Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_933 and Ac3H11_1044 are separated by 94 nucleotides Ac3H11_1044 and Ac3H11_934 are separated by 78 nucleotides Ac3H11_934 and Ac3H11_935 are separated by 122 nucleotides Ac3H11_935 and Ac3H11_936 are separated by 102 nucleotides
Ac3H11_933 - Probable transmembrane drug efflux protein, at 47,990 to 51,172
_933
Ac3H11_1044 - tRNA-Leu-TAG, at 51,267 to 51,350
_1044
Ac3H11_934 - Cell division trigger factor (EC 5.2.1.8), at 51,429 to 52,742
_934
Ac3H11_935 - ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92), at 52,865 to 53,473
_935
Ac3H11_936 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 53,576 to 54,841
_936
Position (kb)
51
52
53 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 50.501 kb on + strand, within Ac3H11_933 at 50.501 kb on + strand, within Ac3H11_933 at 50.502 kb on - strand, within Ac3H11_933 at 50.502 kb on - strand, within Ac3H11_933 at 50.835 kb on + strand, within Ac3H11_933 at 50.835 kb on + strand, within Ac3H11_933 at 50.835 kb on + strand, within Ac3H11_933 at 50.835 kb on + strand, within Ac3H11_933 at 51.116 kb on + strand at 51.116 kb on + strand at 51.116 kb on + strand at 51.116 kb on + strand at 51.116 kb on + strand at 51.116 kb on + strand at 51.116 kb on + strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.117 kb on - strand at 51.201 kb on + strand at 51.201 kb on + strand at 51.202 kb on - strand at 51.260 kb on + strand at 51.261 kb on - strand at 51.261 kb on - strand at 51.287 kb on - strand, within Ac3H11_1044 at 51.287 kb on - strand, within Ac3H11_1044 at 51.301 kb on + strand, within Ac3H11_1044 at 51.301 kb on + strand, within Ac3H11_1044 at 51.301 kb on + strand, within Ac3H11_1044 at 51.301 kb on + strand, within Ac3H11_1044 at 51.301 kb on + strand, within Ac3H11_1044 at 51.302 kb on - strand, within Ac3H11_1044 at 51.302 kb on - strand, within Ac3H11_1044 at 51.302 kb on - strand, within Ac3H11_1044 at 51.302 kb on - strand, within Ac3H11_1044 at 51.302 kb on - strand, within Ac3H11_1044 at 51.302 kb on - strand, within Ac3H11_1044 at 51.415 kb on + strand at 51.415 kb on + strand at 51.415 kb on + strand at 51.415 kb on + strand at 51.415 kb on + strand at 51.415 kb on + strand at 51.416 kb on - strand at 51.416 kb on - strand at 51.416 kb on - strand at 51.416 kb on - strand at 51.416 kb on - strand at 51.416 kb on - strand at 51.416 kb on - strand at 51.416 kb on - strand at 51.416 kb on - strand at 51.424 kb on + strand at 51.424 kb on + strand at 51.424 kb on + strand at 51.425 kb on - strand at 51.425 kb on - strand at 51.437 kb on + strand at 51.437 kb on + strand at 51.438 kb on - strand at 51.600 kb on + strand, within Ac3H11_934 at 51.600 kb on + strand, within Ac3H11_934 at 51.601 kb on - strand, within Ac3H11_934 at 51.606 kb on + strand, within Ac3H11_934 at 51.606 kb on + strand, within Ac3H11_934 at 51.618 kb on + strand, within Ac3H11_934 at 51.618 kb