Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4819

Experiment: phage 93.2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_4819 and Ac3H11_4820 are separated by 23 nucleotidesAc3H11_4820 and Ac3H11_4821 are separated by 153 nucleotides Ac3H11_4819 - FOG: TPR repeat, at 122,250 to 123,596 _4819 Ac3H11_4820 - FIG00349859: hypothetical protein, at 123,620 to 124,228 _4820 Ac3H11_4821 - putative amidase, at 124,382 to 125,785 _4821 Position (kb) 122 123 124Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 121.285 kb on + strandat 121.290 kb on - strandat 121.298 kb on - strandat 121.337 kb on + strandat 121.338 kb on - strandat 121.338 kb on - strandat 121.338 kb on - strandat 121.435 kb on - strandat 121.455 kb on - strandat 121.496 kb on + strandat 121.497 kb on - strandat 121.528 kb on + strandat 121.602 kb on + strandat 121.602 kb on + strandat 121.603 kb on - strandat 121.603 kb on - strandat 121.603 kb on - strandat 121.603 kb on - strandat 121.608 kb on + strandat 121.608 kb on + strandat 121.608 kb on + strandat 121.608 kb on + strandat 121.609 kb on - strandat 121.609 kb on - strandat 121.609 kb on - strandat 121.610 kb on + strandat 121.610 kb on + strandat 121.610 kb on + strandat 121.611 kb on - strandat 121.611 kb on - strandat 121.611 kb on - strandat 121.611 kb on - strandat 121.615 kb on + strandat 121.615 kb on + strandat 121.615 kb on + strandat 121.616 kb on - strandat 121.616 kb on - strandat 121.635 kb on + strandat 121.635 kb on + strandat 121.635 kb on + strandat 121.635 kb on + strandat 121.635 kb on + strandat 121.636 kb on - strandat 121.636 kb on - strandat 121.636 kb on - strandat 121.636 kb on - strandat 121.636 kb on - strandat 121.636 kb on - strandat 121.651 kb on + strandat 121.651 kb on + strandat 121.651 kb on + strandat 121.652 kb on - strandat 121.652 kb on - strandat 121.652 kb on - strandat 121.664 kb on + strandat 121.664 kb on + strandat 121.665 kb on - strandat 121.700 kb on + strandat 121.700 kb on + strandat 121.700 kb on + strandat 121.700 kb on + strandat 121.700 kb on + strandat 121.700 kb on + strandat 121.700 kb on + strandat 121.700 kb on + strandat 121.700 kb on + strandat 121.700 kb on + strandat 121.701 kb on - strandat 121.701 kb on - strandat 121.701 kb on - strandat 121.701 kb on - strandat 121.701 kb on - strandat 121.701 kb on - strandat 121.701 kb on - strandat 121.701 kb on - strandat 121.701 kb on - strandat 121.701 kb on - strandat 121.734 kb on + strandat 121.734 kb on + strandat 121.734 kb on + strandat 121.734 kb on + strandat 121.734 kb on + strandat 121.734 kb on + strandat 121.734 kb on + strandat 121.735 kb on - strandat 121.735 kb on - strandat 121.735 kb on - strandat 121.735 kb on - strandat 121.735 kb on - strandat 