Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_868 and Ac3H11_869 are separated by 227 nucleotides Ac3H11_869 and Ac3H11_870 are separated by 129 nucleotides Ac3H11_870 and Ac3H11_871 are separated by 18 nucleotides Ac3H11_871 and Ac3H11_872 overlap by 50 nucleotides
Ac3H11_868 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 150,167 to 151,366
_868
Ac3H11_869 - Auxin Efflux Carrier, at 151,594 to 152,547
_869
Ac3H11_870 - RNA-binding protein, at 152,677 to 153,012
_870
Ac3H11_871 - hypothetical protein, at 153,031 to 153,180
_871
Ac3H11_872 - FIG00581907: hypothetical protein, at 153,131 to 153,370
_872
Position (kb) 151
152
153 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.594 kb on - strand, within Ac3H11_868 at 150.701 kb on + strand, within Ac3H11_868 at 150.716 kb on + strand, within Ac3H11_868 at 150.717 kb on - strand, within Ac3H11_868 at 150.845 kb on + strand, within Ac3H11_868 at 150.845 kb on + strand, within Ac3H11_868 at 150.845 kb on + strand, within Ac3H11_868 at 150.845 kb on + strand, within Ac3H11_868 at 150.845 kb on + strand, within Ac3H11_868 at 150.846 kb on - strand, within Ac3H11_868 at 150.846 kb on - strand, within Ac3H11_868 at 150.846 kb on - strand, within Ac3H11_868 at 150.846 kb on - strand, within Ac3H11_868 at 150.846 kb on - strand, within Ac3H11_868 at 150.846 kb on - strand, within Ac3H11_868 at 150.846 kb on - strand, within Ac3H11_868 at 150.851 kb on + strand, within Ac3H11_868 at 150.851 kb on + strand, within Ac3H11_868 at 150.852 kb on - strand, within Ac3H11_868 at 150.852 kb on - strand, within Ac3H11_868 at 150.852 kb on - strand, within Ac3H11_868 at 150.852 kb on - strand, within Ac3H11_868 at 150.852 kb on - strand, within Ac3H11_868 at 150.852 kb on - strand, within Ac3H11_868 at 150.852 kb on - strand, within Ac3H11_868 at 151.049 kb on + strand, within Ac3H11_868 at 151.050 kb on - strand, within Ac3H11_868 at 151.050 kb on - strand, within Ac3H11_868 at 151.115 kb on + strand, within Ac3H11_868 at 151.115 kb on + strand, within Ac3H11_868 at 151.115 kb on + strand, within Ac3H11_868 at 151.115 kb on + strand, within Ac3H11_868 at 151.115 kb on + strand, within Ac3H11_868 at 151.115 kb on + strand, within Ac3H11_868 at 151.115 kb on + strand, within Ac3H11_868 at 151.115 kb on + strand, within Ac3H11_868 at 151.116 kb on - strand, within Ac3H11_868 at 151.116 kb on - strand, within Ac3H11_868 at 151.116 kb on - strand, within Ac3H11_868 at 151.127 kb on + strand, within Ac3H11_868 at 151.127 kb on + strand, within Ac3H11_868 at 151.127 kb on + strand, within Ac3H11_868 at 151.127 kb on + strand, within Ac3H11_868 at 151.127 kb on + strand, within Ac3H11_868 at 151.128 kb on - strand, within Ac3H11_868 at 151.128 kb on - strand, within Ac3H11_868 at 