Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1920

Experiment: phage 93.2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1920 and Ac3H11_1921 are separated by 895 nucleotides Ac3H11_1920 - Mobile element protein, at 129,841 to 129,954 _1920 Ac3H11_1921 - Acyclic terpenes utilization regulator AtuR, TetR family, at 130,850 to 131,575 _1921 Position (kb) 129 130Strain fitness (log2 ratio) -2 -1 0 1 2at 129.952 kb on + strandat 129.995 kb on + strandat 129.995 kb on + strandat 130.697 kb on + strandat 130.697 kb on + strandat 130.739 kb on - strandat 130.826 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction phage 93.2
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129,952 + +1.2
129,995 + -1.9
129,995 + -1.4
130,697 + -0.4
130,697 + +2.1
130,739 - -0.4
130,826 + -0.9

Or see this region's nucleotide sequence