Experiment: phage 93.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_448 and Ac3H11_449 are separated by 398 nucleotides Ac3H11_449 and Ac3H11_450 overlap by 1 nucleotides Ac3H11_450 and Ac3H11_451 overlap by 4 nucleotides
Ac3H11_448 - Sensory box/GGDEF family protein, at 135,698 to 138,649
_448
Ac3H11_449 - Putative hemolysin, at 139,048 to 139,689
_449
Ac3H11_450 - Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54) homolog, at 139,689 to 140,561
_450
Ac3H11_451 - Glycosyltransferase, at 140,558 to 141,649
_451
Position (kb) 139
140 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 138.102 kb on + strand, within Ac3H11_448 at 138.102 kb on + strand, within Ac3H11_448 at 138.102 kb on + strand, within Ac3H11_448 at 138.102 kb on + strand, within Ac3H11_448 at 138.102 kb on + strand, within Ac3H11_448 at 138.102 kb on + strand, within Ac3H11_448 at 138.102 kb on + strand, within Ac3H11_448 at 138.103 kb on - strand, within Ac3H11_448 at 138.103 kb on - strand, within Ac3H11_448 at 138.103 kb on - strand, within Ac3H11_448 at 138.103 kb on - strand, within Ac3H11_448 at 138.103 kb on - strand, within Ac3H11_448 at 138.103 kb on - strand, within Ac3H11_448 at 138.147 kb on + strand, within Ac3H11_448 at 138.147 kb on + strand, within Ac3H11_448 at 138.147 kb on + strand, within Ac3H11_448 at 138.148 kb on - strand, within Ac3H11_448 at 138.148 kb on - strand, within Ac3H11_448 at 138.188 kb on + strand, within Ac3H11_448 at 138.188 kb on + strand, within Ac3H11_448 at 138.188 kb on + strand, within Ac3H11_448 at 138.188 kb on + strand, within Ac3H11_448 at 138.188 kb on + strand, within Ac3H11_448 at 138.188 kb on + strand, within Ac3H11_448 at 138.188 kb on + strand, within Ac3H11_448 at 138.189 kb on - strand, within Ac3H11_448 at 138.189 kb on - strand, within Ac3H11_448 at 138.189 kb on - strand, within Ac3H11_448 at 138.189 kb on - strand, within Ac3H11_448 at 138.189 kb on - strand, within Ac3H11_448 at 138.320 kb on + strand, within Ac3H11_448 at 138.320 kb on + strand, within Ac3H11_448 at 138.320 kb on + strand, within Ac3H11_448 at 138.321 kb on - strand, within Ac3H11_448 at 138.321 kb on - strand, within Ac3H11_448 at 138.363 kb on + strand at 138.364 kb on - strand at 138.364 kb on - strand at 138.434 kb on + strand at 138.435 kb on - strand at 138.520 kb on + strand at 138.520 kb on + strand at 138.521 kb on - strand at 138.521 kb on - strand at 138.673 kb on - strand at 138.673 kb on - strand at 138.693 kb on + strand at 138.693 kb on + strand at 138.693 kb on + strand at 138.693 kb on + strand at 138.694 kb on - strand at 138.694 kb on - strand at 139.160 kb on - strand, within Ac3H11_449 at 139.205 kb on - strand, within Ac3H11_449 at 139.205 kb on - strand, within Ac3H11_449 at 139.205 kb on - strand, within Ac3H11_449 at 139.205 kb on - strand, within Ac3H11_449 at 139.445 kb on + strand, within Ac3H11_449 at 139.446 kb on - strand, within Ac3H11_449 at 139.446 kb on - strand, within Ac3H11_449 at 139.475 kb on - strand, within Ac3H11_449 at 139.475 kb on - strand, within Ac3H11_449 at 139.559 kb on - strand, within Ac3H11_449 at 139.890 kb on + strand, within Ac3H11_450 at 139.890 kb on + strand, within Ac3H11_450 at 139.891 kb on - strand, within Ac3H11_450 at 139.891 kb on - strand, within Ac3H11_450 at 140.096 kb on + strand, within Ac3H11_450 at 140.096 kb on + strand, within Ac3H11_450 at 140.097 kb on - strand, within Ac3H11_450 at 140.097 kb on - strand, within Ac3H11_450 at 140.097 kb on - strand, within Ac3H11_450 at 140.097 kb on - strand, within Ac3H11_450 at 140.179 kb on - strand, within Ac3H11_450 at 140.196 kb on + strand, within Ac3H11_450 at 140.197 kb on - strand, within Ac3H11_450 at 140.260 kb on - strand, within Ac3H11_450 at 