121.735 kb on - strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.753 kb on + strandat 121.754 kb on - strandat 121.754 kb on - strandat 121.754 kb on - strandat 121.754 kb on - strandat 121.754 kb on - strandat 121.754 kb on - strandat 121.754 kb on - strandat 121.754 kb on - strandat 121.754 kb on - strandat 121.754 kb on - strandat 121.775 kb on + strandat 121.781 kb on + strandat 121.784 kb on + strandat 121.784 kb on + strandat 121.784 kb on + strandat 121.784 kb on + strandat 121.784 kb on + strandat 121.785 kb on - strandat 121.785 kb on - strandat 121.785 kb on - strandat 121.785 kb on - strandat 121.807 kb on - strandat 121.811 kb on - strandat 121.824 kb on + strandat 121.825 kb on - strandat 121.890 kb on + strandat 121.890 kb on + strandat 121.890 kb on + strandat 121.891 kb on - strandat 121.913 kb on + strandat 121.920 kb on + strandat 121.920 kb on + strandat 121.920 kb on + strandat 121.920 kb on + strandat 121.921 kb on - strandat 121.921 kb on - strandat 121.932 kb on - strandat 121.976 kb on - strandat 121.979 kb on + strandat 122.071 kb on - strandat 122.079 kb on + strandat 122.079 kb on + strandat 122.079 kb on + strandat 122.095 kb on - strandat 122.206 kb on + strandat 122.206 kb on + strandat 122.263 kb on - strandat 122.601 kb on + strand, within Ac3H11_4819at 122.602 kb on - strand, within Ac3H11_4819at 122.602 kb on - strand, within Ac3H11_4819at 122.621 kb on + strand, within Ac3H11_4819at 122.645 kb on - strand, within Ac3H11_4819at 122.645 kb on - strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strandat 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.650 kb on + strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.651 kb on - strand, within Ac3H11_4819at 122.730 kb on + strand, within Ac3H11_4819at 122.730 kb on + strand, within Ac3H11_4819at 122.730 kb on + strand, within Ac3H11_4819at 122.730 kb on + strand, within Ac3H11_4819at 122.730 kb on + strand, within Ac3H11_4819at 122.730 kb on + strand, within Ac3H11_4819at 122.731 kb on - strand, within Ac3H11_4819at 122.731 kb on - strand, within Ac3H11_4819at 122.731 kb on - strand, within Ac3H11_4819at 122.731 kb on - strand, within Ac3H11_4819at 122.731 kb on - strand, within Ac3H11_4819at 122.731 kb on - strand, within Ac3H11_4819at 122.731 kb on - strand, within Ac3H11_4819at 122.731 kb on - strand, within Ac3H11_4819at 122.795 kb on - strand, within Ac3H11_4819at 122.795 kb on - strand, within Ac3H11_4819at 122.795 kb on - strand, within Ac3H11_4819at 122.795 kb on - strand, within Ac3H11_4819at 122.795 kb on - strand, within Ac3H11_4819at 122.827 kb on + strand, within Ac3H11_4819at 122.827 kb on + strand, within Ac3H11_4819at 122.827 kb on + strand, within Ac3H11_4819at 122.828 kb