Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_904 and Ac3H11_905 are separated by 90 nucleotides Ac3H11_905 and Ac3H11_906 overlap by 4 nucleotides Ac3H11_906 and Ac3H11_907 are separated by 154 nucleotides
Ac3H11_904 - Chemotactic transducer-related protein, at 18,017 to 19,645
_904
Ac3H11_905 - Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup, at 19,736 to 20,737
_905
Ac3H11_906 - Glutathione S-transferase domain protein, at 20,734 to 21,429
_906
Ac3H11_907 - hypothetical protein, at 21,584 to 21,802
_907
Position (kb) 19
20
21 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.861 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.938 kb on - strand, within Ac3H11_904 at 18.938 kb on - strand, within Ac3H11_904 at 18.975 kb on + strand, within Ac3H11_904 at 19.290 kb on + strand, within Ac3H11_904 at 19.291 kb on - strand, within Ac3H11_904 at 19.406 kb on - strand, within Ac3H11_904 at 19.406 kb on - strand, within Ac3H11_904 at 19.491 kb on + strand at 19.492 kb on - strand at 19.492 kb on - strand at 19.645 kb on + strand at 19.645 kb on + strand at 19.645 kb on + strand at 19.646 kb on - strand at 19.646 kb on - strand at 19.701 kb on + strand at 19.701 kb on + strand at 19.701 kb on + strand at 19.701 kb on + strand at 19.701 kb on + strand at 20.001 kb on - strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.153 kb on + strand, within Ac3H11_905 at 20.154 kb on - strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.382 kb on - strand, within Ac3H11_905 at 20.382 kb on - strand, within Ac3H11_905 at 20.540 kb on + strand, within Ac3H11_905 at 20.540 kb on + strand, within Ac3H11_905 at 20.540 kb on + strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.755 kb on + strand at 20.755 kb on + strand at 20.755 kb on + strand at 20.755 kb on + strand at 20.755 kb on + strand at 20.756 kb on - strand at 20.756 kb on - strand at 20.756 kb on - strand at 20.776 kb on + strand at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.684 kb on + strand, within Ac3H11_907 at 21.684 kb on + strand, within Ac3H11_907 at 21.685 kb on - strand, within Ac3H11_907
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 18,768 + Ac3H11_904 0.46 -0.3 18,768 + Ac3H11_904 0.46 -1.8 18,768 + Ac3H11_904 0.46 -1.1 18,768 + Ac3H11_904 0.46 -1.7 18,768 + Ac3H11_904 0.46 +1.3 18,768 + Ac3H11_904 0.46 -0.5 18,768 + Ac3H11_904 0.46 +1.0 18,769 - Ac3H11_904 0.46 +3.0 18,769 - Ac3H11_904 0.46 -0.0 18,769 - Ac3H11_904 0.46 -0.7 18,769 - Ac3H11_904 0.46 +1.5 18,769 - Ac3H11_904 0.46 -0.9 18,861 + Ac3H11_904 0.52 -1.9 18,937 + Ac3H11_904 0.56 -0.9 18,937 + Ac3H11_904 0.56 +0.9 18,937 + Ac3H11_904 0.56 -0.3 