Experiment: phage 93.2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_382 and Ac3H11_383 are separated by 305 nucleotides Ac3H11_383 and Ac3H11_384 are separated by 156 nucleotides
Ac3H11_382 - TrkA-N:Sodium/hydrogen exchanger, at 59,252 to 60,991
_382
Ac3H11_383 - FIG01198699: hypothetical protein, at 61,297 to 63,186
_383
Ac3H11_384 - possible endonuclease/exonuclease/phosphatase family protein, at 63,343 to 64,386
_384
Position (kb) 61
62
63
64 Strain fitness (log2 ratio) -2
-1
0
1
2 at 60.367 kb on - strand, within Ac3H11_382 at 60.554 kb on + strand, within Ac3H11_382 at 60.555 kb on - strand, within Ac3H11_382 at 60.564 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand at 60.576 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand, within Ac3H11_382 at 60.577 kb on - strand, within Ac3H11_382 at 60.687 kb on + strand, within Ac3H11_382 at 60.688 kb on - strand, within Ac3H11_382 at 60.868 kb on + strand at 60.868 kb on + strand at 60.869 kb on - strand at 60.869 kb on - strand at 60.869 kb on - strand at 60.869 kb on - strand at 60.879 kb on + strand at 60.879 kb on + strand at 60.879 kb on + strand at 60.880 kb on - strand at 60.880 kb on - strand at 60.880 kb on - strand at 61.298 kb on + strand at 61.298 kb on + strand at 61.299 kb on - strand at 61.299 kb on - strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.581 kb on - strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.105 kb on + strand, within Ac3H11_383 at 62.105 kb on + strand, within Ac3H11_383 at 62.105 kb on + strand, within Ac3H11_383 at 62.105 kb on + strand, within Ac3H11_383 at 62.106 kb on - strand, within Ac3H11_383 at 62.106 kb on - strand, within Ac3H11_383 at 62.106 kb on - strand, within Ac3H11_383 at 62.106 kb on - strand, within Ac3H11_383 at 62.159 kb on + strand, within Ac3H11_383 at 62.195 kb on + strand, within Ac3H11_383 at 62.213 kb on + strand, within Ac3H11_383 at 62.213 kb on + strand, within Ac3H11_383 at 62.213 kb on + strand, within Ac3H11_383 at 62.213 kb on + strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.231 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.313 kb on - strand, within Ac3H11_383 at 62.313 kb on - strand, within Ac3H11_383 at 62.685 kb on + strand, within Ac3H11_383 at 62.685 kb on + strand, within Ac3H11_383 at 62.685 kb on + strand, within Ac3H11_383 at 62.686 kb on - strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.832 kb on - strand, within Ac3H11_383 at 62.832 kb on - strand, within Ac3H11_383 at 62.832 kb on - strand, within Ac3H11_383 at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.239 kb on - strand at 63.239 kb on - strand at 63.239 kb on - strand at 63.263 kb on - strand at 63.270 kb on + strand at 63.270 kb on + strand at 63.271 kb on - strand at 63.271 kb on - strand at 63.271 kb on - strand at 63.344 kb on + strand at 63.345 kb on - strand at 63.455 kb on + strand, within Ac3H11_384 at 63.455 kb on + strand, within Ac3H11_384 at 63.455 kb on + strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.605 kb on + strand, within Ac3H11_384 at 63.605 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.743 kb on - strand, within Ac3H11_384 at 63.743 kb on - strand, within Ac3H11_384 at 63.743 kb on - strand at 63.743 kb on - strand, within Ac3H11_384 at 64.036 kb on + strand, within Ac3H11_384 at 64.140 kb on - strand, within Ac3H11_384 at 64.140 kb on - strand, within Ac3H11_384
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.2 remove 60,367 - Ac3H11_382 0.64 -1.9 60,554 + Ac3H11_382 0.75 -0.0 60,555 - Ac3H11_382 0.75 +0.9 60,564 + Ac3H11_382 0.75 -1.6 60,576 + Ac3H11_382 0.76 +1.4 60,576 + -0.3 60,576 + Ac3H11_382 0.76 -0.9 60,576 + Ac3H11_382 0.76 +1.4 60,576 + Ac3H11_382 0.76 -0.3 60,577 - Ac3H11_382 0.76 +1.1 60,687 + Ac3H11_382 0.82 +0.8 60,688 - Ac3H11_382 0.83 +0.1 60,868 + -0.3 60,868 + -0.1 60,869 - -0.3 60,869 - +1.0 60,869 - +1.5 60,869 - +1.9 60,879 + +1.9 60,879 + -0.9 60,879 + -1.4 60,880 - +0.3 60,880 - -1.3 60,880 - -0.1 61,298 + +0.3 61,298 + +0.6 61,299 - +1.0 61,299 - -0.9 61,382 + +0.7 61,382 + -1.8 61,382 + +0.9 61,382 + +0.8 61,382 + -0.2 61,382 + +0.8 61,382 + -1.1 61,382 + -1.1 61,382 + -0.7 61,382 + -1.5 61,383 - -0.3 61,383 - -0.1 61,383 - -0.1 61,383 - +1.7 61,383 - -0.6 61,451 + -0.0 61,451 + +0.7 61,451 + +0.3 61,451 + +0.3 61,451 + +0.3 61,451 + -0.6 61,451 + -1.8 61,451 + -1.5 61,451 + -0.4 61,451 + +1.0 61,451 + +1.1 61,451 + -0.7 61,451 + -0.5 61,452 - +1.4 61,452 - -1.4 61,452 - -0.8 61,452 - +1.9 61,452 - -2.1 61,452 - +0.3 61,452 - +1.8 61,452 - +0.3 61,452 - +0.6 61,452 - -0.1 61,452 - -0.9 61,452 - -1.3 61,452 - -0.6 61,452 - -0.1 61,581 - Ac3H11_383 0.15 -0.3 62,102 + Ac3H11_383 0.43 -0.9 62,102 + Ac3H11_383 0.43 -1.2 62,102 + Ac3H11_383 0.43 +0.5 62,102 + Ac3H11_383 0.43 +0.2 62,102 + Ac3H11_383 0.43 +0.8 62,102 + Ac3H11_383 0.43 -0.5 62,102 + Ac3H11_383 0.43 -0.5 62,102 + Ac3H11_383 0.43 -0.6 62,102 + Ac3H11_383 0.43 +1.9 62,102 + Ac3H11_383 0.43 -1.1 62,102 + Ac3H11_383 0.43 +0.5 62,103 - Ac3H11_383 0.43 -0.1 62,103 - Ac3H11_383 0.43 +1.0 62,103 - Ac3H11_383 0.43 +1.1 62,103 - Ac3H11_383 0.43 +2.2 62,103 - Ac3H11_383 0.43 +1.9 62,103 - Ac3H11_383 0.43 +0.9 62,103 - Ac3H11_383 0.43 +1.0 62,103 - Ac3H11_383 0.43 -0.0 62,103 - Ac3H11_383 0.43 -0.5 62,103 - Ac3H11_383 0.43 -2.3 62,103 - Ac3H11_383 0.43 +0.3 62,105 + Ac3H11_383 0.43 +1.3 62,105 + Ac3H11_383 