Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_907 and Ac3H11_908 are separated by 136 nucleotides Ac3H11_908 and Ac3H11_909 are separated by 56 nucleotides Ac3H11_909 and Ac3H11_910 are separated by 13 nucleotides Ac3H11_910 and Ac3H11_911 are separated by 59 nucleotides
Ac3H11_907 - hypothetical protein, at 21,584 to 21,802
_907
Ac3H11_908 - Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation, at 21,939 to 22,475
_908
Ac3H11_909 - Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25), at 22,532 to 23,656
_909
Ac3H11_910 - Sulfate transport system permease protein CysW, at 23,670 to 24,509
_910
Ac3H11_911 - Sulfate transport system permease protein CysT, at 24,569 to 25,438
_911
Position (kb) 22
23
24 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 21.684 kb on + strand, within Ac3H11_907 at 21.684 kb on + strand, within Ac3H11_907 at 21.685 kb on - strand, within Ac3H11_907 at 21.952 kb on + strand at 22.800 kb on + strand, within Ac3H11_909 at 22.800 kb on + strand, within Ac3H11_909 at 22.801 kb on - strand, within Ac3H11_909 at 22.833 kb on + strand, within Ac3H11_909 at 22.834 kb on - strand, within Ac3H11_909 at 22.956 kb on + strand, within Ac3H11_909 at 23.259 kb on + strand, within Ac3H11_909 at 23.409 kb on + strand, within Ac3H11_909 at 23.410 kb on - strand, within Ac3H11_909 at 23.639 kb on - strand at 23.824 kb on + strand, within Ac3H11_910 at 23.947 kb on + strand, within Ac3H11_910 at 23.947 kb on + strand, within Ac3H11_910 at 23.948 kb on - strand, within Ac3H11_910 at 23.983 kb on + strand, within Ac3H11_910 at 23.983 kb on + strand, within Ac3H11_910 at 23.983 kb on + strand, within Ac3H11_910 at 23.983 kb on + strand, within Ac3H11_910 at 23.984 kb on - strand, within Ac3H11_910 at 23.984 kb on - strand, within Ac3H11_910 at 24.195 kb on + strand, within Ac3H11_910 at 24.195 kb on + strand, within Ac3H11_910 at 24.195 kb on + strand, within Ac3H11_910 at 24.195 kb on + strand, within Ac3H11_910 at 24.195 kb on + strand, within Ac3H11_910 at 24.195 kb on + strand, within Ac3H11_910 at 24.195 kb on + strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.196 kb on - strand, within Ac3H11_910 at 24.199 kb on + strand, within Ac3H11_910 at 24.199 kb on + strand, within Ac3H11_910 at 24.199 kb on + strand, within Ac3H11_910 at 24.199 kb on + strand, within Ac3H11_910 at 24.199 kb on + strand, within Ac3H11_910 at 24.199 kb on + strand, within Ac3H11_910 at 24.199 kb on + strand, within Ac3H11_910 at 24.199 kb on + strand, within Ac3H11_910 at 24.200 kb on - strand, within Ac3H11_910 at 24.200 kb on - strand, within Ac3H11_910 at 24.200 kb on - strand, within Ac3H11_910 at 24.200 kb on - strand, within Ac3H11_910 at 24.200 kb on - strand, within Ac3H11_910 at 24.200 kb on - strand, within