151.128 kb on - strand, within Ac3H11_868 at 151.128 kb on - strand, within Ac3H11_868 at 151.128 kb on - strand, within Ac3H11_868 at 151.128 kb on - strand, within Ac3H11_868 at 151.205 kb on + strand, within Ac3H11_868 at 151.205 kb on + strand, within Ac3H11_868 at 151.205 kb on + strand, within Ac3H11_868 at 151.206 kb on - strand, within Ac3H11_868 at 151.206 kb on - strand, within Ac3H11_868 at 151.206 kb on - strand, within Ac3H11_868 at 151.208 kb on + strand, within Ac3H11_868 at 151.208 kb on + strand, within Ac3H11_868 at 151.208 kb on + strand, within Ac3H11_868 at 151.208 kb on + strand, within Ac3H11_868 at 151.208 kb on + strand, within Ac3H11_868 at 151.208 kb on + strand, within Ac3H11_868 at 151.209 kb on - strand, within Ac3H11_868 at 151.209 kb on - strand, within Ac3H11_868 at 151.209 kb on - strand, within Ac3H11_868 at 151.209 kb on - strand, within Ac3H11_868 at 151.209 kb on - strand, within Ac3H11_868 at 151.226 kb on + strand, within Ac3H11_868 at 151.226 kb on + strand, within Ac3H11_868 at 151.226 kb on + strand, within Ac3H11_868 at 151.226 kb on + strand, within Ac3H11_868 at 151.227 kb on - strand, within Ac3H11_868 at 151.227 kb on - strand, within Ac3H11_868 at 151.319 kb on + strand at 151.418 kb on - strand at 151.418 kb on - strand at 151.426 kb on + strand at 151.426 kb on + strand at 151.427 kb on - strand at 151.427 kb on - strand at 151.427 kb on - strand at 151.452 kb on + strand at 151.452 kb on + strand at 151.452 kb on + strand at 151.452 kb on + strand at 151.452 kb on + strand at 151.453 kb on - strand at 151.453 kb on - strand at 151.453 kb on - strand at 151.453 kb on - strand at 151.453 kb on - strand at 151.456 kb on + strand at 151.456 kb on + strand at 151.456 kb on + strand at 151.499 kb on + strand at 151.586 kb on + strand at 151.586 kb on + strand at 151.586 kb on + strand at 151.586 kb on + strand at 151.586 kb on + strand at 151.586 kb on + strand at 151.587 kb on - strand at 151.714 kb on + strand, within Ac3H11_869 at 151.714 kb on + strand, within Ac3H11_869 at 151.715 kb on - strand, within Ac3H11_869 at 151.715 kb on - strand, within Ac3H11_869 at 151.715 kb on - strand, within Ac3H11_869 at 151.739 kb on - strand, within Ac3H11_869 at 151.739 kb on - strand, within Ac3H11_869 at 151.755 kb on + strand, within Ac3H11_869 at 151.755 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.798 kb on + strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 151.799 kb on - strand, within Ac3H11_869 at 152.284 kb on + strand, within Ac3H11_869 at 152.284 kb on + strand, within Ac3H11_869 at 152.284 kb on + strand, within Ac3H11_869 at 152.284 kb on + strand, within Ac3H11_869 at 152.284 kb on + strand, within Ac3H11_869 at 152.284 kb on + strand, within Ac3H11_869 at 