Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2138

Experiment: phage 93.2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_2137 and Ac3H11_2138 are separated by 30 nucleotidesAc3H11_2138 and Ac3H11_2139 overlap by 23 nucleotides Ac3H11_2137 - Translation elongation factor Tu, at 367,505 to 368,995 _2137 Ac3H11_2138 - hypothetical protein, at 369,026 to 369,160 _2138 Ac3H11_2139 - Translation elongation factor G, at 369,138 to 371,240 _2139 Position (kb) 369 370Strain fitness (log2 ratio) -1 0 1at 369.136 kb on - strand, within Ac3H11_2138at 369.136 kb on - strand, within Ac3H11_2138at 369.136 kb on - strand, within Ac3H11_2138at 369.136 kb on - strand, within Ac3H11_2138at 369.136 kb on - strand, within Ac3H11_2138at 369.136 kb on - strand, within Ac3H11_2138at 369.136 kb on - strand, within Ac3H11_2138at 369.136 kb on - strand, within Ac3H11_2138at 369.140 kb on - strandat 369.140 kb on - strandat 369.140 kb on - strandat 369.140 kb on - strandat 369.140 kb on - strandat 369.140 kb on - strandat 369.140 kb on - strandat 369.140 kb on - strandat 369.140 kb on - strandat 369.140 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction phage 93.2
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369,136 - Ac3H11_2138 0.81 -1.1
369,136 - Ac3H11_2138 0.81 -0.7
369,136 - Ac3H11_2138 0.81 -0.1
369,136 - Ac3H11_2138 0.81 -0.4
369,136 - Ac3H11_2138 0.81 -0.2
369,136 - Ac3H11_2138 0.81 -1.2
369,136 - Ac3H11_2138 0.81 -0.6
369,136 - Ac3H11_2138 0.81 -0.8
369,140 - -1.5
369,140 - -0.7
369,140 - -0.7
369,140 - -1.4
369,140 - -0.3
369,140 - -1.5
369,140 - -1.5
369,140 - -0.5
369,140 - -0.6
369,140 - -0.5

Or see this region's nucleotide sequence