Ac3H11_910 at 24.200 kb on - strand, within Ac3H11_910 at 24.200 kb on - strand, within Ac3H11_910 at 24.200 kb on - strand, within Ac3H11_910 at 24.280 kb on + strand, within Ac3H11_910 at 24.281 kb on - strand, within Ac3H11_910 at 24.281 kb on - strand, within Ac3H11_910 at 24.281 kb on - strand, within Ac3H11_910 at 24.403 kb on + strand, within Ac3H11_910 at 24.403 kb on + strand, within Ac3H11_910 at 24.403 kb on + strand, within Ac3H11_910 at 24.502 kb on + strand at 24.503 kb on - strand at 24.503 kb on - strand at 24.656 kb on + strand, within Ac3H11_911
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 21,684 + Ac3H11_907 0.46 -1.3 21,684 + Ac3H11_907 0.46 -0.5 21,685 - Ac3H11_907 0.46 -0.1 21,952 + -0.6 22,800 + Ac3H11_909 0.24 +0.5 22,800 + Ac3H11_909 0.24 -0.1 22,801 - Ac3H11_909 0.24 +0.1 22,833 + Ac3H11_909 0.27 +1.1 22,834 - Ac3H11_909 0.27 -0.7 22,956 + Ac3H11_909 0.38 -0.7 23,259 + Ac3H11_909 0.65 +1.6 23,409 + Ac3H11_909 0.78 +0.1 23,410 - Ac3H11_909 0.78 +0.3 23,639 - +0.1 23,824 + Ac3H11_910 0.18 +1.0 23,947 + Ac3H11_910 0.33 -0.3 23,947 + Ac3H11_910 0.33 +0.1 23,948 - Ac3H11_910 0.33 +0.5 23,983 + Ac3H11_910 0.37 +1.4 23,983 + Ac3H11_910 0.37 +1.1 23,983 + Ac3H11_910 0.37 +1.1 23,983 + Ac3H11_910 0.37 -1.3 23,984 - Ac3H11_910 0.37 +0.0 23,984 - Ac3H11_910 0.37 -0.5 24,195 + Ac3H11_910 0.62 +0.3 24,195 + Ac3H11_910 0.62 -0.6 24,195 + Ac3H11_910 0.62 -0.9 24,195 + Ac3H11_910 0.62 -0.6 24,195 + Ac3H11_910 0.62 -0.4 24,195 + Ac3H11_910 0.62 +0.8 24,195 + Ac3H11_910 0.62 -1.8 24,196 - Ac3H11_910 0.63 -1.3 24,196 - Ac3H11_910 0.63 -1.5 24,196 - Ac3H11_910 0.63 +0.4 24,196 - Ac3H11_910 0.63 +2.7 24,196 - Ac3H11_910 0.63 -0.8 24,196 - Ac3H11_910 0.63 -0.0 24,196 - Ac3H11_910 0.63 +0.3 24,196 - Ac3H11_910 0.63 +0.8 24,196 - Ac3H11_910 0.63 +0.3 24,196 - Ac3H11_910 0.63 +1.9 24,196 - Ac3H11_910 0.63 -0.5 24,196 - Ac3H11_910 0.63 +0.7 24,196 - Ac3H11_910 0.63 +0.9 24,196 - Ac3H11_910 0.63 +1.1 24,199 + Ac3H11_910 0.63 -0.1 24,199 + Ac3H11_910 0.63 +1.3 24,199 + Ac3H11_910 0.63 +0.9 24,199 + Ac3H11_910 0.63 +1.9 24,199 + Ac3H11_910 0.63 +0.2 24,199 + Ac3H11_910 0.63 -0.0 24,199 + Ac3H11_910 0.63 -0.4 24,199 + Ac3H11_910 0.63 -1.5 24,200 - Ac3H11_910 0.63 -0.2 24,200 - Ac3H11_910 0.63 +0.8 24,200 - Ac3H11_910 0.63 -1.2 24,200 - Ac3H11_910 0.63 -0.7 24,200 - Ac3H11_910 0.63 +1.9 24,200 - Ac3H11_910 0.63 -3.0 24,200 - Ac3H11_910 0.63 +2.0 24,200 - Ac3H11_910 0.63 +0.1 24,200 - Ac3H11_910 0.63 +0.5 24,280 + Ac3H11_910 0.73 +0.2 24,281 - Ac3H11_910 0.73 +0.7 24,281 - Ac3H11_910 0.73 -0.5 24,281 - Ac3H11_910 0.73 -0.7 24,403 + Ac3H11_910 0.87 +0.5 24,403 + Ac3H11_910 0.87 +1.1 24,403 + Ac3H11_910 0.87 +1.1 24,502 + -0.5 24,503 - +1.2 24,503 - -1.1 24,656 + Ac3H11_911 0.10 +0.2
Or see this region's nucleotide sequence