Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_465

Experiment: phage 93.2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_464 and Ac3H11_465 are separated by 108 nucleotidesAc3H11_465 and Ac3H11_466 are separated by 92 nucleotides Ac3H11_464 - Probable inner membrane transmembrane protein, at 154,923 to 156,623 _464 Ac3H11_465 - LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent, at 156,732 to 156,986 _465 Ac3H11_466 - Transcription termination factor Rho, at 157,079 to 158,341 _466 Position (kb) 156 157Strain fitness (log2 ratio) -1 0 1at 156.660 kb on + strandat 156.660 kb on + strandat 156.661 kb on - strandat 156.733 kb on + strandat 156.733 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction phage 93.2
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156,660 + +1.0
156,660 + -0.5
156,661 - -1.7
156,733 + -0.6
156,733 + +0.1

Or see this region's nucleotide sequence