152.285 kb on - strand, within Ac3H11_869 at 152.285 kb on - strand, within Ac3H11_869 at 152.285 kb on - strand, within Ac3H11_869 at 152.611 kb on + strand at 152.612 kb on - strand at 152.612 kb on - strand at 152.670 kb on - strand at 152.682 kb on - strand at 152.742 kb on - strand, within Ac3H11_870 at 152.978 kb on + strand, within Ac3H11_870 at 152.978 kb on + strand, within Ac3H11_870 at 152.978 kb on + strand, within Ac3H11_870 at 152.979 kb on - strand at 152.979 kb on - strand at 152.996 kb on + strand at 152.996 kb on + strand at 152.996 kb on + strand at 152.996 kb on + strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 152.997 kb on - strand at 153.027 kb on - strand at 153.243 kb on + strand, within Ac3H11_872 at 153.243 kb on + strand, within Ac3H11_872 at 153.243 kb on + strand, within Ac3H11_872 at 153.243 kb on + strand, within Ac3H11_872 at 153.243 kb on + strand, within Ac3H11_872 at 153.243 kb on + strand, within Ac3H11_872 at 153.244 kb on - strand, within Ac3H11_872 at 153.244 kb on - strand, within Ac3H11_872 at 153.244 kb on - strand, within Ac3H11_872 at 153.244 kb on - strand, within Ac3H11_872 at 153.244 kb on - strand, within Ac3H11_872 at 153.244 kb on - strand, within Ac3H11_872 at 153.330 kb on + strand, within Ac3H11_872 at 153.330 kb on + strand, within Ac3H11_872 at 153.330 kb on + strand, within Ac3H11_872 at 153.330 kb on + strand, within Ac3H11_872 at 153.330 kb on + strand, within Ac3H11_872 at 153.331 kb on - strand, within Ac3H11_872 at 153.331 kb on - strand, within Ac3H11_872 at 153.331 kb on - strand, within Ac3H11_872 at 153.331 kb on - strand, within Ac3H11_872 at 153.434 kb on + strand at 153.434 kb on + strand at 153.435 kb on - strand at 153.435 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 150,594 - Ac3H11_868 0.36 +1.2 150,594 - Ac3H11_868 0.36 +0.1 150,594 - Ac3H11_868 0.36 +0.9 150,594 - Ac3H11_868 0.36 -1.7 150,594 - Ac3H11_868 0.36 -0.8 150,594 - Ac3H11_868 0.36 -2.7 150,594 - Ac3H11_868 0.36 +0.1 150,594 - Ac3H11_868 0.36 -1.0 150,594 - Ac3H11_868 0.36 +0.5 150,594 - Ac3H11_868 0.36 +0.0 150,594 - Ac3H11_868 0.36 -1.1 150,701 + Ac3H11_868 0.45 -0.2 150,716 + Ac3H11_868 0.46 -1.2 150,717 - Ac3H11_868 0.46 +0.7 150,845 + Ac3H11_868 0.56 -0.9 150,845 + Ac3H11_868 0.56 +0.0 150,845 + Ac3H11_868 0.56 +1.3 150,845 + Ac3H11_868 0.56 +1.6 150,845 + Ac3H11_868 0.56 -0.4 150,846 - Ac3H11_868 0.57 -0.2 150,846 - Ac3H11_868 0.57 +0.6 150,846 - Ac3H11_868 0.57 -1.5 150,846 - Ac3H11_868 0.57 +0.8 150,846 - Ac3H11_868 0.57 +0.8 150,846 - Ac3H11_868 0.57 +0.3 150,846 - Ac3H11_868 0.57 +2.0 150,851 + Ac3H11_868 0.57 -1.0 150,851 + Ac3H11_868 0.57 +0.3 150,852 - Ac3H11_868 0.57 +0.0 150,852 - Ac3H11_868 0.57 +5.1 150,852 - Ac3H11_868 0.57 +0.8 150,852 - Ac3H11_868 0.57 +0.2 