0.43 -1.5 62,105 + Ac3H11_383 0.43 +0.4 62,105 + Ac3H11_383 0.43 +0.5 62,106 - Ac3H11_383 0.43 +0.7 62,106 - Ac3H11_383 0.43 +0.7 62,106 - Ac3H11_383 0.43 -0.3 62,106 - Ac3H11_383 0.43 +0.4 62,159 + Ac3H11_383 0.46 +1.3 62,195 + Ac3H11_383 0.48 -0.9 62,213 + Ac3H11_383 0.48 +1.2 62,213 + Ac3H11_383 0.48 +1.1 62,213 + Ac3H11_383 0.48 +0.6 62,213 + Ac3H11_383 0.48 -1.5 62,214 - Ac3H11_383 0.49 +1.1 62,214 - Ac3H11_383 0.49 +0.6 62,214 - Ac3H11_383 0.49 -0.3 62,214 - Ac3H11_383 0.49 -0.3 62,214 - Ac3H11_383 0.49 -0.5 62,214 - Ac3H11_383 0.49 -0.6 62,231 + Ac3H11_383 0.49 -0.8 62,279 + Ac3H11_383 0.52 +0.1 62,279 + Ac3H11_383 0.52 -0.2 62,279 + Ac3H11_383 0.52 +0.5 62,279 + Ac3H11_383 0.52 +0.8 62,279 + Ac3H11_383 0.52 +0.4 62,279 + Ac3H11_383 0.52 -1.7 62,279 + Ac3H11_383 0.52 +0.9 62,280 - Ac3H11_383 0.52 -0.7 62,280 - Ac3H11_383 0.52 +0.7 62,280 - Ac3H11_383 0.52 +0.2 62,280 - Ac3H11_383 0.52 -1.2 62,280 - Ac3H11_383 0.52 +0.7 62,280 - Ac3H11_383 0.52 -0.4 62,280 - Ac3H11_383 0.52 -0.1 62,280 - Ac3H11_383 0.52 -0.2 62,280 - Ac3H11_383 0.52 +1.1 62,280 - Ac3H11_383 0.52 -0.1 62,313 - Ac3H11_383 0.54 +1.1 62,313 - Ac3H11_383 0.54 +0.9 62,685 + Ac3H11_383 0.73 +1.1 62,685 + Ac3H11_383 0.73 +0.3 62,685 + Ac3H11_383 0.73 -1.3 62,686 - Ac3H11_383 0.73 +0.2 62,786 + Ac3H11_383 0.79 -0.1 62,786 + Ac3H11_383 0.79 -0.1 62,786 + Ac3H11_383 0.79 -0.2 62,786 + Ac3H11_383 0.79 +0.7 62,787 - Ac3H11_383 0.79 +0.1 62,787 - Ac3H11_383 0.79 +0.3 62,787 - Ac3H11_383 0.79 -1.7 62,787 - Ac3H11_383 0.79 -0.2 62,832 - Ac3H11_383 0.81 -0.6 62,832 - Ac3H11_383 0.81 -0.4 62,832 - Ac3H11_383 0.81 +1.1 63,235 + +0.3 63,235 + +0.5 63,235 + +0.0 63,235 + +0.3 63,235 + -0.0 63,235 + +0.2 63,235 + +2.7 63,235 + +0.3 63,236 - +0.9 63,236 - -0.4 63,236 - -0.9 63,236 - +0.1 63,236 - -0.0 63,236 - -2.2 63,238 + +0.7 63,238 + +0.0 63,238 + -0.5 63,238 + -0.5 63,238 + +0.4 63,238 + -0.6 63,238 + +0.6 63,238 + +0.9 63,239 - -1.0 63,239 - -1.7 63,239 - -1.6 63,263 - -1.0 63,270 + +0.1 63,270 + +0.4 63,271 - -0.1 63,271 - +0.3 63,271 - +0.4 63,344 + -0.7 63,345 - -2.3 63,455 + Ac3H11_384 0.11 -0.7 63,455 + Ac3H11_384 0.11 +0.7 63,455 + Ac3H11_384 0.11 +0.0 63,456 - Ac3H11_384 0.11 -2.1 63,456 - Ac3H11_384 0.11 +2.0 63,456 - Ac3H11_384 0.11 +0.9 63,456 - Ac3H11_384 0.11 +0.4 63,605 + Ac3H11_384 0.25 +0.4 63,605 + Ac3H11_384 0.25 -0.1 63,742 + Ac3H11_384 0.38 -0.9 63,742 + Ac3H11_384 0.38 -0.1 63,742 + Ac3H11_384 0.38 +0.5 63,742 + Ac3H11_384 0.38 -0.5 63,743 - Ac3H11_384 0.38 +0.3 63,743 - Ac3H11_384 0.38 -0.1 63,743 - +0.5 63,743 - Ac3H11_384 0.38 +0.7 64,036 + Ac3H11_384 0.66 -1.6 64,140 - Ac3H11_384 0.76 -0.7 64,140 - Ac3H11_384 0.76 -0.1
Or see this region's nucleotide sequence