Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_233

Experiment: phage 93.2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_232 and Ac3H11_233 are separated by 183 nucleotidesAc3H11_233 and Ac3H11_234 are separated by 286 nucleotides Ac3H11_232 - Alkyl hydroperoxide reductase protein F (EC 1.6.4.-), at 46,713 to 48,290 _232 Ac3H11_233 - Alkyl hydroperoxide reductase protein C (EC 1.6.4.-), at 48,474 to 49,049 _233 Ac3H11_234 - Bacterioferritin, at 49,336 to 49,812 _234 Position (kb) 48 49 50Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 47.602 kb on + strand, within Ac3H11_232at 47.603 kb on - strand, within Ac3H11_232at 47.654 kb on - strand, within Ac3H11_232at 47.921 kb on - strand, within Ac3H11_232at 47.921 kb on - strandat 48.253 kb on + strandat 48.317 kb on + strandat 48.318 kb on - strandat 48.318 kb on - strandat 48.318 kb on - strandat 48.318 kb on - strandat 48.318 kb on - strandat 48.318 kb on - strandat 48.475 kb on + strandat 48.476 kb on - strandat 48.476 kb on - strandat 48.569 kb on - strand, within Ac3H11_233at 48.865 kb on + strandat 49.062 kb on - strandat 49.093 kb on + strandat 49.094 kb on - strandat 49.152 kb on + strandat 49.153 kb on - strandat 49.153 kb on - strandat 49.153 kb on - strandat 49.310 kb on + strandat 49.311 kb on - strandat 49.311 kb on - strandat 49.380 kb on + strandat 49.380 kb on + strandat 49.380 kb on + strandat 49.381 kb on - strandat 49.381 kb on - strandat 49.381 kb on - strandat 49.381 kb on - strandat 49.408 kb on + strand, within Ac3H11_234at 49.409 kb on - strand, within Ac3H11_234at 49.420 kb on + strand, within Ac3H11_234at 49.420 kb on + strand, within Ac3H11_234at 49.468 kb on + strand, within Ac3H11_234at 49.468 kb on + strand, within Ac3H11_234at 49.469 kb on - strand, within Ac3H11_234at 49.675 kb on + strand, within Ac3H11_234at 49.676 kb on - strand, within Ac3H11_234at 49.780 kb on + strandat 49.780 kb on + strandat 49.780 kb on + strandat 49.781 kb on - strandat 49.781 kb on - strandat 50.038 kb on + strandat 50.038 kb on + strandat 50.038 kb on + strandat 50.039 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction phage 93.2
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47,602 + Ac3H11_232 0.56 +0.1
47,603 - Ac3H11_232 0.56 +3.5
47,654 - Ac3H11_232 0.60 -0.9
47,921 - Ac3H11_232 0.77 -1.9
47,921 - -0.8
48,253 + +0.8
48,317 + -2.6
48,318 - +0.5
48,318 - +0.4
48,318 - -0.0
48,318 - +0.4
48,318 - +1.0
48,318 - -0.9
48,475 + +0.1
48,476 - -0.3
48,476 - +0.1
48,569 - Ac3H11_233 0.16 -1.8
48,865 + -2.8
49,062 - +0.1
49,093 + +0.6
49,094 - -0.5
49,152 + -0.8
49,153 - -0.4
49,153 - +0.1
49,153 - +0.6
49,310 + -1.1
49,311 - +1.5
49,311 - -2.0
49,380 + -0.8
49,380 + +1.4
49,380 + +3.0
49,381 - +0.8
49,381 - +0.7
49,381 - +0.7
49,381 - -1.4
49,408 + Ac3H11_234 0.15 +0.3
49,409 - Ac3H11_234 0.15 -1.9
49,420 + Ac3H11_234 0.18 -0.7
49,420 + Ac3H11_234 0.18 -1.6
49,468 + Ac3H11_234 0.28 -0.7
49,468 + Ac3H11_234 0.28 -0.8
49,469 - Ac3H11_234 0.28 -2.4
49,675 + Ac3H11_234 0.71 -0.9
49,676 - Ac3H11_234 0.71 -0.7
49,780 + -2.0
49,780 + +0.7
49,780 + -0.1
49,781 - -2.3
49,781 - -2.6
50,038 + +0.2
50,038 + +0.5
50,038 + +0.2
50,039 - +1.5

Or see this region's nucleotide sequence