Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2136

Experiment: phage 93.2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_2134 and Ac3H11_2135 overlap by 1 nucleotidesAc3H11_2135 and Ac3H11_2136 are separated by 225 nucleotidesAc3H11_2136 and Ac3H11_2137 are separated by 26 nucleotides Ac3H11_2134 - LSU ribosomal protein L4p (L1e), at 365,647 to 366,267 _2134 Ac3H11_2135 - LSU ribosomal protein L3p (L3e), at 366,267 to 366,941 _2135 Ac3H11_2136 - SSU ribosomal protein S10p (S20e), at 367,167 to 367,478 _2136 Ac3H11_2137 - Translation elongation factor Tu, at 367,505 to 368,995 _2137 Position (kb) 367 368Strain fitness (log2 ratio) -1 0 1at 367.093 kb on - strandat 367.168 kb on + strandat 367.168 kb on + strandat 367.168 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction phage 93.2
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367,093 - +0.1
367,168 + -0.9
367,168 + -0.3
367,168 + -0.1

Or see this region's nucleotide sequence