on - strand, within Ac3H11_4819at 123.112 kb on + strand, within Ac3H11_4819at 123.112 kb on + strand, within Ac3H11_4819at 123.112 kb on + strand, within Ac3H11_4819at 123.194 kb on - strand, within Ac3H11_4819at 123.194 kb on - strand, within Ac3H11_4819at 123.194 kb on - strand, within Ac3H11_4819at 123.194 kb on - strand, within Ac3H11_4819at 123.194 kb on - strand, within Ac3H11_4819at 123.645 kb on + strandat 123.645 kb on + strandat 123.645 kb on + strandat 123.645 kb on + strandat 123.645 kb on + strandat 123.645 kb on + strandat 123.646 kb on - strandat 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.795 kb on + strand, within Ac3H11_4820at 123.796 kb on - strand, within Ac3H11_4820at 123.796 kb on - strand, within Ac3H11_4820at 123.796 kb on - strand, within Ac3H11_4820at 123.796 kb on - strand, within Ac3H11_4820at 123.796 kb on - strand, within Ac3H11_4820at 124.083 kb on + strand, within Ac3H11_4820at 124.083 kb on + strand, within Ac3H11_4820at 124.083 kb on + strand, within Ac3H11_4820at 124.083 kb on + strand, within Ac3H11_4820at 124.084 kb on - strand, within Ac3H11_4820at 124.084 kb on - strand, within Ac3H11_4820at 124.122 kb on + strand, within Ac3H11_4820at 124.122 kb on + strand, within Ac3H11_4820at 124.122 kb on + strand, within Ac3H11_4820at 124.122 kb on + strand, within Ac3H11_4820at 124.122 kb on + strand, within Ac3H11_4820at 124.123 kb on - strand, within Ac3H11_4820at 124.123 kb on - strand, within Ac3H11_4820at 124.123 kb on - strand, within Ac3H11_4820at 124.123 kb on - strand, within Ac3H11_4820at 124.123 kb on - strand, within Ac3H11_4820at 124.123 kb on - strand, within Ac3H11_4820at 124.123 kb on - strand, within Ac3H11_4820at 124.123 kb on - strand, within Ac3H11_4820at 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.185 kb on + strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.186 kb on - strandat 124.286 kb on + strandat 124.326 kb on + strandat 124.326 kb on + strandat 124.375 kb on + strandat 124.375 kb on + strandat 124.375 kb on + strandat 124.518 kb on + strandat 124.519 kb on - strandat 124.519 kb on - strandat 124.519 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction phage 93.2
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121,285 + -0.3
121,290 - -0.4
121,298 - -0.1
121,337 + +1.4
121,338 - -2.5
121,338 - +0.4
121,338 - +0.8
121,435 - +0.8
121,455 - +0.4
121,496 + -0.1
121,497 - -0.1
121,528 + +0.7
121,602 + +0.3
121,602 + +0.1
121,603 - +2.2
121,603 - +0.9
121,603 - -0.3
121,603 - -1.7
121,608 + +1.3
121,608 + +0.6
121,608 + -0.4
121,608 + +0.1
121,609 - +0.7
121,609 - +0.3
121,609 - +0.2
121,610 + -0.4
121,610 + -0.2
121,610 + -1.9
121,611 - -0.1
121,611 - -0.4
121,611 - -1.2
121,611 - +2.2
121,615 + +1.5