on + strand, within Ac3H11_934 at 51.619 kb on - strand, within Ac3H11_934 at 52.095 kb on + strand, within Ac3H11_934 at 52.095 kb on + strand, within Ac3H11_934 at 52.095 kb on + strand, within Ac3H11_934 at 52.095 kb on + strand, within Ac3H11_934 at 52.096 kb on - strand, within Ac3H11_934 at 52.096 kb on - strand, within Ac3H11_934 at 52.575 kb on + strand, within Ac3H11_934 at 52.575 kb on + strand, within Ac3H11_934 at 52.576 kb on - strand, within Ac3H11_934 at 52.576 kb on - strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.606 kb on - strand, within Ac3H11_934 at 52.606 kb on - strand, within Ac3H11_934 at 52.838 kb on + strand at 52.839 kb on - strand at 52.843 kb on + strand at 53.525 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 50,501 + Ac3H11_933 0.79 -0.0 50,501 + Ac3H11_933 0.79 -0.6 50,502 - Ac3H11_933 0.79 +0.8 50,502 - Ac3H11_933 0.79 +0.3 50,835 + Ac3H11_933 0.89 -0.5 50,835 + Ac3H11_933 0.89 -0.1 50,835 + Ac3H11_933 0.89 +0.3 50,835 + Ac3H11_933 0.89 -0.9 51,116 + +0.6 51,116 + +0.4 51,116 + +0.7 51,116 + -1.3 51,116 + -0.8 51,116 + -0.5 51,116 + +0.5 51,117 - -2.8 51,117 - -2.3 51,117 - -1.6 51,117 - +0.3 51,117 - -2.7 51,117 - -1.1 51,117 - +0.1 51,117 - +0.0 51,117 - -0.9 51,117 - +0.0 51,117 - +1.0 51,117 - -1.7 51,117 - -0.7 51,201 + -0.5 51,201 + -0.9 51,202 - -0.7 51,260 + +0.5 51,261 - -0.9 51,261 - -2.5 51,287 - Ac3H11_1044 0.24 +1.9 51,287 - Ac3H11_1044 0.24 +0.1 51,301 + Ac3H11_1044 0.40 -1.9 51,301 + Ac3H11_1044 0.40 -2.7 51,301 + Ac3H11_1044 0.40 -0.6 51,301 + Ac3H11_1044 0.40 -1.3 51,301 + Ac3H11_1044 0.40 -2.1 51,302 - Ac3H11_1044 0.42 -0.9 51,302 - Ac3H11_1044 0.42 +0.3 51,302 - Ac3H11_1044 0.42 -0.3 51,302 - Ac3H11_1044 0.42 +0.9 51,302 - Ac3H11_1044 0.42 -1.8 51,302 - Ac3H11_1044 0.42 -0.9 51,415 + -0.5 51,415 + -1.0 51,415 + +0.5 51,415 + +0.9 51,415 + +1.2 51,415 + -0.1 51,416 - +0.4 51,416 - +1.8 51,416 - +0.7 51,416 - +1.3 51,416 - +0.1 51,416 - -0.1 51,416 - +1.2 51,416 - +0.1 51,416 - +0.1 51,424 + -0.4 51,424 + +0.6 51,424 + -0.8 51,425 - +0.3 51,425 - +1.5 51,437 + +1.5 51,437 + +0.4 51,438 - -0.1 51,600 + Ac3H11_934 0.13 +1.2 51,600 + Ac3H11_934 0.13 +0.8 51,601 - Ac3H11_934 0.13 -0.8 51,606 + Ac3H11_934 0.13 -1.5 51,606 + Ac3H11_934 0.13 +2.9 51,618 + Ac3H11_934 0.14 +1.6 51,618 + Ac3H11_934 0.14 +1.2 51,619 - Ac3H11_934 0.14 +2.1 52,095 + Ac3H11_934 0.51 +0.9 52,095 + Ac3H11_934 0.51 +0.1 52,095 + Ac3H11_934 0.51 -1.1 52,095 + Ac3H11_934 0.51 +0.9 52,096 - Ac3H11_934 0.51 +1.2 52,096 - Ac3H11_934 0.51 +1.9 52,575 + Ac3H11_934 0.87 +0.1 52,575 + Ac3H11_934 0.87 -0.1 52,576 - Ac3H11_934 0.87 +0.4 52,576 - Ac3H11_934 0.87 +0.8 52,605 + Ac3H11_934 0.89 +1.5 52,605 + Ac3H11_934 0.89 +0.6 52,605 + Ac3H11_934 0.89 +0.2 52,605 + Ac3H11_934 0.89 +1.5 52,605 + Ac3H11_934 0.89 +2.2 52,606 - Ac3H11_934 0.90 -0.7 52,606 - Ac3H11_934 0.90 +0.3 52,838 + -0.6 52,839 - -0.9 52,843 + -0.1 53,525 + +0.2
Or see this region's nucleotide sequence