150,852 - Ac3H11_868 0.57 -0.9 150,852 - Ac3H11_868 0.57 -0.6 150,852 - Ac3H11_868 0.57 +0.1 151,049 + Ac3H11_868 0.73 -0.3 151,050 - Ac3H11_868 0.74 +0.9 151,050 - Ac3H11_868 0.74 -0.6 151,115 + Ac3H11_868 0.79 -0.4 151,115 + Ac3H11_868 0.79 +0.2 151,115 + Ac3H11_868 0.79 -0.6 151,115 + Ac3H11_868 0.79 -0.0 151,115 + Ac3H11_868 0.79 -0.6 151,115 + Ac3H11_868 0.79 -0.1 151,115 + Ac3H11_868 0.79 -0.3 151,115 + Ac3H11_868 0.79 +0.8 151,116 - Ac3H11_868 0.79 +1.5 151,116 - Ac3H11_868 0.79 +0.8 151,116 - Ac3H11_868 0.79 +0.6 151,127 + Ac3H11_868 0.80 +0.2 151,127 + Ac3H11_868 0.80 -0.6 151,127 + Ac3H11_868 0.80 +0.2 151,127 + Ac3H11_868 0.80 -0.9 151,127 + Ac3H11_868 0.80 -0.9 151,128 - Ac3H11_868 0.80 -1.6 151,128 - Ac3H11_868 0.80 -1.0 151,128 - Ac3H11_868 0.80 +0.0 151,128 - Ac3H11_868 0.80 -0.9 151,128 - Ac3H11_868 0.80 -1.5 151,128 - Ac3H11_868 0.80 +0.1 151,205 + Ac3H11_868 0.86 +1.1 151,205 + Ac3H11_868 0.86 -1.1 151,205 + Ac3H11_868 0.86 -0.5 151,206 - Ac3H11_868 0.87 -0.7 151,206 - Ac3H11_868 0.87 +0.3 151,206 - Ac3H11_868 0.87 -1.5 151,208 + Ac3H11_868 0.87 +0.4 151,208 + Ac3H11_868 0.87 -0.2 151,208 + Ac3H11_868 0.87 +0.2 151,208 + Ac3H11_868 0.87 +0.3 151,208 + Ac3H11_868 0.87 +1.0 151,208 + Ac3H11_868 0.87 -2.2 151,209 - Ac3H11_868 0.87 +0.0 151,209 - Ac3H11_868 0.87 +0.9 151,209 - Ac3H11_868 0.87 -0.0 151,209 - Ac3H11_868 0.87 -1.1 151,209 - Ac3H11_868 0.87 -0.4 151,226 + Ac3H11_868 0.88 -0.5 151,226 + Ac3H11_868 0.88 -0.7 151,226 + Ac3H11_868 0.88 +0.9 151,226 + Ac3H11_868 0.88 -0.6 151,227 - Ac3H11_868 0.88 +1.1 151,227 - Ac3H11_868 0.88 -0.0 151,319 + -1.3 151,418 - +0.2 151,418 - +1.5 151,426 + -0.4 151,426 + +0.1 151,427 - +0.6 151,427 - -0.1 151,427 - -1.0 151,452 + -0.4 151,452 + +0.7 151,452 + +1.4 151,452 + -0.9 151,452 + +1.5 151,453 - -0.9 151,453 - -0.6 151,453 - -0.1 151,453 - +0.1 151,453 - -1.0 151,456 + -0.8 151,456 + +0.1 151,456 + -1.3 151,499 + +0.4 151,586 + -0.3 151,586 + +0.5 151,586 + -0.7 151,586 + -0.8 151,586 + -0.1 151,586 + +0.5 151,587 - -0.0 151,714 + Ac3H11_869 0.13 -0.6 151,714 + Ac3H11_869 0.13 +0.7 151,715 - Ac3H11_869 0.13 -0.4 151,715 - Ac3H11_869 0.13 +0.5 151,715 - Ac3H11_869 0.13 -0.3 151,739 - Ac3H11_869 0.15 -0.3 151,739 - Ac3H11_869 0.15 -0.0 151,755 + Ac3H11_869 0.17 -0.4 151,755 + Ac3H11_869 0.17 -1.4 151,798 + Ac3H11_869 0.21 -0.3 151,798 + Ac3H11_869 0.21 +0.5 151,798 + Ac3H11_869 0.21 +0.8 151,798 + Ac3H11_869 0.21 -0.1 151,798 + Ac3H11_869 0.21 +0.6 151,798 + Ac3H11_869 0.21 -0.4 151,798 + Ac3H11_869 0.21 -1.5 151,798 + Ac3H11_869 0.21 +0.7 151,798 + Ac3H11_869 0.21 +0.1 151,798 + Ac3H11_869 0.21 +0.1 151,798 + Ac3H11_869 0.21 +0.6 151,798 + Ac3H11_869 0.21 +1.2 151,798 + Ac3H11_869 0.21 +1.9 151,798 + Ac3H11_869 0.21 -0.1 151,798 + Ac3H11_869 0.21 -0.6 151,798 + Ac3H11_869 0.21 -0.9 151,798 + Ac3H11_869 0.21 +0.6 151,798 + Ac3H11_869 0.21 -0.3 151,798 + Ac3H11_869 0.21 -0.4 151,798 + Ac3H11_869 0.21 -1.7 151,798 + Ac3H11_869 0.21 -1.6 151,798 + Ac3H11_869 0.21 -1.3 151,798 + Ac3H11_869 0.21 -0.4 151,798 + Ac3H11_869 0.21 +1.7 151,799 - Ac3H11_869 0.21 +0.8 151,799 - Ac3H11_869 0.21 -0.8 151,799 - Ac3H11_869 0.21 +0.3 151,799 - Ac3H11_869 0.21 -0.5 151,799 - Ac3H11_869 0.21 -0.2 151,799 - Ac3H11_869 0.21 +0.3 151,799 - Ac3H11_869 0.21 -0.0 151,799 - Ac3H11_869 0.21 +0.3 151,799 - Ac3H11_869 0.21 -0.1 151,799 - Ac3H11_869 0.21 -2.9 151,799 - Ac3H11_869 0.21 +0.3 151,799 - Ac3H11_869 0.21 -0.8 151,799 - Ac3H11_869 0.21 +0.5 151,799 - Ac3H11_869 0.21 -0.4 151,799 - Ac3H11_869 0.21 +0.0 151,799 - Ac3H11_869 0.21 +0.5 151,799 - Ac3H11_869 0.21 +0.2 151,799 - Ac3H11_869 0.21 +0.5 151,799 - Ac3H11_869 0.21 -1.0 151,799 - Ac3H11_869 0.21 -2.2 151,799 - Ac3H11_869 0.21 +0.7 151,799 - Ac3H11_869 0.21 -0.5 151,799 - Ac3H11_869 0.21 +0.7 151,799 - Ac3H11_869 0.21 +0.3 151,799 - Ac3H11_869 0.21 +0.1 151,799 - Ac3H11_869 0.21 +1.1 151,799 - Ac3H11_869 0.21 +1.8 151,799 - Ac3H11_869 0.21 +0.2 151,799 - Ac3H11_869 0.21 -1.8 151,799 - Ac3H11_869 0.21 -0.3 151,799 - Ac3H11_869 0.21 +0.2 151,799 - Ac3H11_869 0.21 +1.8 152,284 + Ac3H11_869 0.72 -0.0 152,284 + Ac3H11_869 0.72 -2.0 152,284 + Ac3H11_869 0.72 -0.1 152,284 + Ac3H11_869 0.72 +1.2 152,284 + Ac3H11_869 0.72 -0.1 152,284 + Ac3H11_869 0.72 +0.2 152,285 - Ac3H11_869 0.72 -0.0 152,285 - Ac3H11_869 0.72 -1.1 152,285 - Ac3H11_869 0.72 -0.6 152,611 + -0.1 152,612 - -1.1 152,612 - -0.1 152,670 - -0.9 152,682 - -0.5 152,742 - Ac3H11_870 0.19 -0.9 152,978 + Ac3H11_870 0.90 -0.7 152,978 + Ac3H11_870 0.90 +5.1 152,978 + Ac3H11_870 0.90 -0.7 152,979 - -0.5 152,979 - +1.0 152,996 + -0.1 152,996 + +0.6 152,996 + +3.0 152,996 + +0.5 152,997 - -0.0 152,997 - -3.0 152,997 - +0.2 152,997 - -0.5 152,997 - -0.9 152,997 - +0.4 152,997 - -0.7 152,997 - -0.0 152,997 - +0.6 152,997 - -0.0 152,997 - -0.9 152,997 - +0.3 153,027 - -0.5 153,243 + Ac3H11_872 0.47 +1.0 153,243 + Ac3H11_872 0.47 -0.7 153,243 + Ac3H11_872 0.47 -1.3 153,243 + Ac3H11_872 0.47 +0.4 153,243 + Ac3H11_872 0.47 -0.5 153,243 + Ac3H11_872 0.47 +0.9 153,244 - Ac3H11_872 0.47 -1.2 153,244 - Ac3H11_872 0.47 +0.9 153,244 - Ac3H11_872 0.47 +0.1 153,244 - Ac3H11_872 0.47 +0.2 153,244 - Ac3H11_872 0.47 +0.1 153,244 - Ac3H11_872 0.47 +0.7 153,330 + Ac3H11_872 0.83 +0.5 153,330 + Ac3H11_872 0.83 +0.9 153,330 + Ac3H11_872 0.83 +0.0 153,330 + Ac3H11_872 0.83 +1.4 153,330 + Ac3H11_872 0.83 -0.3 153,331 - Ac3H11_872 0.83 -0.8 153,331 - Ac3H11_872 0.83 -0.1 153,331 - Ac3H11_872 0.83 -0.0 153,331 - Ac3H11_872 0.83 -0.6 153,434 + +0.6 153,434 + +0.4 153,435 - -0.1 153,435 - +0.4
Or see this region's nucleotide sequence