18,937 + Ac3H11_904 0.56 +0.5 18,937 + Ac3H11_904 0.56 -1.9 18,938 - Ac3H11_904 0.57 +4.2 18,938 - Ac3H11_904 0.57 -1.3 18,975 + Ac3H11_904 0.59 -1.5 19,290 + Ac3H11_904 0.78 -0.9 19,291 - Ac3H11_904 0.78 -0.0 19,406 - Ac3H11_904 0.85 -0.1 19,406 - Ac3H11_904 0.85 -0.5 19,491 + +0.3 19,492 - -0.8 19,492 - +1.2 19,645 + -0.5 19,645 + +0.4 19,645 + +1.4 19,646 - +0.2 19,646 - +1.0 19,701 + +0.5 19,701 + +1.5 19,701 + -0.3 19,701 + -0.2 19,701 + -1.2 20,001 - Ac3H11_905 0.26 +0.5 20,081 + Ac3H11_905 0.34 +0.2 20,081 + Ac3H11_905 0.34 -0.3 20,081 + Ac3H11_905 0.34 +0.1 20,081 + Ac3H11_905 0.34 +0.4 20,081 + Ac3H11_905 0.34 -0.1 20,081 + Ac3H11_905 0.34 +0.8 20,081 + Ac3H11_905 0.34 +1.5 20,082 - Ac3H11_905 0.35 -1.3 20,082 - Ac3H11_905 0.35 +1.3 20,082 - Ac3H11_905 0.35 +0.4 20,082 - Ac3H11_905 0.35 -0.7 20,082 - Ac3H11_905 0.35 +0.1 20,153 + Ac3H11_905 0.42 -2.7 20,154 - Ac3H11_905 0.42 +0.5 20,354 + Ac3H11_905 0.62 -1.2 20,354 + Ac3H11_905 0.62 +1.5 20,354 + Ac3H11_905 0.62 -0.0 20,354 + Ac3H11_905 0.62 +0.9 20,354 + Ac3H11_905 0.62 +0.6 20,354 + Ac3H11_905 0.62 +0.7 20,354 + Ac3H11_905 0.62 +1.1 20,354 + Ac3H11_905 0.62 +0.5 20,354 + Ac3H11_905 0.62 +2.3 20,354 + Ac3H11_905 0.62 +1.0 20,354 + Ac3H11_905 0.62 -0.9 20,355 - Ac3H11_905 0.62 -0.1 20,355 - Ac3H11_905 0.62 +0.1 20,355 - Ac3H11_905 0.62 -0.3 20,355 - Ac3H11_905 0.62 -0.5 20,355 - Ac3H11_905 0.62 -0.3 20,355 - Ac3H11_905 0.62 -0.2 20,355 - Ac3H11_905 0.62 +0.4 20,355 - Ac3H11_905 0.62 +0.9 20,381 + Ac3H11_905 0.64 -1.0 20,381 + Ac3H11_905 0.64 -1.3 20,381 + Ac3H11_905 0.64 +0.1 20,381 + Ac3H11_905 0.64 +1.2 20,382 - Ac3H11_905 0.64 +0.5 20,382 - Ac3H11_905 0.64 +0.8 20,540 + Ac3H11_905 0.80 +0.9 20,540 + Ac3H11_905 0.80 +0.3 20,540 + Ac3H11_905 0.80 -1.7 20,541 - Ac3H11_905 0.80 -0.7 20,541 - Ac3H11_905 0.80 +1.9 20,541 - Ac3H11_905 0.80 -1.1 20,541 - Ac3H11_905 0.80 -0.8 20,541 - Ac3H11_905 0.80 +0.7 20,755 + -1.0 20,755 + -0.3 20,755 + -0.3 20,755 + +0.8 20,755 + +0.3 20,756 - -1.3 20,756 - -0.9 20,756 - -0.2 20,776 + -0.2 21,069 + Ac3H11_906 0.48 -1.0 21,069 + Ac3H11_906 0.48 -1.8 21,069 + Ac3H11_906 0.48 +0.7 21,069 + Ac3H11_906 0.48 +0.2 21,069 + Ac3H11_906 0.48 -0.6 21,069 + Ac3H11_906 0.48 -1.6 21,069 + Ac3H11_906 0.48 -0.8 21,069 + Ac3H11_906 0.48 -0.2 21,069 + Ac3H11_906 0.48 -1.3 21,069 + Ac3H11_906 0.48 -0.5 21,070 - Ac3H11_906 0.48 +1.0 21,070 - Ac3H11_906 0.48 +0.1 21,070 - Ac3H11_906 0.48 -0.5 21,070 - Ac3H11_906 0.48 -1.5 21,070 - Ac3H11_906 0.48 +1.5 21,070 - Ac3H11_906 0.48 -0.1 21,070 - Ac3H11_906 0.48 -2.1 21,684 + Ac3H11_907 0.46 -1.3 21,684 + Ac3H11_907 0.46 -0.5 21,685 - Ac3H11_907 0.46 -0.1
Or see this region's nucleotide sequence