Experiment: phage 93.2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2139 and Ac3H11_2140 are separated by 150 nucleotides Ac3H11_2140 and Ac3H11_2141 are separated by 169 nucleotides Ac3H11_2141 and Ac3H11_2142 are separated by 316 nucleotides
Ac3H11_2139 - Translation elongation factor G, at 369,138 to 371,240
_2139
Ac3H11_2140 - SSU ribosomal protein S7p (S5e), at 371,391 to 371,864
_2140
Ac3H11_2141 - SSU ribosomal protein S12p (S23e), at 372,034 to 372,411
_2141
Ac3H11_2142 - D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4), at 372,728 to 373,897
_2142
Position (kb) 371
372 Strain fitness (log2 ratio) -2
-1
0
1
2 at 372.511 kb on - strand at 372.511 kb on - strand at 372.607 kb on - strand at 372.729 kb on + strand at 372.729 kb on + strand at 372.729 kb on + strand at 372.729 kb on + strand at 372.729 kb on + strand at 372.729 kb on + strand at 372.730 kb on - strand at 372.730 kb on - strand at 372.730 kb on - strand at 372.730 kb on - strand at 372.730 kb on - strand at 372.730 kb on - strand at 372.730 kb on - strand at 372.730 kb on - strand at 372.734 kb on - strand at 372.734 kb on - strand at 372.734 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.2 remove 372,511 - -0.0 372,511 - +0.3 372,607 - -0.6 372,729 + -0.4 372,729 + -0.9 372,729 + -0.0 372,729 + +2.4 372,729 + -0.0 372,729 + -0.9 372,730 - +0.4 372,730 - -0.4 372,730 - -0.1 372,730 - +1.3 372,730 - -2.7 372,730 - +0.5 372,730 - +0.5 372,730 - -1.3 372,734 - -0.6 372,734 - -0.9 372,734 - +0.1
Or see this region's nucleotide sequence