0.30 +0.2 122,650 + Ac3H11_4819 0.30 +1.2 122,650 + Ac3H11_4819 0.30 -2.1 122,650 + Ac3H11_4819 0.30 +0.5 122,650 + Ac3H11_4819 0.30 -1.3 122,650 + Ac3H11_4819 0.30 +1.2 122,651 - Ac3H11_4819 0.30 +0.9 122,651 - Ac3H11_4819 0.30 +1.0 122,651 - Ac3H11_4819 0.30 -0.3 122,651 - Ac3H11_4819 0.30 +0.1 122,651 - Ac3H11_4819 0.30 +0.7 122,651 - Ac3H11_4819 0.30 -0.3 122,651 - Ac3H11_4819 0.30 +0.3 122,651 - Ac3H11_4819 0.30 +0.5 122,651 - Ac3H11_4819 0.30 +1.3 122,651 - Ac3H11_4819 0.30 +0.2 122,730 + Ac3H11_4819 0.36 +0.0 122,730 + Ac3H11_4819 0.36 -2.0 122,730 + Ac3H11_4819 0.36 +0.7 122,730 + Ac3H11_4819 0.36 +0.1 122,730 + Ac3H11_4819 0.36 -0.7 122,730 + Ac3H11_4819 0.36 +1.3 122,731 - Ac3H11_4819 0.36 +1.3 122,731 - Ac3H11_4819 0.36 +0.4 122,731 - Ac3H11_4819 0.36 -0.2 122,731 - Ac3H11_4819 0.36 -2.8 122,731 - Ac3H11_4819 0.36 -1.2 122,731 - Ac3H11_4819 0.36 -0.1 122,731 - Ac3H11_4819 0.36 -0.8 122,731 - Ac3H11_4819 0.36 +0.6 122,795 - Ac3H11_4819 0.40 +0.0 122,795 - Ac3H11_4819 0.40 +0.6 122,795 - Ac3H11_4819 0.40 +0.2 122,795 - Ac3H11_4819 0.40 +1.2 122,795 - Ac3H11_4819 0.40 -0.4 122,827 + Ac3H11_4819 0.43 +1.2 122,827 + Ac3H11_4819 0.43 +0.3 122,827 + Ac3H11_4819 0.43 +0.6 122,828 - Ac3H11_4819 0.43 -0.1 123,112 + Ac3H11_4819 0.64 -0.4 123,112 + Ac3H11_4819 0.64 +1.2 123,112 + Ac3H11_4819 0.64 +1.2 123,194 - Ac3H11_4819 0.70 +0.8 123,194 - Ac3H11_4819 0.70 -0.5 123,194 - Ac3H11_4819 0.70 -3.2 123,194 - Ac3H11_4819 0.70 -2.4 123,194 - Ac3H11_4819 0.70 +0.1 123,645 + +0.3 123,645 + -0.4 123,645 + +1.8 123,645 + -0.9 123,645 + +0.5 123,645 + -1.2 123,646 - +1.2 123,795 + Ac3H11_4820 0.29 -0.2 123,795 + Ac3H11_4820 0.29 +0.2 123,795 + Ac3H11_4820 0.29 +0.4 123,795 + Ac3H11_4820 0.29 -0.3 123,795 + Ac3H11_4820 0.29 +2.2 123,795 + Ac3H11_4820 0.29 +1.2 123,795 + Ac3H11_4820 0.29 -0.6 123,795 + Ac3H11_4820 0.29 -0.7 123,795 + Ac3H11_4820 0.29 -0.2 123,795 + Ac3H11_4820 0.29 -0.8 123,795 + Ac3H11_4820 0.29 -0.5 123,796 - Ac3H11_4820 0.29 -1.4 123,796 - Ac3H11_4820 0.29 -0.5 123,796 - Ac3H11_4820 0.29 -0.4 123,796 - Ac3H11_4820 0.29 -1.1 123,796 - Ac3H11_4820 0.29 +1.1 124,083 + Ac3H11_4820 0.76 +1.4 124,083 + Ac3H11_4820 0.76 +0.6 124,083 + Ac3H11_4820 0.76 -1.5 124,083 + Ac3H11_4820 0.76 +0.2 124,084 - Ac3H11_4820 0.76 +0.4 124,084 - Ac3H11_4820 0.76 -0.0 124,122 + Ac3H11_4820 0.82 +0.9 124,122 + Ac3H11_4820 0.82 +1.6 124,122 + Ac3H11_4820 0.82 -3.1 124,122 + Ac3H11_4820 0.82 +0.1 124,122 + Ac3H11_4820 0.82 +0.8 124,123 - Ac3H11_4820 0.83 +0.8 124,123 - Ac3H11_4820 0.83 -0.2 124,123 - Ac3H11_4820 0.83 -0.6 124,123 - Ac3H11_4820 0.83 +0.8 124,123 - Ac3H11_4820 0.83 +0.5 124,123 - Ac3H11_4820 0.83 +0.9 124,123 - Ac3H11_4820 0.83 +0.7 124,123 - Ac3H11_4820 0.83 -1.2 124,185 + -0.6 124,185 + -0.4 124,185 + -1.3 124,185 + +0.4 124,185 + +2.2 124,185 + +1.1 124,185 + -0.2 124,185 + +0.1 124,185 + +1.3 124,185 + -0.4 124,185 + +0.8 124,185 + -0.2 124,185 + +1.2 124,185 + -2.1 124,185 + +1.1 124,185 + -0.3 124,185 + -0.0 124,185 + +2.9 124,185 + -0.7 124,186 - +0.7 124,186 - +0.3 124,186 - -1.2 124,186 - +0.8 124,186 - -0.1 124,186 - -0.9 124,186 - +0.3 124,186 - -0.2 124,186 - +0.3 124,186 - -1.0 124,186 - -0.2 124,286 + -0.6 124,326 + +1.2 124,326 + +0.2 124,375 + +1.2 124,375 + +1.0 124,375 + -0.4 124,518 + +0.8 124,519 - +0.1 124,519 - -1.9 124,519 - +2.4
Or see this region's nucleotide sequence