Experiment: phage 93.2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_240 and Ac3H11_241 are separated by 809 nucleotides Ac3H11_241 and Ac3H11_242 are separated by 99 nucleotides
Ac3H11_240 - hypothetical protein, at 56,490 to 57,179
_240
Ac3H11_241 - hypothetical protein, at 57,989 to 58,414
_241
Ac3H11_242 - Mobile element protein, at 58,514 to 58,663
_242
Position (kb) 57
58
59 Strain fitness (log2 ratio) -2
-1
0
1
2 at 57.075 kb on + strand, within Ac3H11_240 at 57.223 kb on - strand at 57.279 kb on + strand at 57.280 kb on - strand at 57.280 kb on - strand at 57.439 kb on + strand at 57.578 kb on - strand at 57.578 kb on - strand at 57.578 kb on - strand at 57.578 kb on - strand at 57.750 kb on + strand at 57.750 kb on + strand at 57.750 kb on + strand at 57.751 kb on - strand at 57.781 kb on + strand at 57.782 kb on - strand at 57.782 kb on - strand at 57.782 kb on - strand at 57.801 kb on + strand at 57.887 kb on - strand at 57.937 kb on + strand at 57.938 kb on - strand at 57.938 kb on - strand at 57.938 kb on - strand at 57.961 kb on - strand at 57.993 kb on - strand at 57.993 kb on - strand at 58.013 kb on + strand at 58.014 kb on - strand at 58.047 kb on + strand, within Ac3H11_241 at 58.047 kb on + strand, within Ac3H11_241 at 58.047 kb on + strand, within Ac3H11_241 at 58.047 kb on + strand, within Ac3H11_241 at 58.048 kb on - strand, within Ac3H11_241 at 58.048 kb on - strand, within Ac3H11_241 at 58.048 kb on - strand, within Ac3H11_241 at 58.048 kb on - strand, within Ac3H11_241 at 58.097 kb on + strand, within Ac3H11_241 at 58.097 kb on + strand, within Ac3H11_241 at 58.097 kb on + strand, within Ac3H11_241 at 58.097 kb on + strand, within Ac3H11_241 at 58.098 kb on - strand, within Ac3H11_241 at 58.098 kb on - strand, within Ac3H11_241 at 58.098 kb on - strand, within Ac3H11_241 at 58.098 kb on - strand, within Ac3H11_241 at 58.134 kb on + strand, within Ac3H11_241 at 58.159 kb on - strand, within Ac3H11_241 at 58.159 kb on - strand, within Ac3H11_241 at 58.186 kb on - strand, within Ac3H11_241 at 58.186 kb on - strand, within Ac3H11_241 at 58.186 kb on - strand, within Ac3H11_241 at 58.245 kb on + strand, within Ac3H11_241 at 58.245 kb on + strand, within Ac3H11_241 at 58.370 kb on + strand, within Ac3H11_241 at 58.371 kb on - strand, within Ac3H11_241 at 58.425 kb on + strand at 58.425 kb on + strand at 58.425 kb on + strand at 58.425 kb on + strand at 58.425 kb on + strand at 58.426 kb on - strand at 58.426 kb on - strand at 58.426 kb on - strand at 58.426 kb on - strand at 58.516 kb on - strand at 58.540 kb on - strand, within Ac3H11_242 at 58.540 kb on - strand, within Ac3H11_242
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.2 remove 57,075 + Ac3H11_240 0.85 +1.2 57,223 - +0.2 57,279 + +1.9 57,280 - +1.1 57,280 - +1.4 57,439 + +1.3 57,578 - -0.7 57,578 - -0.0 57,578 - +0.3 57,578 - -0.7 57,750 + -0.3 57,750 + -0.3 57,750 + -1.0 57,751 - -0.3 57,781 + -0.5 57,782 - +0.1 57,782 - -0.9 57,782 - +1.3 57,801 + -0.4 57,887 - -0.6 57,937 + +1.9 57,938 - +2.2 57,938 - +0.4 57,938 - +1.1 57,961 - -0.2 57,993 - +1.3 57,993 - -0.1 58,013 + -1.2 58,014 - -0.1 58,047 + Ac3H11_241 0.14 +0.1 58,047 + Ac3H11_241 0.14 -1.8 58,047 + Ac3H11_241 0.14 +2.1 58,047 + Ac3H11_241 0.14 -0.7 58,048 - Ac3H11_241 0.14 +0.2 58,048 - Ac3H11_241 0.14 -0.3 58,048 - Ac3H11_241 0.14 +0.8 58,048 - Ac3H11_241 0.14 +0.5 58,097 + Ac3H11_241 0.25 -0.2 58,097 + Ac3H11_241 0.25 -1.7 58,097 + Ac3H11_241 0.25 -0.0 58,097 + Ac3H11_241 0.25 -0.3 58,098 - Ac3H11_241 0.26 -0.1 58,098 - Ac3H11_241 0.26 -1.5 58,098 - Ac3H11_241 0.26 -1.1 58,098 - Ac3H11_241 0.26 -0.0 58,134 + Ac3H11_241 0.34 -1.9 58,159 - Ac3H11_241 0.40 +0.1 58,159 - Ac3H11_241 0.40 +0.6 58,186 - Ac3H11_241 0.46 -0.0 58,186 - Ac3H11_241 0.46 -0.0 58,186 - Ac3H11_241 0.46 -0.3 58,245 + Ac3H11_241 0.60 -1.3 58,245 + Ac3H11_241 0.60 -0.1 58,370 + Ac3H11_241 0.89 -0.7 58,371 - Ac3H11_241 0.90 +0.5 58,425 + -0.8 58,425 + +0.3 58,425 + -0.6 58,425 + +0.4 58,425 + -0.8 58,426 - -0.1 58,426 - -0.4 58,426 - +1.0 58,426 - +0.1 58,516 - -1.8 58,540 - Ac3H11_242 0.17 -0.8 58,540 - Ac3H11_242 0.17 +0.8
Or see this region's nucleotide sequence