Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_903 and Ac3H11_904 are separated by 183 nucleotides Ac3H11_904 and Ac3H11_905 are separated by 90 nucleotides
Ac3H11_903 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 14,804 to 17,833
_903
Ac3H11_904 - Chemotactic transducer-related protein, at 18,017 to 19,645
_904
Ac3H11_905 - Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup, at 19,736 to 20,737
_905
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 17.226 kb on + strand, within Ac3H11_903 at 17.226 kb on + strand, within Ac3H11_903 at 17.293 kb on - strand, within Ac3H11_903 at 17.349 kb on + strand, within Ac3H11_903 at 17.349 kb on + strand, within Ac3H11_903 at 17.350 kb on - strand, within Ac3H11_903 at 17.350 kb on - strand, within Ac3H11_903 at 17.382 kb on + strand, within Ac3H11_903 at 17.382 kb on + strand, within Ac3H11_903 at 17.382 kb on + strand, within Ac3H11_903 at 17.382 kb on + strand, within Ac3H11_903 at 17.383 kb on - strand, within Ac3H11_903 at 17.383 kb on - strand, within Ac3H11_903 at 17.436 kb on + strand, within Ac3H11_903 at 17.436 kb on + strand, within Ac3H11_903 at 17.436 kb on + strand, within Ac3H11_903 at 17.437 kb on - strand, within Ac3H11_903 at 17.496 kb on + strand, within Ac3H11_903 at 17.496 kb on + strand, within Ac3H11_903 at 17.497 kb on - strand, within Ac3H11_903 at 17.668 kb on + strand at 17.760 kb on + strand at 17.760 kb on + strand at 17.760 kb on + strand at 17.760 kb on + strand at 17.839 kb on + strand at 17.840 kb on - strand at 18.019 kb on - strand at 18.019 kb on - strand at 18.019 kb on - strand at 18.090 kb on + strand at 18.090 kb on + strand at 18.090 kb on + strand at 18.091 kb on - strand at 18.091 kb on - strand at 18.091 kb on - strand at 18.091 kb on - strand at 18.199 kb on - strand, within Ac3H11_904 at 18.199 kb on - strand, within Ac3H11_904 at 18.199 kb on - strand, within Ac3H11_904 at 18.333 kb on + strand, within Ac3H11_904 at 18.334 kb on - strand, within Ac3H11_904 at 18.405 kb on + strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.861 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.937 kb on + strand, within Ac3H11_904 at 18.938 kb on - strand, within Ac3H11_904 at 18.938 kb on - strand, within Ac3H11_904 at 18.975 kb on + strand, within Ac3H11_904 at 19.290 kb on + strand, within Ac3H11_904 at 19.291 kb on - strand, within Ac3H11_904 at 19.406 kb on - strand, within Ac3H11_904 at 19.406 kb on - strand, within Ac3H11_904 at 19.491 kb on + strand at 19.492 kb on - strand at 19.492 kb on - strand at 19.645 kb on + strand at 19.645 kb on + strand at 19.645 kb on + strand at 19.646 kb on - strand at 19.646 kb on - strand at 19.701 kb on + strand at 19.701 kb on + strand at 19.701 kb on + strand at 19.701 kb on + strand at 19.701 kb on + strand at 20.001 kb on - strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.081 kb on + strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.082 kb on - strand, within Ac3H11_905 at 20.153 kb on + strand, within Ac3H11_905 at 20.154 kb on - strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.354 kb on + strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.355 kb on - strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.381 kb on + strand, within Ac3H11_905 at 20.382 kb on - strand, within Ac3H11_905 at 20.382 kb on - strand, within Ac3H11_905 at 20.540 kb on + strand, within Ac3H11_905 at 20.540 kb on + strand, within Ac3H11_905 at 20.540 kb on + strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905 at 20.541 kb on - strand, within Ac3H11_905