121,615 + -0.8
121,615 + +0.2
121,616 - +0.0
121,616 - +1.5
121,635 + +0.6
121,635 + +0.2
121,635 + +0.8
121,635 + -0.8
121,635 + +1.4
121,636 - +1.0
121,636 - +1.5
121,636 - +1.1
121,636 - +0.2
121,636 - +0.8
121,636 - -0.4
121,651 + -0.2
121,651 + +0.1
121,651 + +0.2
121,652 - +0.8
121,652 - +0.8
121,652 - +1.5
121,664 + -0.8
121,664 + -1.7
121,665 - +0.9
121,700 + +0.3
121,700 + +1.2
121,700 + -0.0
121,700 + -0.3
121,700 + +0.2
121,700 + -2.2
121,700 + -1.4
121,700 + +1.3
121,700 + +0.3
121,700 + -0.4
121,701 - +0.0
121,701 - +0.8
121,701 - -0.7
121,701 - -1.7
121,701 - -0.5
121,701 - -0.2
121,701 - -0.2
121,701 - +0.3
121,701 - +1.5
121,701 - +0.6
121,734 + +1.3
121,734 + -0.1
121,734 + +0.0
121,734 + -0.8
121,734 + +0.2
121,734 + -0.2
121,734 + -0.1
121,735 - +0.1
121,735 - +0.9
121,735 - +1.0
121,735 - +1.8
121,735 - -0.7
121,735 - +0.8
121,753 + +1.5
121,753 + +0.3
121,753 + -0.5
121,753 + +0.1
121,753 + -0.3
121,753 + +0.9
121,753 + -0.2
121,753 + +2.9
121,753 + -0.5
121,753 + -2.7
121,753 + -0.4
121,754 - +0.8
121,754 - -0.3
121,754 - +0.6
121,754 - +0.5
121,754 - -0.6
121,754 - +0.3
121,754 - -0.9
121,754 - -0.7
121,754 - +1.3
121,754 - -1.3
121,775 + +0.3
121,781 + +5.0
121,784 + -0.8
121,784 + +0.8
121,784 + +0.2
121,784 + -0.3
121,784 + +0.3
121,785 - -1.7
121,785 - -1.0
121,785 - -1.0
121,785 - +0.5
121,807 - +0.2
121,811 - +1.2
121,824 + +2.7
121,825 - -0.8
121,890 + -1.2
121,890 + -0.1
121,890 + +0.9
121,891 - -1.8
121,913 + -1.2
121,920 + +1.6
121,920 + +0.7
121,920 + +0.1
121,920 + -3.0
121,921 - +0.3
121,921 - +0.3
121,932 - -0.2
121,976 - +0.6
121,979 + +1.5
122,071 - +0.9
122,079 + +0.4
122,079 + +0.1
122,079 + +0.2
122,095 - -0.5
122,206 + -0.4
122,206 + +1.0
122,263 - -0.1
122,601 + Ac3H11_4819 0.26 +1.2
122,602 - Ac3H11_4819 0.26 +1.2
122,602 - Ac3H11_4819 0.26 +0.5
122,621 + Ac3H11_4819 0.28 -1.1
122,645 - Ac3H11_4819 0.29 +0.6
122,645 - Ac3H11_4819 0.29 -1.8
122,650 + Ac3H11_4819 0.30 +0.2
122,650 + Ac3H11_4819 0.30 +0.2
122,650 + Ac3H11_4819 0.30 +1.4
122,650 + Ac3H11_4819 0.30 -0.8
122,650 + Ac3H11_4819 0.30 +1.0
122,650 + -1.0
122,650 + Ac3H11_4819 0.30 +0.1
122,650 + Ac3H11_4819 0.30 +0.2
122,650 + Ac3H11_4819 0.30 +1.2
122,650 + Ac3H11_4819 0.30 -2.1
122,650 + Ac3H11_4819 0.30 +0.5
122,650 + Ac3H11_4819 0.30 -1.3
122,650 + Ac3H11_4819 0.30 +1.2
122,651 - Ac3H11_4819 0.30 +0.9
122,651 - Ac3H11_4819 0.30 +1.0
122,651 - Ac3H11_4819 0.30 -0.3
122,651 - Ac3H11_4819 0.30 +0.1
122,651 - Ac3H11_4819 0.30 +0.7
122,651 - Ac3H11_4819 0.30 -0.3
122,651 - Ac3H11_4819 0.30 +0.3
122,651 - Ac3H11_4819 0.30 +0.5
122,651 - Ac3H11_4819 0.30 +1.3
122,651 - Ac3H11_4819 0.30 +0.2
122,730 + Ac3H11_4819 0.36 +0.0
122,730 + Ac3H11_4819 0.36 -2.0
122,730 + Ac3H11_4819 0.36 +0.7
122,730 + Ac3H11_4819 0.36 +0.1