140.277 kb on + strand, within Ac3H11_450 at 140.277 kb on + strand, within Ac3H11_450 at 140.310 kb on + strand, within Ac3H11_450 at 140.310 kb on + strand, within Ac3H11_450 at 140.310 kb on + strand, within Ac3H11_450 at 140.310 kb on + strand, within Ac3H11_450 at 140.310 kb on + strand, within Ac3H11_450 at 140.310 kb on + strand, within Ac3H11_450 at 140.310 kb on + strand, within Ac3H11_450 at 140.311 kb on - strand, within Ac3H11_450 at 140.311 kb on - strand, within Ac3H11_450 at 140.311 kb on - strand, within Ac3H11_450 at 140.311 kb on - strand, within Ac3H11_450 at 140.311 kb on - strand, within Ac3H11_450 at 140.374 kb on + strand, within Ac3H11_450 at 140.375 kb on - strand, within Ac3H11_450 at 140.375 kb on - strand, within Ac3H11_450 at 140.424 kb on + strand, within Ac3H11_450 at 140.425 kb on - strand, within Ac3H11_450 at 140.425 kb on - strand, within Ac3H11_450
Per-strain Table
Position Strand Gene LocusTag Fraction phage 93.1 remove 138,102 + Ac3H11_448 0.81 -0.4 138,102 + Ac3H11_448 0.81 -0.7 138,102 + Ac3H11_448 0.81 -0.3 138,102 + Ac3H11_448 0.81 -0.3 138,102 + Ac3H11_448 0.81 +1.0 138,102 + Ac3H11_448 0.81 -0.0 138,102 + Ac3H11_448 0.81 +1.6 138,103 - Ac3H11_448 0.81 +0.6 138,103 - Ac3H11_448 0.81 +0.1 138,103 - Ac3H11_448 0.81 -1.4 138,103 - Ac3H11_448 0.81 -0.3 138,103 - Ac3H11_448 0.81 +0.3 138,103 - Ac3H11_448 0.81 +0.4 138,147 + Ac3H11_448 0.83 +0.5 138,147 + Ac3H11_448 0.83 +0.7 138,147 + Ac3H11_448 0.83 -0.3 138,148 - Ac3H11_448 0.83 -0.2 138,148 - Ac3H11_448 0.83 -0.1 138,188 + Ac3H11_448 0.84 +0.8 138,188 + Ac3H11_448 0.84 +2.9 138,188 + Ac3H11_448 0.84 +1.1 138,188 + Ac3H11_448 0.84 +0.7 138,188 + Ac3H11_448 0.84 +0.4 138,188 + Ac3H11_448 0.84 -1.4 138,188 + Ac3H11_448 0.84 -0.1 138,189 - Ac3H11_448 0.84 +0.7 138,189 - Ac3H11_448 0.84 -0.1 138,189 - Ac3H11_448 0.84 +1.1 138,189 - Ac3H11_448 0.84 +0.5 138,189 - Ac3H11_448 0.84 +0.9 138,320 + Ac3H11_448 0.89 +0.6 138,320 + Ac3H11_448 0.89 +0.7 138,320 + Ac3H11_448 0.89 -0.6 138,321 - Ac3H11_448 0.89 +1.1 138,321 - Ac3H11_448 0.89 +0.6 138,363 + -1.0 138,364 - +0.5 138,364 - -1.0 138,434 + -1.1 138,435 - -0.3 138,520 + -0.1 138,520 + -0.3 138,521 - -0.4 138,521 - -0.2 138,673 - +2.2 138,673 - -1.1 138,693 + +0.4 138,693 + -0.4 138,693 + -0.6 138,693 + +0.6 138,694 - +0.9 138,694 - +1.0 139,160 - Ac3H11_449 0.17 +0.6 139,205 - Ac3H11_449 0.24 -0.7 139,205 - Ac3H11_449 0.24 -0.3 139,205 - Ac3H11_449 0.24 -0.9 139,205 - Ac3H11_449 0.24 -0.7 139,445 + Ac3H11_449 0.62 +0.0 139,446 - Ac3H11_449 0.62 +3.7 139,446 - Ac3H11_449 0.62 -0.2 139,475 - Ac3H11_449 0.67 +0.1 139,475 - Ac3H11_449 0.67 -0.2 139,559 - Ac3H11_449 0.80 +0.2 139,890 + Ac3H11_450 0.23 -0.0 139,890 + Ac3H11_450 0.23 +1.5 139,891 - Ac3H11_450 0.23 -0.4 139,891 - Ac3H11_450 0.23 -0.3 140,096 + Ac3H11_450 0.47 -1.6 140,096 + Ac3H11_450 0.47 +0.9 140,097 - Ac3H11_450 0.47 -0.4 140,097 - Ac3H11_450 0.47 -0.6 140,097 - Ac3H11_450 0.47 -0.5 140,097 - Ac3H11_450 0.47 -0.0 140,179 - Ac3H11_450 0.56 -0.1 140,196 + Ac3H11_450 0.58 +0.1 140,197 - Ac3H11_450 0.58 -0.4 140,260 - Ac3H11_450 0.65 +1.0 140,277 + Ac3H11_450 0.67 +0.3 140,277 + Ac3H11_450 0.67 +0.9 140,310 + Ac3H11_450 0.71 +0.1 140,310 + Ac3H11_450 0.71 +0.6 140,310 + Ac3H11_450 0.71 +0.1 140,310 + Ac3H11_450 0.71 +1.1 140,310 + Ac3H11_450 0.71 -0.5 140,310 + Ac3H11_450 0.71 +0.6 140,310 + Ac3H11_450 0.71 +1.1 140,311 - Ac3H11_450 0.71 +0.5 140,311 - Ac3H11_450 0.71 +0.1 140,311 - Ac3H11_450 0.71 +1.9 140,311 - Ac3H11_450 0.71 +0.6 140,311 - Ac3H11_450 0.71 -0.3 140,374 + Ac3H11_450 0.78 +0.2 140,375 - Ac3H11_450 0.79 +0.5 140,375 - Ac3H11_450 0.79 -0.6 140,424 + Ac3H11_450 0.84 -1.8 140,425 - Ac3H11_450 0.84 +0.4 140,425 - Ac3H11_450 0.84 +0.7
Or see this region's nucleotide sequence