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 17,226 + Ac3H11_903 0.80 -0.6 17,226 + Ac3H11_903 0.80 -0.9 17,293 - Ac3H11_903 0.82 -0.6 17,349 + Ac3H11_903 0.84 +0.1 17,349 + Ac3H11_903 0.84 -0.8 17,350 - Ac3H11_903 0.84 +0.1 17,350 - Ac3H11_903 0.84 +0.1 17,382 + Ac3H11_903 0.85 +0.5 17,382 + Ac3H11_903 0.85 -0.8 17,382 + Ac3H11_903 0.85 +0.7 17,382 + Ac3H11_903 0.85 +0.3 17,383 - Ac3H11_903 0.85 +0.0 17,383 - Ac3H11_903 0.85 +0.4 17,436 + Ac3H11_903 0.87 -2.1 17,436 + Ac3H11_903 0.87 -0.3 17,436 + Ac3H11_903 0.87 -0.4 17,437 - Ac3H11_903 0.87 -0.9 17,496 + Ac3H11_903 0.89 +1.9 17,496 + Ac3H11_903 0.89 -0.0 17,497 - Ac3H11_903 0.89 -0.6 17,668 + -0.2 17,760 + -0.2 17,760 + -0.2 17,760 + -0.1 17,760 + +0.2 17,839 + +0.1 17,840 - +0.3 18,019 - +0.9 18,019 - +0.9 18,019 - -0.5 18,090 + -0.1 18,090 + +0.0 18,090 + -0.9 18,091 - +0.2 18,091 - +0.5 18,091 - -0.5 18,091 - +0.6 18,199 - Ac3H11_904 0.11 +1.7 18,199 - Ac3H11_904 0.11 -1.3 18,199 - Ac3H11_904 0.11 -0.2 18,333 + Ac3H11_904 0.19 +0.9 18,334 - Ac3H11_904 0.19 +0.9 18,405 + Ac3H11_904 0.24 +0.8 18,406 - Ac3H11_904 0.24 +0.8 18,406 - Ac3H11_904 0.24 -0.6 18,406 - Ac3H11_904 0.24 +1.3 18,406 - Ac3H11_904 0.24 -2.2 18,406 - Ac3H11_904 0.24 -1.3 18,406 - Ac3H11_904 0.24 -0.0 18,768 + Ac3H11_904 0.46 -0.3 18,768 + Ac3H11_904 0.46 -1.8 18,768 + Ac3H11_904 0.46 -1.1 18,768 + Ac3H11_904 0.46 -1.7 18,768 + Ac3H11_904 0.46 +1.3 18,768 + Ac3H11_904 0.46 -0.5 18,768 + Ac3H11_904 0.46 +1.0 18,769 - Ac3H11_904 0.46 +3.0 18,769 - Ac3H11_904 0.46 -0.0 18,769 - Ac3H11_904 0.46 -0.7 18,769 - Ac3H11_904 0.46 +1.5 18,769 - Ac3H11_904 0.46 -0.9 18,861 + Ac3H11_904 0.52 -1.9 18,937 + Ac3H11_904 0.56 -0.9 18,937 + Ac3H11_904 0.56 +0.9 18,937 + Ac3H11_904 0.56 -0.3 18,937 + Ac3H11_904 0.56 +0.5 18,937 + Ac3H11_904 0.56 -1.9 18,938 - Ac3H11_904 0.57 +4.2 18,938 - Ac3H11_904 0.57 -1.3 18,975 + Ac3H11_904 0.59 -1.5 19,290 + Ac3H11_904 0.78 -0.9 19,291 - Ac3H11_904 0.78 -0.0 19,406 - Ac3H11_904 0.85 -0.1 19,406 - Ac3H11_904 0.85 -0.5 19,491 + +0.3 19,492 - -0.8 19,492 - +1.2 19,645 + -0.5 19,645 + +0.4 19,645 + +1.4 19,646 - +0.2 19,646 - +1.0 19,701 + +0.5 19,701 + +1.5 19,701 + -0.3 19,701 + -0.2 19,701 + -1.2 20,001 - Ac3H11_905 0.26 +0.5 20,081 + Ac3H11_905 0.34 +0.2 20,081 + Ac3H11_905 0.34 -0.3 20,081 + Ac3H11_905 0.34 +0.1 20,081 + Ac3H11_905 0.34 +0.4 20,081 + Ac3H11_905 0.34 -0.1 20,081 + Ac3H11_905 0.34 +0.8 20,081 + Ac3H11_905 0.34 +1.5 20,082 - Ac3H11_905 0.35 -1.3 20,082 - Ac3H11_905 0.35 +1.3 20,082 - Ac3H11_905 0.35 +0.4 20,082 - Ac3H11_905 0.35 -0.7 20,082 - Ac3H11_905 0.35 +0.1 20,153 + Ac3H11_905 0.42 -2.7 20,154 - Ac3H11_905 0.42 +0.5 20,354 + Ac3H11_905 0.62 -1.2 20,354 + Ac3H11_905 0.62 +1.5 20,354 + Ac3H11_905 0.62 -0.0 20,354 + Ac3H11_905 0.62 +0.9 20,354 + Ac3H11_905 0.62 +0.6 20,354 + Ac3H11_905 0.62 +0.7 20,354 + Ac3H11_905 0.62 +1.1 20,354 + Ac3H11_905 0.62 +0.5 20,354 + Ac3H11_905 0.62 +2.3 20,354 + Ac3H11_905 0.62 +1.0 20,354 + Ac3H11_905 0.62 -0.9 20,355 - Ac3H11_905 0.62 -0.1 20,355 - Ac3H11_905 0.62 +0.1 20,355 - Ac3H11_905 0.62 -0.3 20,355 - Ac3H11_905 0.62 -0.5 20,355 - Ac3H11_905 0.62 -0.3 20,355 - Ac3H11_905 0.62 -0.2 20,355 - Ac3H11_905 0.62 +0.4 20,355 - Ac3H11_905 0.62 +0.9 20,381 + Ac3H11_905 0.64 -1.0 20,381 + Ac3H11_905 0.64 -1.3 20,381 + Ac3H11_905 0.64 +0.1 20,381 + Ac3H11_905 0.64 +1.2 20,382 - Ac3H11_905 0.64 +0.5 20,382 - Ac3H11_905 0.64 +0.8 20,540 + Ac3H11_905 0.80 +0.9 20,540 + Ac3H11_905 0.80 +0.3 20,540 + Ac3H11_905 0.80 -1.7 20,541 - Ac3H11_905 0.80 -0.7 20,541 - Ac3H11_905 0.80 +1.9 20,541 - Ac3H11_905 0.80 -1.1 20,541 - Ac3H11_905 0.80 -0.8 20,541 - Ac3H11_905 0.80 +0.7
Or see this region's nucleotide sequence