Experiment: phage 93.2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_248 and Ac3H11_249 overlap by 13 nucleotides Ac3H11_249 and Ac3H11_250 overlap by 42 nucleotides
Ac3H11_248 - Ferrichrome-iron receptor, at 64,823 to 66,955
_248
Ac3H11_249 - hypothetical protein, at 66,943 to 67,128
_249
Ac3H11_250 - Ferrichrome-iron receptor, at 67,087 to 69,255
_250
Position (kb) 66
67
68 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 65.999 kb on + strand, within Ac3H11_248 at 65.999 kb on + strand, within Ac3H11_248 at 66.041 kb on + strand, within Ac3H11_248 at 66.041 kb on + strand, within Ac3H11_248 at 66.042 kb on - strand, within Ac3H11_248 at 66.042 kb on - strand, within Ac3H11_248 at 66.087 kb on + strand, within Ac3H11_248 at 66.200 kb on + strand, within Ac3H11_248 at 66.200 kb on + strand, within Ac3H11_248 at 66.201 kb on - strand, within Ac3H11_248 at 66.201 kb on - strand, within Ac3H11_248 at 66.674 kb on + strand, within Ac3H11_248 at 66.774 kb on - strand at 66.861 kb on - strand at 66.864 kb on - strand at 66.864 kb on - strand at 67.010 kb on + strand, within Ac3H11_249 at 67.011 kb on - strand, within Ac3H11_249 at 67.423 kb on + strand, within Ac3H11_250 at 67.424 kb on - strand, within Ac3H11_250 at 67.424 kb on - strand, within Ac3H11_250 at 67.424 kb on - strand, within Ac3H11_250 at 67.477 kb on + strand, within Ac3H11_250 at 67.478 kb on - strand, within Ac3H11_250 at 67.534 kb on + strand, within Ac3H11_250 at 67.582 kb on + strand, within Ac3H11_250 at 67.582 kb on + strand, within Ac3H11_250 at 67.583 kb on - strand, within Ac3H11_250 at 67.936 kb on + strand, within Ac3H11_250 at 67.937 kb on - strand, within Ac3H11_250 at 67.987 kb on + strand, within Ac3H11_250 at 67.987 kb on + strand, within Ac3H11_250 at 68.089 kb on + strand, within Ac3H11_250 at 68.101 kb on + strand, within Ac3H11_250 at 68.101 kb on + strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.2 remove 65,999 + Ac3H11_248 0.55 -1.0 65,999 + Ac3H11_248 0.55 +0.3 66,041 + Ac3H11_248 0.57 -0.1 66,041 + Ac3H11_248 0.57 +0.4 66,042 - Ac3H11_248 0.57 +0.4 66,042 - Ac3H11_248 0.57 -1.6 66,087 + Ac3H11_248 0.59 +0.4 66,200 + Ac3H11_248 0.65 -1.9 66,200 + Ac3H11_248 0.65 +0.4 66,201 - Ac3H11_248 0.65 +0.1 66,201 - Ac3H11_248 0.65 -0.6 66,674 + Ac3H11_248 0.87 -0.0 66,774 - +0.6 66,861 - -1.8 66,864 - +1.2 66,864 - +0.4 67,010 + Ac3H11_249 0.36 -2.2 67,011 - Ac3H11_249 0.37 -0.8 67,423 + Ac3H11_250 0.15 +1.1 67,424 - Ac3H11_250 0.16 +0.9 67,424 - Ac3H11_250 0.16 +0.5 67,424 - Ac3H11_250 0.16 +1.1 67,477 + Ac3H11_250 0.18 -0.9 67,478 - Ac3H11_250 0.18 -0.4 67,534 + Ac3H11_250 0.21 -0.5 67,582 + Ac3H11_250 0.23 +0.9 67,582 + Ac3H11_250 0.23 -0.3 67,583 - Ac3H11_250 0.23 +0.6 67,936 + Ac3H11_250 0.39 -0.9 67,937 - Ac3H11_250 0.39 +0.3 67,987 + Ac3H11_250 0.41 -0.0 67,987 + Ac3H11_250 0.41 -0.2 68,089 + Ac3H11_250 0.46 -1.4 68,101 + Ac3H11_250 0.47 +2.5 68,101 + Ac3H11_250 0.47 -0.4 68,102 - Ac3H11_250 0.47 -1.4 68,102 - Ac3H11_250 0.47 -0.6 68,102 - Ac3H11_250 0.47 +3.9 68,102 - Ac3H11_250 0.47 +0.0 68,102 - Ac3H11_250 0.47 -1.3
Or see this region's nucleotide sequence