122,730 + Ac3H11_4819 0.36 -0.7
122,730 + Ac3H11_4819 0.36 +1.3
122,731 - Ac3H11_4819 0.36 +1.3
122,731 - Ac3H11_4819 0.36 +0.4
122,731 - Ac3H11_4819 0.36 -0.2
122,731 - Ac3H11_4819 0.36 -2.8
122,731 - Ac3H11_4819 0.36 -1.2
122,731 - Ac3H11_4819 0.36 -0.1
122,731 - Ac3H11_4819 0.36 -0.8
122,731 - Ac3H11_4819 0.36 +0.6
122,795 - Ac3H11_4819 0.40 +0.0
122,795 - Ac3H11_4819 0.40 +0.6
122,795 - Ac3H11_4819 0.40 +0.2
122,795 - Ac3H11_4819 0.40 +1.2
122,795 - Ac3H11_4819 0.40 -0.4
122,827 + Ac3H11_4819 0.43 +1.2
122,827 + Ac3H11_4819 0.43 +0.3
122,827 + Ac3H11_4819 0.43 +0.6
122,828 - Ac3H11_4819 0.43 -0.1
123,112 + Ac3H11_4819 0.64 -0.4
123,112 + Ac3H11_4819 0.64 +1.2
123,112 + Ac3H11_4819 0.64 +1.2
123,194 - Ac3H11_4819 0.70 +0.8
123,194 - Ac3H11_4819 0.70 -0.5
123,194 - Ac3H11_4819 0.70 -3.2
123,194 - Ac3H11_4819 0.70 -2.4
123,194 - Ac3H11_4819 0.70 +0.1
123,645 + +0.3
123,645 + -0.4
123,645 + +1.8
123,645 + -0.9
123,645 + +0.5
123,645 + -1.2
123,646 - +1.2
123,795 + Ac3H11_4820 0.29 -0.2
123,795 + Ac3H11_4820 0.29 +0.2
123,795 + Ac3H11_4820 0.29 +0.4
123,795 + Ac3H11_4820 0.29 -0.3
123,795 + Ac3H11_4820 0.29 +2.2
123,795 + Ac3H11_4820 0.29 +1.2
123,795 + Ac3H11_4820 0.29 -0.6
123,795 + Ac3H11_4820 0.29 -0.7
123,795 + Ac3H11_4820 0.29 -0.2
123,795 + Ac3H11_4820 0.29 -0.8
123,795 + Ac3H11_4820 0.29 -0.5
123,796 - Ac3H11_4820 0.29 -1.4
123,796 - Ac3H11_4820 0.29 -0.5
123,796 - Ac3H11_4820 0.29 -0.4
123,796 - Ac3H11_4820 0.29 -1.1
123,796 - Ac3H11_4820 0.29 +1.1
124,083 + Ac3H11_4820 0.76 +1.4
124,083 + Ac3H11_4820 0.76 +0.6
124,083 + Ac3H11_4820 0.76 -1.5
124,083 + Ac3H11_4820 0.76 +0.2
124,084 - Ac3H11_4820 0.76 +0.4
124,084 - Ac3H11_4820 0.76 -0.0
124,122 + Ac3H11_4820 0.82 +0.9
124,122 + Ac3H11_4820 0.82 +1.6
124,122 + Ac3H11_4820 0.82 -3.1
124,122 + Ac3H11_4820 0.82 +0.1
124,122 + Ac3H11_4820 0.82 +0.8
124,123 - Ac3H11_4820 0.83 +0.8
124,123 - Ac3H11_4820 0.83 -0.2
124,123 - Ac3H11_4820 0.83 -0.6
124,123 - Ac3H11_4820 0.83 +0.8
124,123 - Ac3H11_4820 0.83 +0.5
124,123 - Ac3H11_4820 0.83 +0.9
124,123 - Ac3H11_4820 0.83 +0.7
124,123 - Ac3H11_4820 0.83 -1.2
124,185 + -0.6
124,185 + -0.4
124,185 + -1.3
124,185 + +0.4
124,185 + +2.2
124,185 + +1.1
124,185 + -0.2
124,185 + +0.1
124,185 + +1.3
124,185 + -0.4
124,185 + +0.8
124,185 + -0.2
124,185 + +1.2
124,185 + -2.1
124,185 + +1.1
124,185 + -0.3
124,185 + -0.0
124,185 + +2.9
124,185 + -0.7
124,186 - +0.7
124,186 - +0.3
124,186 - -1.2
124,186 - +0.8
124,186 - -0.1
124,186 - -0.9
124,186 - +0.3
124,186 - -0.2
124,186 - +0.3
124,186 - -1.0
124,186 - -0.2
124,286 + -0.6
124,326 + +1.2
124,326 + +0.2
124,375 + +1.2
124,375 + +1.0
124,375 + -0.4
124,518 + +0.8
124,519 - +0.1
124,519 - -1.9
124,519 - +2.4

Or see this region's nucleotide sequence